RNA–Protein interactions for RNA: YKL018W

SWD2, Transcript of Subunit of the COMPASS (Set1C) histone H3K4 methyltransferase complex, yeast

Gene SWD2, Length 990 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWD2	YKL018W	CRT10	Q08226	957 aa		4.05	□□□□□ -1.76
SWD2	YKL018W	MSH1	P25846	959 aa		4.04	□□□□□ -1.76
SWD2	YKL018W	PET309	P32522	965 aa	Predicted RBP	4.04	□□□□□ -1.76
SWD2	YKL018W	YPT10	P38146	199 aa		4.04	□□□□□ -1.76
SWD2	YKL018W	ERP2	P39704	215 aa		4.04	□□□□□ -1.76
SWD2	YKL018W	VID27	P40157	782 aa		4.04	□□□□□ -1.76
SWD2	YKL018W	IML2	P47031	731 aa		4.04	□□□□□ -1.76
SWD2	YKL018W	BPL1	P48445	690 aa	Predicted RBP	4.04	□□□□□ -1.76
SWD2	YKL018W	YPL071C	Q02864	156 aa		4.04	□□□□□ -1.76
SWD2	YKL018W	SVL3	Q03088	825 aa	Known RBP	4.04	□□□□□ -1.76
SWD2	YKL018W	PRS5	Q12265	496 aa	Known RBP	4.04	□□□□□ -1.76
SWD2	YKL018W	FRE7	Q12333	620 aa		4.04	□□□□□ -1.76
SWD2	YKL018W	MSM1	P22438	575 aa		4.03	□□□□□ -1.76
SWD2	YKL018W	LNP1	P38878	278 aa		4.03	□□□□□ -1.76
SWD2	YKL018W	SCS2	P40075	244 aa	Known RBP	4.03	□□□□□ -1.76
SWD2	YKL018W	IRC5	P43610	853 aa		4.03	□□□□□ -1.76
SWD2	YKL018W	YML131W	Q03102	365 aa		4.03	□□□□□ -1.76
SWD2	YKL018W	BSP1	Q06604	576 aa		4.03	□□□□□ -1.76
SWD2	YKL018W	RDL1	Q12305	139 aa	Known RBP	4.03	□□□□□ -1.76
SWD2	YKL018W	ARP7	Q12406	477 aa		4.03	□□□□□ -1.76
SWD2	YKL018W	GSY2	P27472	705 aa		4.02	□□□□□ -1.77
SWD2	YKL018W	TGL1	P34163	548 aa		4.02	□□□□□ -1.77
SWD2	YKL018W	TAF5	P38129	798 aa		4.02	□□□□□ -1.77
SWD2	YKL018W	MTG2	P38860	518 aa		4.02	□□□□□ -1.77
SWD2	YKL018W	ERR3	P42222	437 aa		4.02	□□□□□ -1.77
SWD2	YKL018W	MOT3	P54785	490 aa	Known RBP	4.02	□□□□□ -1.77
SWD2	YKL018W	GTR1	Q00582	310 aa		4.02	□□□□□ -1.77
SWD2	YKL018W	BLS1	Q06071	122 aa		4.02	□□□□□ -1.77
SWD2	YKL018W	TPO3	Q06451	622 aa		4.02	□□□□□ -1.77
SWD2	YKL018W	BRE1	Q07457	700 aa	Known RBP	4.02	□□□□□ -1.77
SWD2	YKL018W	CBP3	P21560	335 aa		4.01	□□□□□ -1.77
SWD2	YKL018W	APM3	P38153	483 aa		4.01	□□□□□ -1.77
SWD2	YKL018W	SSP120	P39931	234 aa	Known RBP	4.01	□□□□□ -1.77
SWD2	YKL018W	JHD1	P40034	492 aa		4.01	□□□□□ -1.77
SWD2	YKL018W	TDA10	P42938	290 aa		4.01	□□□□□ -1.77
SWD2	YKL018W	MNT2	P53059	558 aa		4.01	□□□□□ -1.77
SWD2	YKL018W	YNL058C	P53947	316 aa		4.01	□□□□□ -1.77
SWD2	YKL018W	IDP3	P53982	420 aa	Known RBP	4.01	□□□□□ -1.77
SWD2	YKL018W	AAT1	Q01802	451 aa		4.01	□□□□□ -1.77
SWD2	YKL018W	COG4	Q06096	861 aa		4.01	□□□□□ -1.77
SWD2	YKL018W	PCL8	Q08966	492 aa		4.01	□□□□□ -1.77
SWD2	YKL018W	SSM4	P40318	1319 aa		4	□□□□□ -1.77
SWD2	YKL018W	VAS1	P07806	1104 aa	Known RBP	4	□□□□□ -1.77
SWD2	YKL018W	ARG1	P22768	420 aa		4	□□□□□ -1.77
SWD2	YKL018W	RPN12	P32496	274 aa		4	□□□□□ -1.77
SWD2	YKL018W	CDC5	P32562	705 aa		4	□□□□□ -1.77
SWD2	YKL018W	SDH8	P38345	138 aa		4	□□□□□ -1.77
SWD2	YKL018W	SWD1	P39706	426 aa		4	□□□□□ -1.77
SWD2	YKL018W	MAD3	P47074	515 aa		4	□□□□□ -1.77
SWD2	YKL018W	RSC9	Q03124	581 aa		4	□□□□□ -1.77
SWD2	YKL018W	YMR018W	Q04364	514 aa		4	□□□□□ -1.77
SWD2	YKL018W	SSP2	Q08646	371 aa		4	□□□□□ -1.77
SWD2	YKL018W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4	□□□□□ -1.77	not detected
SWD2	YKL018W	ADH4	P10127	382 aa		3.99	□□□□□ -1.77
SWD2	YKL018W	RPT2	P40327	437 aa	Known RBP	3.99	□□□□□ -1.77
SWD2	YKL018W	LAS21	P40367	830 aa		3.99	□□□□□ -1.77
SWD2	YKL018W	MNT3	P40549	630 aa		3.99	□□□□□ -1.77
SWD2	YKL018W	BST1	P43571	1029 aa		3.99	□□□□□ -1.77
SWD2	YKL018W	IDS2	P46958	469 aa		3.99	□□□□□ -1.77
SWD2	YKL018W	PUS4	P48567	403 aa	Known RBP	3.99	□□□□□ -1.77
SWD2	YKL018W	SCS3	P53012	380 aa		3.99	□□□□□ -1.77
SWD2	YKL018W	RTK1	Q12100	620 aa	Predicted RBP	3.99	□□□□□ -1.77
SWD2	YKL018W	URA3	P03962	267 aa		3.98	□□□□□ -1.77
SWD2	YKL018W	GFD2	P25370	566 aa	Known RBP	3.98	□□□□□ -1.77
SWD2	YKL018W	PSY4	P38193	441 aa		3.98	□□□□□ -1.77
SWD2	YKL018W	STB5	P38699	743 aa		3.98	□□□□□ -1.77
SWD2	YKL018W	IMA5	P40884	581 aa		3.98	□□□□□ -1.77
SWD2	YKL018W	YFR016C	P43597	1233 aa	Known RBP	3.98	□□□□□ -1.77
SWD2	YKL018W	SAE2	P46946	345 aa		3.98	□□□□□ -1.77
SWD2	YKL018W	COG2	P53271	262 aa		3.98	□□□□□ -1.77
SWD2	YKL018W	SPN1	Q06505	410 aa	Predicted RBP	3.98	□□□□□ -1.77
SWD2	YKL018W	CYK3	Q07533	885 aa		3.98	□□□□□ -1.77
SWD2	YKL018W	GEP3	Q08622	556 aa		3.98	□□□□□ -1.77
SWD2	YKL018W	YOR389W	Q08912	624 aa		3.98	□□□□□ -1.77
SWD2	YKL018W	NEW1	Q08972	1196 aa	Known RBP	3.98	□□□□□ -1.77
SWD2	YKL018W	DBP10	Q12389	995 aa	Known RBP	3.98	□□□□□ -1.77
SWD2	YKL018W	YAP1	P19880	650 aa	Known RBP	3.97	□□□□□ -1.77
SWD2	YKL018W	GDA1	P32621	518 aa		3.97	□□□□□ -1.77
SWD2	YKL018W	SPC97	P38863	823 aa		3.97	□□□□□ -1.77
SWD2	YKL018W	SPC72	P39723	622 aa		3.97	□□□□□ -1.77
SWD2	YKL018W	FAF1	P40546	346 aa	Predicted RBP	3.97	□□□□□ -1.77
SWD2	YKL018W	SMK1	P41808	388 aa		3.97	□□□□□ -1.77
SWD2	YKL018W	IRC7	P43623	340 aa		3.97	□□□□□ -1.77
SWD2	YKL018W	COS12	P53053	380 aa		3.97	□□□□□ -1.77
SWD2	YKL018W	MDG1	P53885	366 aa		3.97	□□□□□ -1.77
SWD2	YKL018W	TRS130	Q03660	1102 aa		3.97	□□□□□ -1.77
SWD2	YKL018W	CIA1	Q05583	330 aa		3.97	□□□□□ -1.77
SWD2	YKL018W	HRD3	Q05787	833 aa		3.97	□□□□□ -1.77
SWD2	YKL018W	CRC1	Q12289	327 aa		3.97	□□□□□ -1.77
SWD2	YKL018W	YLR111W	Q12528	110 aa		3.97	□□□□□ -1.77
SWD2	YKL018W	CTT1	P06115	562 aa		3.96	□□□□□ -1.78
SWD2	YKL018W	YJU2	P28320	278 aa	Predicted RBP	3.96	□□□□□ -1.78
SWD2	YKL018W	CHS3	P29465	1165 aa		3.96	□□□□□ -1.78
SWD2	YKL018W	MCM10	P32354	571 aa		3.96	□□□□□ -1.78
SWD2	YKL018W	YLF2	P38746	405 aa		3.96	□□□□□ -1.78
SWD2	YKL018W	NOC2	P39744	710 aa	Known RBP	3.96	□□□□□ -1.78
SWD2	YKL018W	MAM1	P40065	302 aa		3.96	□□□□□ -1.78
SWD2	YKL018W	MAD2	P40958	196 aa		3.96	□□□□□ -1.78
SWD2	YKL018W	CIR1	P42940	261 aa		3.96	□□□□□ -1.78
SWD2	YKL018W	SCW4	P53334	386 aa	Known RBP	3.96	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms