RNA–Protein interactions for RNA: YJL197W

UBP12, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP12, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP12YJL197W SEC5P89102 971 aa3.98□□□□□ -1.77
UBP12YJL197W OAZ1Q02803 292 aa3.98□□□□□ -1.77
UBP12YJL197W RSM24Q03976 319 aa3.98□□□□□ -1.77
UBP12YJL197W RAD30Q04049 632 aa3.98□□□□□ -1.77
UBP12YJL197W YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.98□□□□□ -1.77not detected
UBP12YJL197W ERG27Q12452 347 aaKnown RBP3.98□□□□□ -1.77
UBP12YJL197W VCX1Q99385 411 aa3.98□□□□□ -1.77
UBP12YJL197W CTT1P06115 562 aa3.97□□□□□ -1.77
UBP12YJL197W MGM1P32266 881 aa3.97□□□□□ -1.77
UBP12YJL197W MAC1P35192 417 aa3.97□□□□□ -1.77
UBP12YJL197W ZRG8P40021 1076 aa3.97□□□□□ -1.77
UBP12YJL197W NGL3Q03210 505 aa3.97□□□□□ -1.77
UBP12YJL197W MGR3Q04472 501 aa3.97□□□□□ -1.77
UBP12YJL197W ASM4Q05166 528 aa3.97□□□□□ -1.77
UBP12YJL197W APL4Q12028 832 aa3.97□□□□□ -1.77
UBP12YJL197W YJR112W-AQ3E743 109 aa3.97□□□□□ -1.77
UBP12YJL197W GCD7P32502 381 aaPredicted RBP3.97□□□□□ -1.77
UBP12YJL197W STB6P36085 766 aa3.97□□□□□ -1.77
UBP12YJL197W LCB2P40970 561 aa3.97□□□□□ -1.77
UBP12YJL197W MMM1P41800 426 aa3.97□□□□□ -1.77
UBP12YJL197W CIT3P43635 486 aa3.97□□□□□ -1.77
UBP12YJL197W GLO1P50107 326 aa3.97□□□□□ -1.77
UBP12YJL197W MUB1Q03162 620 aa3.97□□□□□ -1.77
UBP12YJL197W RIM20Q12033 661 aa3.97□□□□□ -1.77
UBP12YJL197W YLR415CO13578 112 aa3.97□□□□□ -1.77
UBP12YJL197W GLK1P17709 500 aaKnown RBP3.97□□□□□ -1.77
UBP12YJL197W CAP1P28495 268 aaKnown RBP3.97□□□□□ -1.77
UBP12YJL197W APE3P37302 537 aaKnown RBP3.97□□□□□ -1.77
UBP12YJL197W RFC1P38630 861 aaKnown RBP3.97□□□□□ -1.77
UBP12YJL197W YDL183CP48569 320 aa3.97□□□□□ -1.77
UBP12YJL197W PRP43P53131 767 aaKnown RBP3.97□□□□□ -1.77
UBP12YJL197W VPS36Q06696 566 aa3.97□□□□□ -1.77
UBP12YJL197W MLH2Q07980 695 aa3.97□□□□□ -1.77
UBP12YJL197W NFI1Q12216 726 aa3.97□□□□□ -1.77
UBP12YJL197W ATP2P00830 511 aaKnown RBP3.96□□□□□ -1.78
UBP12YJL197W APE1P14904 514 aa3.96□□□□□ -1.78
UBP12YJL197W SUI2P20459 304 aaKnown RBP3.96□□□□□ -1.78
UBP12YJL197W CST26P38226 397 aa3.96□□□□□ -1.78
UBP12YJL197W VID24P38263 362 aa3.96□□□□□ -1.78
UBP12YJL197W SLN1P39928 1220 aaPredicted RBP3.96□□□□□ -1.78
UBP12YJL197W URM1P40554 99 aaPredicted RBP3.96□□□□□ -1.78
UBP12YJL197W NGL2Q03264 515 aaKnown RBP3.96□□□□□ -1.78
UBP12YJL197W RIX7Q07844 837 aaKnown RBP3.96□□□□□ -1.78
UBP12YJL197W POM34Q12445 299 aa3.96□□□□□ -1.78
UBP12YJL197W SEC12P11655 471 aa3.96□□□□□ -1.78
UBP12YJL197W RRP7P25368 297 aaPredicted RBP3.96□□□□□ -1.78
UBP12YJL197W SFB3P38810 929 aa3.96□□□□□ -1.78
UBP12YJL197W SLZ1P40167 298 aa3.96□□□□□ -1.78
UBP12YJL197W YLH47Q06493 454 aa3.96□□□□□ -1.78
UBP12YJL197W ICL2Q12031 575 aa3.96□□□□□ -1.78
UBP12YJL197W PRE10P21242 288 aaKnown RBP RIP-Chip data3.96□□□□□ -1.78not detected
UBP12YJL197W CPR2P23285 205 aa3.96□□□□□ -1.78
UBP12YJL197W ERG8P24521 451 aa3.96□□□□□ -1.78
UBP12YJL197W YCR051WP25631 222 aa3.96□□□□□ -1.78
UBP12YJL197W PSD1P39006 500 aa3.96□□□□□ -1.78
UBP12YJL197W PCL7P40186 285 aa3.96□□□□□ -1.78
UBP12YJL197W MND2P40577 368 aa3.96□□□□□ -1.78
UBP12YJL197W ZAP1P47043 880 aa3.96□□□□□ -1.78
UBP12YJL197W HST1P53685 503 aa3.96□□□□□ -1.78
UBP12YJL197W FDC1Q03034 503 aa3.96□□□□□ -1.78
UBP12YJL197W RSF1Q05043 376 aa3.96□□□□□ -1.78
UBP12YJL197W INO80P53115 1489 aa3.95□□□□□ -1.78
UBP12YJL197W KAR3P17119 729 aa3.95□□□□□ -1.78
UBP12YJL197W CLC1P17891 233 aa3.95□□□□□ -1.78
UBP12YJL197W URA7P28274 579 aaKnown RBP3.95□□□□□ -1.78
UBP12YJL197W EFT1P32324 842 aaKnown RBP3.95□□□□□ -1.78
UBP12YJL197W STE14P32584 239 aa3.95□□□□□ -1.78
UBP12YJL197W ALY1P36117 915 aa3.95□□□□□ -1.78
UBP12YJL197W UBP13P38187 747 aa3.95□□□□□ -1.78
UBP12YJL197W REG2P38232 338 aa3.95□□□□□ -1.78
UBP12YJL197W OTU2P38747 307 aaKnown RBP3.95□□□□□ -1.78
UBP12YJL197W YEL057CP39983 233 aa3.95□□□□□ -1.78
UBP12YJL197W GCV2P49095 1034 aa3.95□□□□□ -1.78
UBP12YJL197W LYS21Q12122 440 aaKnown RBP3.95□□□□□ -1.78
UBP12YJL197W YOL159C-AQ3E769 90 aa3.95□□□□□ -1.78
UBP12YJL197W RPS7AP26786 190 aaKnown RBP3.95□□□□□ -1.78
UBP12YJL197W RTS1P38903 757 aa3.95□□□□□ -1.78
UBP12YJL197W PEX7P39108 375 aa3.95□□□□□ -1.78
UBP12YJL197W SKP2P42843 763 aa3.95□□□□□ -1.78
UBP12YJL197W CCT7P42943 550 aaKnown RBP3.95□□□□□ -1.78
UBP12YJL197W GCR2Q01722 534 aa3.95□□□□□ -1.78
UBP12YJL197W YPL107WQ02873 248 aa3.95□□□□□ -1.78
UBP12YJL197W YAP6Q03935 383 aa3.95□□□□□ -1.78
UBP12YJL197W YEH1Q07804 573 aa3.95□□□□□ -1.78
UBP12YJL197W SED4P25365 1065 aa3.94□□□□□ -1.78
UBP12YJL197W INN1P53901 409 aa3.94□□□□□ -1.78
UBP12YJL197W GRX3Q03835 250 aa3.94□□□□□ -1.78
UBP12YJL197W DPB4Q04603 196 aaKnown RBP3.94□□□□□ -1.78
UBP12YJL197W RQC1Q05468 723 aaKnown RBP3.94□□□□□ -1.78
UBP12YJL197W GPB1Q08886 897 aa3.94□□□□□ -1.78
UBP12YJL197W FRE6Q12473 712 aa3.94□□□□□ -1.78
UBP12YJL197W YRF1-4O13559 1382 aa3.94□□□□□ -1.78
UBP12YJL197W RNR1P21524 888 aaKnown RBP3.94□□□□□ -1.78
UBP12YJL197W AIM26P32858 118 aa3.94□□□□□ -1.78
UBP12YJL197W SRO77P38163 1010 aa3.94□□□□□ -1.78
UBP12YJL197W YIL161WP40449 235 aaKnown RBP3.94□□□□□ -1.78
UBP12YJL197W ZIM17P42844 174 aa3.94□□□□□ -1.78
UBP12YJL197W ADA2Q02336 434 aa3.94□□□□□ -1.78
UBP12YJL197W KEL3Q08979 651 aaPredicted RBP3.94□□□□□ -1.78
UBP12YJL197W SMI1P32566 505 aa3.94□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 58.5 ms