RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W MRS6P32864 603 aaKnown RBP2.63□□□□□ -1.99
MSL1YIR009W SDH8P38345 138 aa2.63□□□□□ -1.99
MSL1YIR009W SRP68P38687 599 aaKnown RBP2.63□□□□□ -1.99
MSL1YIR009W GPP2P40106 250 aaKnown RBP2.63□□□□□ -1.99
MSL1YIR009W IRC5P43610 853 aa2.63□□□□□ -1.99
MSL1YIR009W DUG1P43616 481 aaKnown RBP2.63□□□□□ -1.99
MSL1YIR009W NIT2P47016 307 aa2.63□□□□□ -1.99
MSL1YIR009W RNR4P49723 345 aaKnown RBP2.63□□□□□ -1.99
MSL1YIR009W TAN1P53072 289 aaPredicted RBP2.63□□□□□ -1.99
MSL1YIR009W YGR021WP53212 290 aa2.63□□□□□ -1.99
MSL1YIR009W UBX4P54730 416 aa2.63□□□□□ -1.99
MSL1YIR009W NUP53Q03790 475 aa2.63□□□□□ -1.99
MSL1YIR009W MRPL1Q04599 285 aa2.63□□□□□ -1.99
MSL1YIR009W ECM38Q05902 660 aaPredicted RBP2.63□□□□□ -1.99
MSL1YIR009W YPR027CQ12079 277 aa2.63□□□□□ -1.99
MSL1YIR009W PNO1Q99216 274 aaKnown RBP2.63□□□□□ -1.99
MSL1YIR009W CET1O13297 549 aaPredicted RBP2.62□□□□□ -1.99
MSL1YIR009W YEL076C-AP0CX16 216 aa2.62□□□□□ -1.99
MSL1YIR009W YLR464WP0CX17 216 aa2.62□□□□□ -1.99
MSL1YIR009W SEC12P11655 471 aa2.62□□□□□ -1.99
MSL1YIR009W COX11P19516 300 aaKnown RBP2.62□□□□□ -1.99
MSL1YIR009W CBP3P21560 335 aa2.62□□□□□ -1.99
MSL1YIR009W MAK32P23060 363 aa2.62□□□□□ -1.99
MSL1YIR009W YCP4P25349 247 aaKnown RBP2.62□□□□□ -1.99
MSL1YIR009W CWH43P25618 953 aa2.62□□□□□ -1.99
MSL1YIR009W PTP2P29461 750 aa2.62□□□□□ -1.99
MSL1YIR009W YKL133CP36066 463 aa2.62□□□□□ -1.99
MSL1YIR009W IMD2P38697 523 aaKnown RBP2.62□□□□□ -1.99
MSL1YIR009W YEL076CP39971 216 aa2.62□□□□□ -1.99
MSL1YIR009W IMD3P50095 523 aaKnown RBP2.62□□□□□ -1.99
MSL1YIR009W RPL15BP54780 204 aaPredicted RBP2.62□□□□□ -1.99
MSL1YIR009W NEW1Q08972 1196 aaKnown RBP2.62□□□□□ -1.99
MSL1YIR009W VPS5Q92331 675 aa2.62□□□□□ -1.99
MSL1YIR009W Q0010Q9ZZX9 128 aa2.62□□□□□ -1.99
MSL1YIR009W DPB3P27344 201 aa2.61□□□□□ -1.99
MSL1YIR009W COQ3P27680 312 aa2.61□□□□□ -1.99
MSL1YIR009W HEM12P32347 362 aaPredicted RBP2.61□□□□□ -1.99
MSL1YIR009W FTH1P38310 465 aa2.61□□□□□ -1.99
MSL1YIR009W ERP2P39704 215 aa2.61□□□□□ -1.99
MSL1YIR009W VID27P40157 782 aa2.61□□□□□ -1.99
MSL1YIR009W HIS6P40545 261 aa2.61□□□□□ -1.99
MSL1YIR009W SLD3P53135 668 aa2.61□□□□□ -1.99
MSL1YIR009W MTD1Q02046 320 aaKnown RBP2.61□□□□□ -1.99
MSL1YIR009W ENT2Q05785 613 aa2.61□□□□□ -1.99
MSL1YIR009W HIM1Q06674 414 aa2.61□□□□□ -1.99
MSL1YIR009W CHO2P05374 869 aaKnown RBP2.6□□□□□ -1.99
MSL1YIR009W ARG1P22768 420 aa2.6□□□□□ -1.99
MSL1YIR009W AIM17P23180 465 aaKnown RBP2.6□□□□□ -1.99
MSL1YIR009W ATO2P32907 282 aa2.6□□□□□ -1.99
MSL1YIR009W GCS1P35197 352 aa2.6□□□□□ -1.99
MSL1YIR009W FLO5P38894 1075 aa2.6□□□□□ -1.99
MSL1YIR009W CIN1P40987 1014 aa2.6□□□□□ -1.99
MSL1YIR009W MAF1P41910 395 aa2.6□□□□□ -1.99
MSL1YIR009W LYS20P48570 428 aaKnown RBP2.6□□□□□ -1.99
MSL1YIR009W MNT2P53059 558 aa2.6□□□□□ -1.99
MSL1YIR009W YML119WQ03208 357 aa2.6□□□□□ -1.99
MSL1YIR009W SKY1Q03656 742 aa2.6□□□□□ -1.99
MSL1YIR009W SNU56Q03782 492 aaKnown RBP2.6□□□□□ -1.99
MSL1YIR009W MLC2Q06580 163 aa2.6□□□□□ -1.99
MSL1YIR009W SRL1Q08673 210 aa2.6□□□□□ -1.99
MSL1YIR009W GAL4P04386 881 aa2.59□□□□□ -1.99
MSL1YIR009W SEC18P18759 758 aaKnown RBP2.59□□□□□ -1.99
MSL1YIR009W AMD2P22580 549 aa2.59□□□□□ -1.99
MSL1YIR009W RRP43P25359 394 aaPredicted RBP2.59□□□□□ -1.99
MSL1YIR009W DBF20P32328 564 aa2.59□□□□□ -1.99
MSL1YIR009W PTH2P34222 208 aa2.59□□□□□ -1.99
MSL1YIR009W EXO84P38261 753 aa2.59□□□□□ -1.99
MSL1YIR009W YHL041WP38730 149 aa2.59□□□□□ -1.99
MSL1YIR009W VPS8P39702 1274 aa2.59□□□□□ -1.99
MSL1YIR009W IES5P40060 125 aa2.59□□□□□ -1.99
MSL1YIR009W CIR1P42940 261 aa2.59□□□□□ -1.99
MSL1YIR009W COS12P53053 380 aa2.59□□□□□ -1.99
MSL1YIR009W MDR1P53258 950 aa2.59□□□□□ -1.99
MSL1YIR009W COG2P53271 262 aa2.59□□□□□ -1.99
MSL1YIR009W YNL058CP53947 316 aa2.59□□□□□ -1.99
MSL1YIR009W SVL3Q03088 825 aaKnown RBP2.59□□□□□ -1.99
MSL1YIR009W TMA64Q04600 565 aaKnown RBP2.59□□□□□ -1.99
MSL1YIR009W RAD34Q06665 692 aa2.59□□□□□ -1.99
MSL1YIR009W SNA4Q07549 140 aa2.59□□□□□ -1.99
MSL1YIR009W BUD7Q08754 746 aa2.59□□□□□ -1.99
MSL1YIR009W NUR1Q12066 484 aa2.59□□□□□ -1.99
MSL1YIR009W URA3P03962 267 aa2.58□□□□□ -2
MSL1YIR009W PHO81P17442 1178 aa2.58□□□□□ -2
MSL1YIR009W RPT3P33298 428 aaKnown RBP2.58□□□□□ -2
MSL1YIR009W KES1P35844 434 aaKnown RBP2.58□□□□□ -2
MSL1YIR009W RRP8P38961 392 aaKnown RBP2.58□□□□□ -2
MSL1YIR009W CCT4P39078 528 aaKnown RBP2.58□□□□□ -2
MSL1YIR009W MAM1P40065 302 aa2.58□□□□□ -2
MSL1YIR009W EMP65P40085 556 aa2.58□□□□□ -2
MSL1YIR009W RAD26P40352 1085 aa2.58□□□□□ -2
MSL1YIR009W LAS21P40367 830 aa2.58□□□□□ -2
MSL1YIR009W MDV1P47025 714 aa2.58□□□□□ -2
MSL1YIR009W UBP16Q02863 499 aa2.58□□□□□ -2
MSL1YIR009W COG4Q06096 861 aa2.58□□□□□ -2
MSL1YIR009W PEX15Q08215 383 aa2.58□□□□□ -2
MSL1YIR009W LYS21Q12122 440 aaKnown RBP2.58□□□□□ -2
MSL1YIR009W RRP6Q12149 733 aaKnown RBP2.58□□□□□ -2
MSL1YIR009W LCB4Q12246 624 aa2.58□□□□□ -2
MSL1YIR009W YOL114CQ12322 202 aa2.58□□□□□ -2
MSL1YIR009W NKP1Q12493 238 aa2.58□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 92.2 ms