RNA–Protein interactions for RNA: YIL056W

VHR1, Transcript of Transcriptional activator, yeast

Gene VHR1, Length 1,923 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHR1	YIL056W	GDA1	P32621	518 aa		3.5	□□□□□ -1.85
VHR1	YIL056W	YPT53	P36019	220 aa		3.5	□□□□□ -1.85
VHR1	YIL056W	XBP1	P40489	647 aa		3.5	□□□□□ -1.85
VHR1	YIL056W	NOP2	P40991	618 aa	Known RBP	3.5	□□□□□ -1.85
VHR1	YIL056W	YPL108W	Q02872	168 aa	Predicted RBP	3.5	□□□□□ -1.85
VHR1	YIL056W	MDM10	P18409	493 aa		3.5	□□□□□ -1.85
VHR1	YIL056W	SEC18	P18759	758 aa	Known RBP	3.5	□□□□□ -1.85
VHR1	YIL056W	URE2	P23202	354 aa	Known RBP	3.5	□□□□□ -1.85
VHR1	YIL056W	EXO1	P39875	702 aa		3.5	□□□□□ -1.85
VHR1	YIL056W	ARB1	P40024	610 aa	Known RBP	3.5	□□□□□ -1.85
VHR1	YIL056W	YNL058C	P53947	316 aa		3.5	□□□□□ -1.85
VHR1	YIL056W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	3.5	□□□□□ -1.85	RIP-Chip
VHR1	YIL056W	PCL8	Q08966	492 aa		3.5	□□□□□ -1.85
VHR1	YIL056W	APN1	P22936	367 aa		3.49	□□□□□ -1.85
VHR1	YIL056W	QRI7	P43122	407 aa		3.49	□□□□□ -1.85
VHR1	YIL056W	PUS4	P48567	403 aa	Known RBP	3.49	□□□□□ -1.85
VHR1	YIL056W	VPS72	Q03388	795 aa		3.49	□□□□□ -1.85
VHR1	YIL056W	PGK1	P00560	416 aa	Known RBP	3.48	□□□□□ -1.85
VHR1	YIL056W	PIF1	P07271	859 aa		3.48	□□□□□ -1.85
VHR1	YIL056W	ILV2	P07342	687 aa	Known RBP	3.48	□□□□□ -1.85
VHR1	YIL056W	YCR061W	P25639	631 aa		3.48	□□□□□ -1.85
VHR1	YIL056W	RPF2	P36160	344 aa	Known RBP	3.48	□□□□□ -1.85
VHR1	YIL056W	UBX6	P47049	396 aa		3.48	□□□□□ -1.85
VHR1	YIL056W	PAP2	P53632	584 aa	Known RBP	3.48	□□□□□ -1.85
VHR1	YIL056W	ESF2	P53743	316 aa	Known RBP	3.48	□□□□□ -1.85
VHR1	YIL056W	YML119W	Q03208	357 aa		3.48	□□□□□ -1.85
VHR1	YIL056W	PDE1	P22434	369 aa		3.48	□□□□□ -1.85
VHR1	YIL056W	RIT1	P23796	513 aa		3.48	□□□□□ -1.85
VHR1	YIL056W	ARO9	P38840	513 aa	Predicted RBP	3.48	□□□□□ -1.85
VHR1	YIL056W	STT3	P39007	718 aa	Known RBP	3.48	□□□□□ -1.85
VHR1	YIL056W	FUN12	P39730	1002 aa	Known RBP	3.48	□□□□□ -1.85
VHR1	YIL056W	SAP1	P39955	897 aa	Known RBP	3.48	□□□□□ -1.85
VHR1	YIL056W	CIR1	P42940	261 aa		3.48	□□□□□ -1.85
VHR1	YIL056W	PLM2	Q04383	521 aa		3.48	□□□□□ -1.85
VHR1	YIL056W	IWR1	Q07532	353 aa	Predicted RBP	3.48	□□□□□ -1.85
VHR1	YIL056W	RRP6	Q12149	733 aa	Known RBP	3.48	□□□□□ -1.85
VHR1	YIL056W	MRPL36	P36531	177 aa		3.47	□□□□□ -1.85
VHR1	YIL056W	TPO3	Q06451	622 aa		3.47	□□□□□ -1.85
VHR1	YIL056W	ICL2	Q12031	575 aa		3.47	□□□□□ -1.85
VHR1	YIL056W	RDL1	Q12305	139 aa	Known RBP	3.47	□□□□□ -1.85
VHR1	YIL056W	LEU2	P04173	364 aa	Predicted RBP	3.46	□□□□□ -1.85
VHR1	YIL056W	CHO2	P05374	869 aa	Known RBP	3.46	□□□□□ -1.85
VHR1	YIL056W	SIR1	P21691	654 aa		3.46	□□□□□ -1.85
VHR1	YIL056W	MCM3	P24279	971 aa	Known RBP	3.46	□□□□□ -1.85
VHR1	YIL056W	PRP45	P28004	379 aa	Predicted RBP	3.46	□□□□□ -1.85
VHR1	YIL056W	BEM3	P32873	1128 aa		3.46	□□□□□ -1.85
VHR1	YIL056W	MDG1	P53885	366 aa		3.46	□□□□□ -1.85
VHR1	YIL056W	MOT3	P54785	490 aa	Known RBP	3.46	□□□□□ -1.85
VHR1	YIL056W	ERG13	P54839	491 aa	Known RBP	3.46	□□□□□ -1.85
VHR1	YIL056W	RAD33	Q04231	177 aa		3.46	□□□□□ -1.85
VHR1	YIL056W	CYK3	Q07533	885 aa		3.46	□□□□□ -1.85
VHR1	YIL056W	AIM6	Q07716	390 aa		3.46	□□□□□ -1.85
VHR1	YIL056W	YDL242W	Q07746	117 aa		3.46	□□□□□ -1.85
VHR1	YIL056W	ADE3	P07245	946 aa	Known RBP	3.46	□□□□□ -1.86
VHR1	YIL056W	AMD2	P22580	549 aa		3.46	□□□□□ -1.86
VHR1	YIL056W	SWI4	P25302	1093 aa	Known RBP	3.46	□□□□□ -1.86
VHR1	YIL056W	TDA10	P42938	290 aa		3.46	□□□□□ -1.86
VHR1	YIL056W	SNO3	P43544	222 aa		3.46	□□□□□ -1.86
VHR1	YIL056W	BSP1	Q06604	576 aa		3.46	□□□□□ -1.86
VHR1	YIL056W	CLB4	P24871	460 aa		3.45	□□□□□ -1.86
VHR1	YIL056W	RRP43	P25359	394 aa	Predicted RBP	3.45	□□□□□ -1.86
VHR1	YIL056W	YHL041W	P38730	149 aa		3.45	□□□□□ -1.86
VHR1	YIL056W	NET1	P47035	1189 aa		3.45	□□□□□ -1.86
VHR1	YIL056W	YNL092W	P53934	400 aa		3.45	□□□□□ -1.86
VHR1	YIL056W	AFT2	Q08957	416 aa		3.45	□□□□□ -1.86
VHR1	YIL056W	RVB2	Q12464	471 aa	Known RBP	3.45	□□□□□ -1.86
VHR1	YIL056W	PNO1	Q99216	274 aa	Known RBP	3.45	□□□□□ -1.86
VHR1	YIL056W	RTC1	Q08281	1341 aa		3.45	□□□□□ -1.86
VHR1	YIL056W	MSS18	P08593	268 aa		3.44	□□□□□ -1.86
VHR1	YIL056W	ILS1	P09436	1072 aa	Known RBP	3.44	□□□□□ -1.86
VHR1	YIL056W	PET122	P10355	254 aa		3.44	□□□□□ -1.86
VHR1	YIL056W	NUP120	P35729	1037 aa		3.44	□□□□□ -1.86
VHR1	YIL056W	PSF2	P40359	213 aa		3.44	□□□□□ -1.86
VHR1	YIL056W	ZAP1	P47043	880 aa		3.44	□□□□□ -1.86
VHR1	YIL056W	BPL1	P48445	690 aa	Predicted RBP	3.44	□□□□□ -1.86
VHR1	YIL056W	NUC1	P08466	329 aa		3.44	□□□□□ -1.86
VHR1	YIL056W	ARP2	P32381	391 aa	Known RBP	3.44	□□□□□ -1.86
VHR1	YIL056W	PTH2	P34222	208 aa		3.44	□□□□□ -1.86
VHR1	YIL056W	LTP1	P40347	161 aa		3.44	□□□□□ -1.86
VHR1	YIL056W	ULP2	P40537	1034 aa	Predicted RBP	3.44	□□□□□ -1.86
VHR1	YIL056W	UBX4	P54730	416 aa		3.44	□□□□□ -1.86
VHR1	YIL056W	SNU56	Q03782	492 aa	Known RBP	3.44	□□□□□ -1.86
VHR1	YIL056W	HRD3	Q05787	833 aa		3.44	□□□□□ -1.86
VHR1	YIL056W	BUD21	Q08492	214 aa	Predicted RBP	3.44	□□□□□ -1.86
VHR1	YIL056W	LCB4	Q12246	624 aa		3.44	□□□□□ -1.86
VHR1	YIL056W	GSY2	P27472	705 aa		3.43	□□□□□ -1.86
VHR1	YIL056W	YJU2	P28320	278 aa	Predicted RBP	3.43	□□□□□ -1.86
VHR1	YIL056W	MSS51	P32335	436 aa		3.43	□□□□□ -1.86
VHR1	YIL056W	PSA1	P41940	361 aa	Known RBP	3.43	□□□□□ -1.86
VHR1	YIL056W	SAE2	P46946	345 aa		3.43	□□□□□ -1.86
VHR1	YIL056W	CPR6	P53691	371 aa	Known RBP	3.43	□□□□□ -1.86
VHR1	YIL056W	VMS1	Q04311	632 aa	Known RBP	3.43	□□□□□ -1.86
VHR1	YIL056W	YDR109C	Q04585	715 aa		3.43	□□□□□ -1.86
VHR1	YIL056W	BRE1	Q07457	700 aa	Known RBP	3.43	□□□□□ -1.86
VHR1	YIL056W	PGI1	P12709	554 aa	Known RBP	3.42	□□□□□ -1.86
VHR1	YIL056W	RAD16	P31244	790 aa		3.42	□□□□□ -1.86
VHR1	YIL056W	VBA2	P38358	474 aa	Known RBP	3.42	□□□□□ -1.86
VHR1	YIL056W	SPC72	P39723	622 aa		3.42	□□□□□ -1.86
VHR1	YIL056W	RAD26	P40352	1085 aa		3.42	□□□□□ -1.86
VHR1	YIL056W	TPM2	P40414	161 aa		3.42	□□□□□ -1.86

Retrieved 100 of 5,963 RNA–protein pairs in 98.5 ms