RNA–Protein interactions for RNA: YHR098C

SFB3, Transcript of Component of the Sec23p-Sfb3p heterodimer of the COPII vesicle coat, yeast

Gene SFB3, Length 2,790 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SFB3	YHR098C	HXT8	P40886	569 aa		5.79	□□□□□ -1.48
SFB3	YHR098C	PAC11	P40960	533 aa		5.79	□□□□□ -1.48
SFB3	YHR098C	YJL181W	P46987	611 aa		5.79	□□□□□ -1.48
SFB3	YHR098C	YGR125W	P53273	1036 aa		5.79	□□□□□ -1.48
SFB3	YHR098C	RBG2	P53295	368 aa	Known RBP	5.79	□□□□□ -1.48
SFB3	YHR098C	YNR063W	P53749	607 aa		5.79	□□□□□ -1.48
SFB3	YHR098C	NOG1	Q02892	647 aa	Known RBP	5.79	□□□□□ -1.48
SFB3	YHR098C	NAN1	Q02931	896 aa	Known RBP	5.79	□□□□□ -1.48
SFB3	YHR098C	URC2	Q04411	772 aa		5.79	□□□□□ -1.48
SFB3	YHR098C	PUN1	Q06991	263 aa		5.79	□□□□□ -1.48
SFB3	YHR098C	OPI10	Q08202	246 aa		5.79	□□□□□ -1.48
SFB3	YHR098C	YOR342C	Q12182	319 aa		5.79	□□□□□ -1.48
SFB3	YHR098C	HMG2	P12684	1045 aa		5.79	□□□□□ -1.48
SFB3	YHR098C	MRP13	P12686	339 aa		5.79	□□□□□ -1.48
SFB3	YHR098C	PRI2	P20457	528 aa		5.79	□□□□□ -1.48
SFB3	YHR098C	BET3	P36149	193 aa		5.79	□□□□□ -1.48
SFB3	YHR098C	YBR285W	P38354	144 aa		5.79	□□□□□ -1.48
SFB3	YHR098C	SER33	P40510	469 aa		5.79	□□□□□ -1.48
SFB3	YHR098C	ULP2	P40537	1034 aa	Predicted RBP	5.79	□□□□□ -1.48
SFB3	YHR098C	MSE1	P48525	536 aa		5.79	□□□□□ -1.48
SFB3	YHR098C	DIE2	P50076	525 aa		5.79	□□□□□ -1.48
SFB3	YHR098C	BIO4	P53630	237 aa		5.79	□□□□□ -1.48
SFB3	YHR098C	RMT2	Q03305	412 aa		5.79	□□□□□ -1.48
SFB3	YHR098C	SMD2	Q06217	110 aa	Known RBP	5.79	□□□□□ -1.48
SFB3	YHR098C	PUS7	Q08647	676 aa	Known RBP	5.79	□□□□□ -1.48
SFB3	YHR098C	SRF1	Q12516	437 aa		5.79	□□□□□ -1.48
SFB3	YHR098C	MGT1	P26188	188 aa		5.78	□□□□□ -1.48
SFB3	YHR098C	FRT2	P39734	528 aa		5.78	□□□□□ -1.48
SFB3	YHR098C	MSB3	P48566	633 aa	Predicted RBP	5.78	□□□□□ -1.48
SFB3	YHR098C	MRK1	P50873	501 aa		5.78	□□□□□ -1.48
SFB3	YHR098C	COG2	P53271	262 aa		5.78	□□□□□ -1.48
SFB3	YHR098C	BAG7	Q12128	409 aa		5.78	□□□□□ -1.48
SFB3	YHR098C	RIM15	P43565	1770 aa		5.78	□□□□□ -1.48
SFB3	YHR098C	ILS1	P09436	1072 aa	Known RBP	5.78	□□□□□ -1.48
SFB3	YHR098C	TRK2	P28584	889 aa		5.78	□□□□□ -1.48
SFB3	YHR098C	ZIP1	P31111	875 aa		5.78	□□□□□ -1.48
SFB3	YHR098C	TFC1	P32367	649 aa		5.78	□□□□□ -1.48
SFB3	YHR098C	SMI1	P32566	505 aa		5.78	□□□□□ -1.48
SFB3	YHR098C	NCL1	P38205	684 aa	Known RBP	5.78	□□□□□ -1.48
SFB3	YHR098C	HXT15	P54854	567 aa		5.78	□□□□□ -1.48
SFB3	YHR098C	BRE4	Q07660	1125 aa		5.78	□□□□□ -1.48
SFB3	YHR098C	SGT1	Q08446	395 aa		5.78	□□□□□ -1.48
SFB3	YHR098C	YDL109C	Q12103	647 aa		5.78	□□□□□ -1.48
SFB3	YHR098C	LSO2	Q3E772	92 aa	Known RBP	5.78	□□□□□ -1.48
SFB3	YHR098C	YBR298C-A	Q8TGK4	73 aa		5.78	□□□□□ -1.48
SFB3	YHR098C	IDI1	P15496	288 aa		5.78	□□□□□ -1.48
SFB3	YHR098C	STF2	P16965	84 aa		5.78	□□□□□ -1.48
SFB3	YHR098C	CRM1	P30822	1084 aa	Known RBP	5.78	□□□□□ -1.48
SFB3	YHR098C	IRE1	P32361	1115 aa		5.78	□□□□□ -1.48
SFB3	YHR098C	UTP30	P36144	274 aa	Known RBP	5.78	□□□□□ -1.48
SFB3	YHR098C	YPK3	P38070	525 aa		5.78	□□□□□ -1.48
SFB3	YHR098C	GOS1	P38736	223 aa		5.78	□□□□□ -1.48
SFB3	YHR098C	YMR134W	P40207	237 aa		5.78	□□□□□ -1.48
SFB3	YHR098C	SDS3	P40505	327 aa		5.78	□□□□□ -1.48
SFB3	YHR098C	MNN11	P46985	422 aa	Known RBP	5.78	□□□□□ -1.48
SFB3	YHR098C	IMD3	P50095	523 aa	Known RBP	5.78	□□□□□ -1.48
SFB3	YHR098C	CNM67	P53865	581 aa	Known RBP	5.78	□□□□□ -1.48
SFB3	YHR098C	ISU1	Q03020	165 aa		5.78	□□□□□ -1.48
SFB3	YHR098C	THI20	Q08224	551 aa		5.78	□□□□□ -1.48
SFB3	YHR098C	SPE3	Q12074	293 aa	Known RBP	5.78	□□□□□ -1.48
SFB3	YHR098C	SPE4	Q12455	300 aa		5.78	□□□□□ -1.48
SFB3	YHR098C	BNI1	P41832	1953 aa		5.77	□□□□□ -1.49
SFB3	YHR098C	SNF4	P12904	322 aa		5.77	□□□□□ -1.49
SFB3	YHR098C	VPS3	P23643	1011 aa		5.77	□□□□□ -1.49
SFB3	YHR098C	RIT1	P23796	513 aa		5.77	□□□□□ -1.49
SFB3	YHR098C	MGM1	P32266	881 aa		5.77	□□□□□ -1.49
SFB3	YHR098C	PRP19	P32523	503 aa	Known RBP	5.77	□□□□□ -1.49
SFB3	YHR098C	UGA4	P32837	571 aa		5.77	□□□□□ -1.49
SFB3	YHR098C	YBR197C	P38306	217 aa		5.77	□□□□□ -1.49
SFB3	YHR098C	SMF2	P38778	549 aa		5.77	□□□□□ -1.49
SFB3	YHR098C	LSM12	P38828	187 aa	Known RBP	5.77	□□□□□ -1.49
SFB3	YHR098C	UTP9	P38882	575 aa	Known RBP	5.77	□□□□□ -1.49
SFB3	YHR098C	CCT6	P39079	546 aa		5.77	□□□□□ -1.49
SFB3	YHR098C	FTR1	P40088	404 aa		5.77	□□□□□ -1.49
SFB3	YHR098C	NUP84	P52891	726 aa		5.77	□□□□□ -1.49
SFB3	YHR098C	SSP2	Q08646	371 aa		5.77	□□□□□ -1.49
SFB3	YHR098C	FAL1	Q12099	399 aa	Known RBP	5.77	□□□□□ -1.49
SFB3	YHR098C	TSC13	Q99190	310 aa		5.77	□□□□□ -1.49
SFB3	YHR098C	CCP1	P00431	361 aa		5.77	□□□□□ -1.49
SFB3	YHR098C	PUT2	P07275	575 aa		5.77	□□□□□ -1.49
SFB3	YHR098C	YEL076C-A	P0CX16	216 aa		5.77	□□□□□ -1.49
SFB3	YHR098C	YLR464W	P0CX17	216 aa		5.77	□□□□□ -1.49
SFB3	YHR098C	HMG1	P12683	1054 aa		5.77	□□□□□ -1.49
SFB3	YHR098C	YAP1	P19880	650 aa	Known RBP	5.77	□□□□□ -1.49
SFB3	YHR098C	VPS33	P20795	691 aa		5.77	□□□□□ -1.49
SFB3	YHR098C	SLY41	P22215	453 aa		5.77	□□□□□ -1.49
SFB3	YHR098C	MUD1	P32605	298 aa	Known RBP	5.77	□□□□□ -1.49
SFB3	YHR098C	VMA8	P32610	256 aa	Known RBP	5.77	□□□□□ -1.49
SFB3	YHR098C	YHL012W	P38709	493 aa		5.77	□□□□□ -1.49
SFB3	YHR098C	DYS1	P38791	387 aa		5.77	□□□□□ -1.49
SFB3	YHR098C	YEL076C	P39971	216 aa		5.77	□□□□□ -1.49
SFB3	YHR098C	PSY2	P40164	858 aa		5.77	□□□□□ -1.49
SFB3	YHR098C	CHS6	P40955	746 aa		5.77	□□□□□ -1.49
SFB3	YHR098C	DIP5	P53388	608 aa		5.77	□□□□□ -1.49
SFB3	YHR098C	ZRG17	P53735	605 aa		5.77	□□□□□ -1.49
SFB3	YHR098C	PRO2	P54885	456 aa	Known RBP	5.77	□□□□□ -1.49
SFB3	YHR098C	CLU1	Q03690	1277 aa	Known RBP	5.77	□□□□□ -1.49
SFB3	YHR098C	SPC2	Q04969	178 aa		5.77	□□□□□ -1.49
SFB3	YHR098C	MPD2	Q99316	277 aa		5.77	□□□□□ -1.49
SFB3	YHR098C	GPM1	P00950	247 aa	Known RBP	5.76	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 55.4 ms