RNA–Protein interactions for RNA: YHR026W

VMA16, Transcript of Subunit c'' of the vacuolar ATPase, yeastyeast

Gene VMA16, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA16YHR026W YEL076CP39971 216 aa5.85□□□□□ -1.47
VMA16YHR026W GTS1P40956 396 aa5.85□□□□□ -1.47
VMA16YHR026W IES1P43579 692 aa5.85□□□□□ -1.47
VMA16YHR026W VPS25P47142 202 aa5.85□□□□□ -1.47
VMA16YHR026W UTP8P53276 713 aaKnown RBP5.85□□□□□ -1.47
VMA16YHR026W SPO20Q04359 397 aa5.85□□□□□ -1.47
VMA16YHR026W ADY4Q05955 493 aa5.85□□□□□ -1.47
VMA16YHR026W VAC14Q06708 880 aa5.85□□□□□ -1.47
VMA16YHR026W OPY2Q06810 360 aa5.85□□□□□ -1.47
VMA16YHR026W RCL1Q08096 367 aaPredicted RBP5.85□□□□□ -1.47
VMA16YHR026W OPI10Q08202 246 aa5.85□□□□□ -1.47
VMA16YHR026W YPL066WQ12194 479 aa5.85□□□□□ -1.47
VMA16YHR026W YOL098CQ12496 1037 aa5.85□□□□□ -1.47
VMA16YHR026W CTF3Q12748 733 aa5.85□□□□□ -1.47
VMA16YHR026W RPL4AP10664 362 aaKnown RBP5.84□□□□□ -1.47
VMA16YHR026W SSB1P11484 613 aaKnown RBP5.84□□□□□ -1.47
VMA16YHR026W MTF1P14908 341 aaKnown RBP5.84□□□□□ -1.47
VMA16YHR026W CKI1P20485 582 aa5.84□□□□□ -1.47
VMA16YHR026W PPH22P23595 377 aa5.84□□□□□ -1.47
VMA16YHR026W LIP5P32875 414 aa5.84□□□□□ -1.47
VMA16YHR026W TRM2P33753 639 aa5.84□□□□□ -1.47
VMA16YHR026W BYE1P36106 594 aa5.84□□□□□ -1.47
VMA16YHR026W PEX7P39108 375 aa5.84□□□□□ -1.47
VMA16YHR026W SSB2P40150 613 aaKnown RBP5.84□□□□□ -1.47
VMA16YHR026W BTT1P40314 149 aaPredicted RBP5.84□□□□□ -1.47
VMA16YHR026W SEC9P40357 651 aa5.84□□□□□ -1.47
VMA16YHR026W EFM4P40516 257 aa5.84□□□□□ -1.47
VMA16YHR026W YGL176CP46945 554 aa5.84□□□□□ -1.47
VMA16YHR026W RPL4BP49626 362 aaKnown RBP5.84□□□□□ -1.47
VMA16YHR026W PRP31P49704 494 aaPredicted RBP5.84□□□□□ -1.47
VMA16YHR026W SHE10P53075 577 aa5.84□□□□□ -1.47
VMA16YHR026W NMA2P53204 395 aa5.84□□□□□ -1.47
VMA16YHR026W BOP3P53958 396 aa5.84□□□□□ -1.47
VMA16YHR026W UME1Q03010 460 aa5.84□□□□□ -1.47
VMA16YHR026W SSY1Q03770 852 aa5.84□□□□□ -1.47
VMA16YHR026W SHS1Q07657 551 aa5.84□□□□□ -1.47
VMA16YHR026W SPO75Q07798 868 aa5.84□□□□□ -1.47
VMA16YHR026W TCO89Q08921 799 aa5.84□□□□□ -1.47
VMA16YHR026W YPQ1Q12010 308 aa5.84□□□□□ -1.47
VMA16YHR026W HRT3Q12347 344 aa5.84□□□□□ -1.47
VMA16YHR026W SAM35P14693 329 aa5.83□□□□□ -1.48
VMA16YHR026W SPO12P17123 173 aa5.83□□□□□ -1.48
VMA16YHR026W HXT1P32465 570 aa5.83□□□□□ -1.48
VMA16YHR026W CNS1P33313 385 aa5.83□□□□□ -1.48
VMA16YHR026W SLA2P33338 968 aa5.83□□□□□ -1.48
VMA16YHR026W SIP3P38717 1229 aa5.83□□□□□ -1.48
VMA16YHR026W CCT4P39078 528 aaKnown RBP5.83□□□□□ -1.48
VMA16YHR026W HNT2P49775 206 aa5.83□□□□□ -1.48
VMA16YHR026W ARK1P53974 638 aa5.83□□□□□ -1.48
VMA16YHR026W YAT1P80235 687 aa5.83□□□□□ -1.48
VMA16YHR026W VTC3Q02725 835 aa5.83□□□□□ -1.48
VMA16YHR026W HER2Q03557 464 aa5.83□□□□□ -1.48
VMA16YHR026W YOL075CQ08234 1294 aa5.83□□□□□ -1.48
VMA16YHR026W FLC1Q08967 793 aa5.83□□□□□ -1.48
VMA16YHR026W CWC2Q12046 339 aaPredicted RBP5.83□□□□□ -1.48
VMA16YHR026W DAS2Q12084 232 aa5.83□□□□□ -1.48
VMA16YHR026W MED1Q12321 566 aa5.83□□□□□ -1.48
VMA16YHR026W PPR1P07272 904 aaPredicted RBP5.82□□□□□ -1.48
VMA16YHR026W HSF1P10961 833 aa5.82□□□□□ -1.48
VMA16YHR026W PFK1P16861 987 aaKnown RBP5.82□□□□□ -1.48
VMA16YHR026W RPO26P20435 155 aa5.82□□□□□ -1.48
VMA16YHR026W SSD1P24276 1250 aaKnown RBP RIP-Chip data5.82□□□□□ -1.48not detected
VMA16YHR026W GAC1P28006 793 aa5.82□□□□□ -1.48
VMA16YHR026W RAD16P31244 790 aa5.82□□□□□ -1.48
VMA16YHR026W NFU1P32860 256 aa5.82□□□□□ -1.48
VMA16YHR026W TSA1P34760 196 aaKnown RBP5.82□□□□□ -1.48
VMA16YHR026W RPC25P35718 212 aa5.82□□□□□ -1.48
VMA16YHR026W PPS1P38148 807 aa5.82□□□□□ -1.48
VMA16YHR026W SIF2P38262 535 aa5.82□□□□□ -1.48
VMA16YHR026W PIH1P38768 344 aa5.82□□□□□ -1.48
VMA16YHR026W DOT6P40059 670 aaKnown RBP5.82□□□□□ -1.48
VMA16YHR026W RMD8P43620 662 aa5.82□□□□□ -1.48
VMA16YHR026W TOS3P43637 560 aa5.82□□□□□ -1.48
VMA16YHR026W SCD6P45978 349 aaKnown RBP RIP-Chip data5.82□□□□□ -1.48not detected
VMA16YHR026W COS5P47187 383 aa5.82□□□□□ -1.48
VMA16YHR026W ORC5P50874 479 aa5.82□□□□□ -1.48
VMA16YHR026W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.82□□□□□ -1.48not detected
VMA16YHR026W NGL3Q03210 505 aa5.82□□□□□ -1.48
VMA16YHR026W SNU56Q03782 492 aaKnown RBP5.82□□□□□ -1.48
VMA16YHR026W BSP1Q06604 576 aa5.82□□□□□ -1.48
VMA16YHR026W RAD57P25301 460 aa5.81□□□□□ -1.48
VMA16YHR026W SWE1P32944 819 aa5.81□□□□□ -1.48
VMA16YHR026W YKL107WP34251 309 aa5.81□□□□□ -1.48
VMA16YHR026W GGA2P38817 585 aaKnown RBP5.81□□□□□ -1.48
VMA16YHR026W SDS3P40505 327 aa5.81□□□□□ -1.48
VMA16YHR026W TNA1P53322 534 aa5.81□□□□□ -1.48
VMA16YHR026W CUR1Q06469 252 aa5.81□□□□□ -1.48
VMA16YHR026W CDD1Q06549 142 aa5.81□□□□□ -1.48
VMA16YHR026W ATG23Q06671 453 aa5.81□□□□□ -1.48
VMA16YHR026W YPR078CQ06813 372 aa5.81□□□□□ -1.48
VMA16YHR026W YDL057WQ07379 328 aa5.81□□□□□ -1.48
VMA16YHR026W TSR1Q07381 788 aaKnown RBP5.81□□□□□ -1.48
VMA16YHR026W BRE4Q07660 1125 aa5.81□□□□□ -1.48
VMA16YHR026W TAF10Q12030 206 aa5.81□□□□□ -1.48
VMA16YHR026W GLT1Q12680 2145 aaKnown RBP5.81□□□□□ -1.48
VMA16YHR026W PUB1P32588 453 aaKnown RBP RIP-Chip data5.8□□□□□ -1.48not detected
VMA16YHR026W TFB1P32776 642 aa5.8□□□□□ -1.48
VMA16YHR026W AIM26P32858 118 aa5.8□□□□□ -1.48
VMA16YHR026W YKR051WP36142 418 aa5.8□□□□□ -1.48
VMA16YHR026W OCA5P38738 679 aa5.8□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms