RNA–Protein interactions for RNA: YGR143W

SKN1, Transcript of Protein involved in sphingolipid biosynthesis, yeastyeast

Gene SKN1, Length 2,316 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKN1YGR143W ACS1Q01574 713 aa5.99□□□□□ -1.45
SKN1YGR143W KAP120Q02932 1032 aa5.99□□□□□ -1.45
SKN1YGR143W WAR1Q03631 944 aa5.99□□□□□ -1.45
SKN1YGR143W GAD1Q04792 585 aa5.99□□□□□ -1.45
SKN1YGR143W WHI4Q07655 649 aaKnown RBP5.99□□□□□ -1.45
SKN1YGR143W GPI13Q07830 1017 aa5.99□□□□□ -1.45
SKN1YGR143W MEU1Q07938 337 aaKnown RBP RIP-Chip data5.99□□□□□ -1.45not detected
SKN1YGR143W TMA46Q12000 345 aaKnown RBP5.99□□□□□ -1.45
SKN1YGR143W HUA2Q12134 243 aa5.99□□□□□ -1.45
SKN1YGR143W SET6Q12529 373 aa5.99□□□□□ -1.45
SKN1YGR143W DBP5P20449 482 aaKnown RBP5.98□□□□□ -1.45
SKN1YGR143W PTP1P25044 335 aa5.98□□□□□ -1.45
SKN1YGR143W COQ8P27697 501 aa5.98□□□□□ -1.45
SKN1YGR143W ORC2P32833 620 aa5.98□□□□□ -1.45
SKN1YGR143W PPG1P32838 368 aa5.98□□□□□ -1.45
SKN1YGR143W AAP1P37898 856 aaKnown RBP5.98□□□□□ -1.45
SKN1YGR143W RDH54P38086 958 aa5.98□□□□□ -1.45
SKN1YGR143W HEK2P38199 381 aaKnown RBP RIP-Chip data5.98□□□□□ -1.45 RIP-Chip
SKN1YGR143W MSG5P38590 489 aa5.98□□□□□ -1.45
SKN1YGR143W CCC2P38995 1004 aa5.98□□□□□ -1.45
SKN1YGR143W FRT2P39734 528 aa5.98□□□□□ -1.45
SKN1YGR143W THO1P40040 218 aaKnown RBP5.98□□□□□ -1.45
SKN1YGR143W SER3P40054 469 aa5.98□□□□□ -1.45
SKN1YGR143W HXT17P53631 564 aa5.98□□□□□ -1.45
SKN1YGR143W DUS1P53759 423 aaKnown RBP5.98□□□□□ -1.45
SKN1YGR143W CAF120P53836 1060 aa5.98□□□□□ -1.45
SKN1YGR143W ELP3Q02908 557 aaKnown RBP5.98□□□□□ -1.45
SKN1YGR143W BNA7Q04066 261 aa5.98□□□□□ -1.45
SKN1YGR143W SPO77Q06134 477 aa5.98□□□□□ -1.45
SKN1YGR143W INH1P01097 85 aa5.98□□□□□ -1.45
SKN1YGR143W FUR4P05316 633 aaKnown RBP5.98□□□□□ -1.45
SKN1YGR143W GCD1P09032 578 aaPredicted RBP5.98□□□□□ -1.45
SKN1YGR143W HEM3P28789 327 aa5.98□□□□□ -1.45
SKN1YGR143W SIN4P32259 974 aa5.98□□□□□ -1.45
SKN1YGR143W HPM1P40481 377 aa5.98□□□□□ -1.45
SKN1YGR143W EPS1P40557 701 aa5.98□□□□□ -1.45
SKN1YGR143W LSM1P47017 172 aaKnown RBP5.98□□□□□ -1.45
SKN1YGR143W TOF1P53840 1238 aa5.98□□□□□ -1.45
SKN1YGR143W BUD22Q04347 519 aaKnown RBP5.98□□□□□ -1.45
SKN1YGR143W NKP2Q06162 153 aa5.98□□□□□ -1.45
SKN1YGR143W VAC14Q06708 880 aa5.98□□□□□ -1.45
SKN1YGR143W YLR001CQ07895 862 aa5.98□□□□□ -1.45
SKN1YGR143W NEW1Q08972 1196 aaKnown RBP5.98□□□□□ -1.45
SKN1YGR143W BAG7Q12128 409 aa5.98□□□□□ -1.45
SKN1YGR143W BI4P03879 638 aa5.97□□□□□ -1.45
SKN1YGR143W PIF1P07271 859 aa5.97□□□□□ -1.45
SKN1YGR143W GLN4P13188 809 aaKnown RBP5.97□□□□□ -1.45
SKN1YGR143W MSB1P21339 1137 aaKnown RBP5.97□□□□□ -1.45
SKN1YGR143W PRP28P23394 588 aa5.97□□□□□ -1.45
SKN1YGR143W YCR101CP25607 182 aa5.97□□□□□ -1.45
SKN1YGR143W PEP3P27801 918 aa5.97□□□□□ -1.45
SKN1YGR143W CYM1P32898 989 aa5.97□□□□□ -1.45
SKN1YGR143W BCD1P38772 366 aa5.97□□□□□ -1.45
SKN1YGR143W SBE22P38814 852 aa5.97□□□□□ -1.45
SKN1YGR143W NIT1P40447 199 aa5.97□□□□□ -1.45
SKN1YGR143W PKP1P40530 394 aa5.97□□□□□ -1.45
SKN1YGR143W ELP2P42935 788 aa5.97□□□□□ -1.45
SKN1YGR143W RAI1P53063 387 aaKnown RBP5.97□□□□□ -1.45
SKN1YGR143W PIB2P53191 635 aa5.97□□□□□ -1.45
SKN1YGR143W YGR021WP53212 290 aa5.97□□□□□ -1.45
SKN1YGR143W PGA2P53903 129 aa5.97□□□□□ -1.45
SKN1YGR143W VAC7P53950 1165 aa5.97□□□□□ -1.45
SKN1YGR143W RSC4Q02206 625 aa5.97□□□□□ -1.45
SKN1YGR143W DUS3Q06053 668 aaKnown RBP5.97□□□□□ -1.45
SKN1YGR143W SIL1Q08199 421 aa5.97□□□□□ -1.45
SKN1YGR143W TYW1Q08960 810 aaKnown RBP5.97□□□□□ -1.45
SKN1YGR143W CSR2Q12734 1121 aa5.97□□□□□ -1.45
SKN1YGR143W TRX1P22217 103 aaKnown RBP5.97□□□□□ -1.45
SKN1YGR143W TPO5P36029 618 aa5.97□□□□□ -1.45
SKN1YGR143W NOP4P37838 685 aaKnown RBP5.97□□□□□ -1.45
SKN1YGR143W GRS1P38088 690 aaKnown RBP5.97□□□□□ -1.45
SKN1YGR143W BOL3P39724 118 aa5.97□□□□□ -1.45
SKN1YGR143W PTC2P39966 464 aaKnown RBP5.97□□□□□ -1.45
SKN1YGR143W BBC1P47068 1157 aa5.97□□□□□ -1.45
SKN1YGR143W PET117Q02771 107 aa5.97□□□□□ -1.45
SKN1YGR143W RTT103Q05543 409 aa5.97□□□□□ -1.45
SKN1YGR143W TAF10Q12030 206 aa5.97□□□□□ -1.45
SKN1YGR143W VPS54Q12071 889 aa5.97□□□□□ -1.45
SKN1YGR143W MET8P15807 274 aa5.96□□□□□ -1.46
SKN1YGR143W SIS1P25294 352 aaKnown RBP5.96□□□□□ -1.46
SKN1YGR143W SEC1P30619 724 aaKnown RBP5.96□□□□□ -1.46
SKN1YGR143W MVD1P32377 396 aaKnown RBP5.96□□□□□ -1.46
SKN1YGR143W CAF4P36130 643 aa5.96□□□□□ -1.46
SKN1YGR143W SEA4P38164 1038 aa5.96□□□□□ -1.46
SKN1YGR143W ECM21P38167 1117 aaKnown RBP5.96□□□□□ -1.46
SKN1YGR143W YMR147WP40218 223 aaKnown RBP5.96□□□□□ -1.46
SKN1YGR143W MLC1P53141 149 aa5.96□□□□□ -1.46
SKN1YGR143W ALG12P53730 551 aa5.96□□□□□ -1.46
SKN1YGR143W ORC3P54790 616 aa5.96□□□□□ -1.46
SKN1YGR143W SPP1Q03012 353 aa5.96□□□□□ -1.46
SKN1YGR143W YDR131CQ03899 556 aa5.96□□□□□ -1.46
SKN1YGR143W FMP40Q08968 688 aaPredicted RBP5.96□□□□□ -1.46
SKN1YGR143W AHC1Q12433 566 aa5.96□□□□□ -1.46
SKN1YGR143W YCL001W-BQ96VH2 84 aa5.96□□□□□ -1.46
SKN1YGR143W HXK1P04806 485 aaKnown RBP5.96□□□□□ -1.46
SKN1YGR143W FBP1P09201 348 aa5.96□□□□□ -1.46
SKN1YGR143W HVG1P0CE11 249 aa5.96□□□□□ -1.46
SKN1YGR143W CDC24P11433 854 aaPredicted RBP5.96□□□□□ -1.46
SKN1YGR143W SEC63P14906 663 aa5.96□□□□□ -1.46
SKN1YGR143W MGM101P32787 269 aaKnown RBP5.96□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms