RNA–Protein interactions for RNA: YER098W

UBP9, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP9, Length 2,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP9YER098W LHS1P36016 881 aa5.44□□□□□ -1.54
UBP9YER098W UBS1P38290 277 aa5.44□□□□□ -1.54
UBP9YER098W YIL001WP40560 513 aa5.44□□□□□ -1.54
UBP9YER098W JJJ3P47138 172 aa5.44□□□□□ -1.54
UBP9YER098W MTR3P48240 250 aaPredicted RBP5.44□□□□□ -1.54
UBP9YER098W MNT2P53059 558 aa5.44□□□□□ -1.54
UBP9YER098W IST1P53843 298 aaPredicted RBP5.44□□□□□ -1.54
UBP9YER098W ALF1P53904 254 aa5.44□□□□□ -1.54
UBP9YER098W VAC14Q06708 880 aa5.44□□□□□ -1.54
UBP9YER098W STP4Q07351 490 aa5.44□□□□□ -1.54
UBP9YER098W DBP10Q12389 995 aaKnown RBP5.44□□□□□ -1.54
UBP9YER098W FBP1P09201 348 aa5.44□□□□□ -1.54
UBP9YER098W HOM3P10869 527 aa5.44□□□□□ -1.54
UBP9YER098W RPT3P33298 428 aaKnown RBP5.44□□□□□ -1.54
UBP9YER098W APN2P38207 520 aa5.44□□□□□ -1.54
UBP9YER098W FZO1P38297 855 aa5.44□□□□□ -1.54
UBP9YER098W SGM1P47166 707 aa5.44□□□□□ -1.54
UBP9YER098W ORC4P54791 529 aa5.44□□□□□ -1.54
UBP9YER098W MSC2Q03455 724 aa5.44□□□□□ -1.54
UBP9YER098W ARA2Q04212 335 aa5.44□□□□□ -1.54
UBP9YER098W TFC6Q06339 672 aa5.44□□□□□ -1.54
UBP9YER098W GRC3Q07845 632 aa5.44□□□□□ -1.54
UBP9YER098W DPH6Q12429 685 aa5.44□□□□□ -1.54
UBP9YER098W MET8P15807 274 aa5.43□□□□□ -1.54
UBP9YER098W TUP1P16649 713 aa5.43□□□□□ -1.54
UBP9YER098W PRP4P20053 465 aaKnown RBP5.43□□□□□ -1.54
UBP9YER098W BRF1P29056 596 aa5.43□□□□□ -1.54
UBP9YER098W SFA1P32771 386 aa5.43□□□□□ -1.54
UBP9YER098W NPL6P32832 435 aa5.43□□□□□ -1.54
UBP9YER098W TDA11P38854 504 aa5.43□□□□□ -1.54
UBP9YER098W NUP60P39705 539 aa5.43□□□□□ -1.54
UBP9YER098W ENP2P48234 707 aaKnown RBP5.43□□□□□ -1.54
UBP9YER098W EXG2P52911 562 aa5.43□□□□□ -1.54
UBP9YER098W RBG2P53295 368 aaKnown RBP5.43□□□□□ -1.54
UBP9YER098W CBK1P53894 756 aa5.43□□□□□ -1.54
UBP9YER098W VTC3Q02725 835 aa5.43□□□□□ -1.54
UBP9YER098W GGA1Q06336 557 aa5.43□□□□□ -1.54
UBP9YER098W ISA1Q07821 250 aaPredicted RBP5.43□□□□□ -1.54
UBP9YER098W AFT2Q08957 416 aa5.43□□□□□ -1.54
UBP9YER098W DIN7Q12086 430 aa5.43□□□□□ -1.54
UBP9YER098W GPR1Q12361 961 aa5.43□□□□□ -1.54
UBP9YER098W SAC3P46674 1301 aa5.43□□□□□ -1.54
UBP9YER098W SPS1P08458 490 aa5.43□□□□□ -1.54
UBP9YER098W RPC19P28000 142 aaKnown RBP5.43□□□□□ -1.54
UBP9YER098W LRG1P35688 1017 aa5.43□□□□□ -1.54
UBP9YER098W YKT6P36015 200 aaKnown RBP5.43□□□□□ -1.54
UBP9YER098W SET3P36124 751 aa5.43□□□□□ -1.54
UBP9YER098W YBR138CP38277 524 aa5.43□□□□□ -1.54
UBP9YER098W SAK1P38990 1142 aa5.43□□□□□ -1.54
UBP9YER098W BUD16P39988 312 aa5.43□□□□□ -1.54
UBP9YER098W YER010CP40011 234 aa5.43□□□□□ -1.54
UBP9YER098W CCT8P47079 568 aaKnown RBP5.43□□□□□ -1.54
UBP9YER098W SAP4P53036 818 aa5.43□□□□□ -1.54
UBP9YER098W YAP1802P53309 568 aa5.43□□□□□ -1.54
UBP9YER098W YNR071CP53757 342 aa5.43□□□□□ -1.54
UBP9YER098W YNL144CP53907 740 aa5.43□□□□□ -1.54
UBP9YER098W TIM10P87108 93 aa5.43□□□□□ -1.54
UBP9YER098W RCR2Q03446 210 aaKnown RBP5.43□□□□□ -1.54
UBP9YER098W TDA9Q04545 1251 aa5.43□□□□□ -1.54
UBP9YER098W GSF2Q04697 403 aaKnown RBP5.43□□□□□ -1.54
UBP9YER098W YRF1-1P0CX20 1796 aa5.42□□□□□ -1.54
UBP9YER098W YRF1-5P0CX21 1796 aa5.42□□□□□ -1.54
UBP9YER098W YRF1-8P0CX22 1796 aa5.42□□□□□ -1.54
UBP9YER098W ARG4P04076 463 aaPredicted RBP5.42□□□□□ -1.54
UBP9YER098W LPD1P09624 499 aaKnown RBP5.42□□□□□ -1.54
UBP9YER098W KIN2P13186 1147 aaKnown RBP5.42□□□□□ -1.54
UBP9YER098W RSC6P25632 483 aa5.42□□□□□ -1.54
UBP9YER098W SIP3P38717 1229 aa5.42□□□□□ -1.54
UBP9YER098W SSP120P39931 234 aaKnown RBP5.42□□□□□ -1.54
UBP9YER098W ZRG8P40021 1076 aa5.42□□□□□ -1.54
UBP9YER098W RIC1P40395 1056 aa5.42□□□□□ -1.54
UBP9YER098W CIT3P43635 486 aa5.42□□□□□ -1.54
UBP9YER098W FMS1P50264 508 aa5.42□□□□□ -1.54
UBP9YER098W GLE1Q12315 538 aa5.42□□□□□ -1.54
UBP9YER098W URB1P34241 1764 aaKnown RBP5.42□□□□□ -1.54
UBP9YER098W CDC8P00572 216 aa5.41□□□□□ -1.54
UBP9YER098W MIS1P09440 975 aaKnown RBP5.41□□□□□ -1.54
UBP9YER098W SWI4P25302 1093 aaKnown RBP5.41□□□□□ -1.54
UBP9YER098W SAC6P32599 642 aaKnown RBP5.41□□□□□ -1.54
UBP9YER098W YHR078WP38799 552 aa5.41□□□□□ -1.54
UBP9YER098W REV7P38927 245 aa5.41□□□□□ -1.54
UBP9YER098W MAM1P40065 302 aa5.41□□□□□ -1.54
UBP9YER098W GVP36P40531 326 aaKnown RBP5.41□□□□□ -1.54
UBP9YER098W PIB2P53191 635 aa5.41□□□□□ -1.54
UBP9YER098W BUD9P53226 547 aa5.41□□□□□ -1.54
UBP9YER098W ASI1P54074 624 aa5.41□□□□□ -1.54
UBP9YER098W HCR1Q05775 265 aaKnown RBP5.41□□□□□ -1.54
UBP9YER098W CSR1Q06705 408 aaKnown RBP5.41□□□□□ -1.54
UBP9YER098W TSR1Q07381 788 aaKnown RBP5.41□□□□□ -1.54
UBP9YER098W IWR1Q07532 353 aaPredicted RBP5.41□□□□□ -1.54
UBP9YER098W PSK2Q08217 1101 aa5.41□□□□□ -1.54
UBP9YER098W VHS3Q08438 674 aa5.41□□□□□ -1.54
UBP9YER098W ABP140Q08641 628 aaKnown RBP5.41□□□□□ -1.54
UBP9YER098W VPS5Q92331 675 aa5.41□□□□□ -1.54
UBP9YER098W SIR1P21691 654 aa5.41□□□□□ -1.54
UBP9YER098W CNS1P33313 385 aa5.41□□□□□ -1.54
UBP9YER098W DHR2P36009 735 aaPredicted RBP5.41□□□□□ -1.54
UBP9YER098W YHR033WP38690 423 aa5.41□□□□□ -1.54
UBP9YER098W ERC1P38767 581 aa5.41□□□□□ -1.54
UBP9YER098W CTF8P38877 133 aa5.41□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms