RNA–Protein interactions for RNA: YEL024W

RIP1, Transcript of Ubiquinol-cytochrome-c reductase, yeast

Gene RIP1, Length 648 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIP1	YEL024W	ALT1	P52893	592 aa		4.61	□□□□□ -1.67
RIP1	YEL024W	YGL108C	P53139	140 aa		4.61	□□□□□ -1.67
RIP1	YEL024W	YGL039W	P53183	348 aa	Known RBP	4.61	□□□□□ -1.67
RIP1	YEL024W	VPS9	P54787	451 aa		4.61	□□□□□ -1.67
RIP1	YEL024W	TMA20	P89886	181 aa	Predicted RBP	4.61	□□□□□ -1.67
RIP1	YEL024W	SLD5	Q03406	294 aa		4.61	□□□□□ -1.67
RIP1	YEL024W	MZM1	Q03429	123 aa	Predicted RBP	4.61	□□□□□ -1.67
RIP1	YEL024W	CWC15	Q03772	175 aa	Known RBP	4.61	□□□□□ -1.67
RIP1	YEL024W	TVP15	Q03860	143 aa		4.61	□□□□□ -1.67
RIP1	YEL024W	RKM2	Q03942	479 aa		4.61	□□□□□ -1.67
RIP1	YEL024W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
RIP1	YEL024W	AAD15	Q08361	143 aa		4.61	□□□□□ -1.67
RIP1	YEL024W	VIK1	Q12045	647 aa		4.61	□□□□□ -1.67
RIP1	YEL024W	CFT2	Q12102	859 aa	Predicted RBP	4.61	□□□□□ -1.67
RIP1	YEL024W	TRM11	Q12463	433 aa		4.61	□□□□□ -1.67
RIP1	YEL024W	ADF1	Q2V2Q1	113 aa		4.61	□□□□□ -1.67
RIP1	YEL024W	RGS2	Q99188	309 aa		4.61	□□□□□ -1.67
RIP1	YEL024W	ENO2	P00925	437 aa	Known RBP	4.6	□□□□□ -1.67
RIP1	YEL024W	WHI2	P12611	486 aa		4.6	□□□□□ -1.67
RIP1	YEL024W	MSD1	P15179	658 aa	Known RBP	4.6	□□□□□ -1.67
RIP1	YEL024W	PRP6	P19735	899 aa	Predicted RBP	4.6	□□□□□ -1.67
RIP1	YEL024W	AMD2	P22580	549 aa		4.6	□□□□□ -1.67
RIP1	YEL024W	MCM5	P29496	775 aa	Known RBP	4.6	□□□□□ -1.67
RIP1	YEL024W	MET22	P32179	357 aa		4.6	□□□□□ -1.67
RIP1	YEL024W	DGR2	P32330	852 aa		4.6	□□□□□ -1.67
RIP1	YEL024W	HEM12	P32347	362 aa	Predicted RBP	4.6	□□□□□ -1.67
RIP1	YEL024W	RPC82	P32349	654 aa		4.6	□□□□□ -1.67
RIP1	YEL024W	IXR1	P33417	597 aa		4.6	□□□□□ -1.67
RIP1	YEL024W	SRB2	P34162	210 aa		4.6	□□□□□ -1.67
RIP1	YEL024W	AST1	P35183	429 aa		4.6	□□□□□ -1.67
RIP1	YEL024W	YKR015C	P36111	568 aa		4.6	□□□□□ -1.67
RIP1	YEL024W	RDH54	P38086	958 aa		4.6	□□□□□ -1.67
RIP1	YEL024W	RIM2	P38127	377 aa		4.6	□□□□□ -1.67
RIP1	YEL024W	YBL036C	P38197	257 aa		4.6	□□□□□ -1.67
RIP1	YEL024W	TRM5	P38793	499 aa		4.6	□□□□□ -1.67
RIP1	YEL024W	AIM18	P38884	321 aa		4.6	□□□□□ -1.67
RIP1	YEL024W	PEA2	P40091	420 aa		4.6	□□□□□ -1.67
RIP1	YEL024W	PEP8	P40335	379 aa		4.6	□□□□□ -1.67
RIP1	YEL024W	ACF4	P47129	309 aa		4.6	□□□□□ -1.67
RIP1	YEL024W	CSN12	P47130	423 aa		4.6	□□□□□ -1.67
RIP1	YEL024W	MNP1	P53163	194 aa	Predicted RBP	4.6	□□□□□ -1.67
RIP1	YEL024W	PEX31	P53203	462 aa		4.6	□□□□□ -1.67
RIP1	YEL024W	YGR016W	P53209	190 aa		4.6	□□□□□ -1.67
RIP1	YEL024W	NOP15	P53927	220 aa	Predicted RBP	4.6	□□□□□ -1.67
RIP1	YEL024W	DOS2	P54858	310 aa		4.6	□□□□□ -1.67
RIP1	YEL024W	RPM2	Q02773	1202 aa		4.6	□□□□□ -1.67
RIP1	YEL024W	CWC21	Q03375	135 aa	Known RBP	4.6	□□□□□ -1.67
RIP1	YEL024W	PUS5	Q06244	254 aa		4.6	□□□□□ -1.67
RIP1	YEL024W	YPR097W	Q06839	1073 aa		4.6	□□□□□ -1.67
RIP1	YEL024W	THI20	Q08224	551 aa		4.6	□□□□□ -1.67
RIP1	YEL024W	NRT1	Q08485	598 aa		4.6	□□□□□ -1.67
RIP1	YEL024W	YPR202W	Q08993	238 aa		4.6	□□□□□ -1.67
RIP1	YEL024W	SLP1	Q12232	587 aa		4.6	□□□□□ -1.67
RIP1	YEL024W	ATG34	Q12292	412 aa		4.6	□□□□□ -1.67
RIP1	YEL024W	EMP46	Q12396	444 aa		4.6	□□□□□ -1.67
RIP1	YEL024W	IZH4	Q99393	312 aa		4.6	□□□□□ -1.67
RIP1	YEL024W	ERR1	P0CX10	437 aa		4.59	□□□□□ -1.67
RIP1	YEL024W	ERR2	P0CX11	437 aa		4.59	□□□□□ -1.67
RIP1	YEL024W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
RIP1	YEL024W	ADE2	P21264	571 aa	Known RBP	4.59	□□□□□ -1.67
RIP1	YEL024W	TSR4	P25040	408 aa		4.59	□□□□□ -1.67
RIP1	YEL024W	YDJ1	P25491	409 aa	Known RBP	4.59	□□□□□ -1.67
RIP1	YEL024W	VBA3	P25594	458 aa		4.59	□□□□□ -1.67
RIP1	YEL024W	MSH2	P25847	964 aa		4.59	□□□□□ -1.67
RIP1	YEL024W	RAD14	P28519	371 aa		4.59	□□□□□ -1.67
RIP1	YEL024W	NDI1	P32340	513 aa		4.59	□□□□□ -1.67
RIP1	YEL024W	PHA2	P32452	334 aa		4.59	□□□□□ -1.67
RIP1	YEL024W	SMY2	P32909	740 aa	Known RBP	4.59	□□□□□ -1.67
RIP1	YEL024W	MRP8	P35719	219 aa		4.59	□□□□□ -1.67
RIP1	YEL024W	VBA5	P36172	582 aa		4.59	□□□□□ -1.67
RIP1	YEL024W	IES5	P40060	125 aa		4.59	□□□□□ -1.67
RIP1	YEL024W	CAB2	P40506	365 aa		4.59	□□□□□ -1.67
RIP1	YEL024W	ERR3	P42222	437 aa		4.59	□□□□□ -1.67
RIP1	YEL024W	TAH11	P47112	604 aa		4.59	□□□□□ -1.67
RIP1	YEL024W	COG2	P53271	262 aa		4.59	□□□□□ -1.67
RIP1	YEL024W	SQS1	P53866	767 aa	Known RBP	4.59	□□□□□ -1.67
RIP1	YEL024W	SRL4	Q03085	281 aa		4.59	□□□□□ -1.67
RIP1	YEL024W	RLI1	Q03195	608 aa	Known RBP	4.59	□□□□□ -1.67
RIP1	YEL024W	YDR476C	Q03362	224 aa		4.59	□□□□□ -1.67
RIP1	YEL024W	TIF35	Q04067	274 aa	Known RBP	4.59	□□□□□ -1.67
RIP1	YEL024W	BUD22	Q04347	519 aa	Known RBP	4.59	□□□□□ -1.67
RIP1	YEL024W	YMR226C	Q05016	267 aa	Known RBP	4.59	□□□□□ -1.67
RIP1	YEL024W	JIP5	Q06214	492 aa	Predicted RBP	4.59	□□□□□ -1.67
RIP1	YEL024W	YDL121C	Q07541	149 aa		4.59	□□□□□ -1.67
RIP1	YEL024W	PSR1	Q07800	427 aa		4.59	□□□□□ -1.67
RIP1	YEL024W	MSC6	Q08818	692 aa	Known RBP	4.59	□□□□□ -1.67
RIP1	YEL024W	YPR027C	Q12079	277 aa		4.59	□□□□□ -1.67
RIP1	YEL024W	NSL1	Q12143	216 aa		4.59	□□□□□ -1.67
RIP1	YEL024W	TY3A-G	Q12173	290 aa		4.59	□□□□□ -1.67
RIP1	YEL024W	EFG1	Q3E705	233 aa	Known RBP	4.59	□□□□□ -1.67
RIP1	YEL024W	TY3A-I	Q99219	290 aa		4.59	□□□□□ -1.67
RIP1	YEL024W	NHA1	Q99271	985 aa		4.59	□□□□□ -1.67
RIP1	YEL024W	CAR1	P00812	333 aa	Known RBP	4.58	□□□□□ -1.68
RIP1	YEL024W	TEF1	P02994	458 aa	Known RBP	4.58	□□□□□ -1.68
RIP1	YEL024W	YAK1	P14680	807 aa		4.58	□□□□□ -1.68
RIP1	YEL024W	HSC82	P15108	705 aa	Known RBP	4.58	□□□□□ -1.68
RIP1	YEL024W	GFD2	P25370	566 aa	Known RBP	4.58	□□□□□ -1.68
RIP1	YEL024W	RAD51	P25454	400 aa		4.58	□□□□□ -1.68
RIP1	YEL024W	PRR1	P28708	518 aa		4.58	□□□□□ -1.68
RIP1	YEL024W	CYM1	P32898	989 aa		4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms