RNA–Protein interactions for RNA: YDR504C

SPG3, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG3, Length 384 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG3YDR504C UBP16Q02863 499 aa2.12□□□□□ -2.07
SPG3YDR504C TLG2Q08144 397 aa2.12□□□□□ -2.07
SPG3YDR504C GSH1P32477 678 aa2.11□□□□□ -2.07
SPG3YDR504C NOP2P40991 618 aaKnown RBP2.11□□□□□ -2.07
SPG3YDR504C RET2P43621 546 aa2.11□□□□□ -2.07
SPG3YDR504C APJ1P53940 528 aa2.11□□□□□ -2.07
SPG3YDR504C PLM2Q04383 521 aa2.11□□□□□ -2.07
SPG3YDR504C CHO2P05374 869 aaKnown RBP2.1□□□□□ -2.07
SPG3YDR504C CPR3P25719 182 aa2.1□□□□□ -2.07
SPG3YDR504C SEC65P29478 273 aa2.1□□□□□ -2.07
SPG3YDR504C RMA1P36001 430 aaKnown RBP2.1□□□□□ -2.07
SPG3YDR504C IZH1Q03419 316 aa2.1□□□□□ -2.07
SPG3YDR504C YLR001CQ07895 862 aa2.1□□□□□ -2.07
SPG3YDR504C APL5Q08951 932 aaKnown RBP2.1□□□□□ -2.07
SPG3YDR504C LCB4Q12246 624 aa2.1□□□□□ -2.07
SPG3YDR504C YML002WP0CF17 737 aa2.09□□□□□ -2.07
SPG3YDR504C CDC26P14724 124 aa2.09□□□□□ -2.07
SPG3YDR504C SDH8P38345 138 aa2.09□□□□□ -2.07
SPG3YDR504C ARN1P38731 627 aa2.09□□□□□ -2.07
SPG3YDR504C VPS8P39702 1274 aa2.09□□□□□ -2.07
SPG3YDR504C ORC5P50874 479 aa2.09□□□□□ -2.07
SPG3YDR504C CUL3P53202 744 aa2.09□□□□□ -2.07
SPG3YDR504C YLR112WQ12130 139 aa2.09□□□□□ -2.07
SPG3YDR504C TUF1P02992 437 aaKnown RBP2.08□□□□□ -2.08
SPG3YDR504C PLC1P32383 869 aa2.08□□□□□ -2.08
SPG3YDR504C MF(ALPHA)2P32435 120 aa2.08□□□□□ -2.08
SPG3YDR504C LAS21P40367 830 aa2.08□□□□□ -2.08
SPG3YDR504C UBP7P40453 1071 aa2.08□□□□□ -2.08
SPG3YDR504C ASG1P40467 964 aa2.08□□□□□ -2.08
SPG3YDR504C VID28P40547 921 aa2.08□□□□□ -2.08
SPG3YDR504C YML053CQ04978 212 aa2.08□□□□□ -2.08
SPG3YDR504C TAH18Q12181 623 aa2.08□□□□□ -2.08
SPG3YDR504C YBR298C-AQ8TGK4 73 aa2.08□□□□□ -2.08
SPG3YDR504C AVT5P38176 459 aa2.07□□□□□ -2.08
SPG3YDR504C RRT2P38332 387 aa2.07□□□□□ -2.08
SPG3YDR504C EFM2P38347 419 aa2.07□□□□□ -2.08
SPG3YDR504C YHR218WP38899 603 aa2.07□□□□□ -2.08
SPG3YDR504C YJL070CP40361 888 aa2.07□□□□□ -2.08
SPG3YDR504C NUP82P40368 713 aa2.07□□□□□ -2.08
SPG3YDR504C PBP2P38151 413 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
SPG3YDR504C FAT1P38225 669 aa2.06□□□□□ -2.08
SPG3YDR504C HXT6P39003 570 aaKnown RBP2.06□□□□□ -2.08
SPG3YDR504C HXT7P39004 570 aa2.06□□□□□ -2.08
SPG3YDR504C MAM1P40065 302 aa2.06□□□□□ -2.08
SPG3YDR504C VPS25P47142 202 aa2.06□□□□□ -2.08
SPG3YDR504C ESBP6P53918 673 aa2.06□□□□□ -2.08
SPG3YDR504C YLR125WQ12138 136 aa2.06□□□□□ -2.08
SPG3YDR504C SES1P07284 462 aaKnown RBP2.05□□□□□ -2.08
SPG3YDR504C PHO8P11491 566 aa2.05□□□□□ -2.08
SPG3YDR504C HNM1P19807 563 aa2.05□□□□□ -2.08
SPG3YDR504C LDB16P25587 256 aa2.05□□□□□ -2.08
SPG3YDR504C VPS41P38959 992 aa2.05□□□□□ -2.08
SPG3YDR504C MKT1P40850 830 aaKnown RBP2.05□□□□□ -2.08
SPG3YDR504C PSP1P50896 841 aaKnown RBP2.05□□□□□ -2.08
SPG3YDR504C YGL036WP53185 909 aaPredicted RBP2.05□□□□□ -2.08
SPG3YDR504C ARP9Q05123 467 aa2.05□□□□□ -2.08
SPG3YDR504C NTG2Q08214 380 aa2.05□□□□□ -2.08
SPG3YDR504C SEC12P11655 471 aa2.04□□□□□ -2.08
SPG3YDR504C PMS1P14242 873 aa2.04□□□□□ -2.08
SPG3YDR504C THI4P32318 326 aa2.04□□□□□ -2.08
SPG3YDR504C SWH1P35845 1188 aa2.04□□□□□ -2.08
SPG3YDR504C RRP8P38961 392 aaKnown RBP2.04□□□□□ -2.08
SPG3YDR504C SQS1P53866 767 aaKnown RBP2.04□□□□□ -2.08
SPG3YDR504C YDL242WQ07746 117 aa2.04□□□□□ -2.08
SPG3YDR504C CBP3P21560 335 aa2.03□□□□□ -2.08
SPG3YDR504C OAF3P36023 863 aa2.03□□□□□ -2.08
SPG3YDR504C YAT1P80235 687 aa2.03□□□□□ -2.08
SPG3YDR504C YMR254CQ04838 102 aa2.03□□□□□ -2.08
SPG3YDR504C MGS1P40151 587 aa2.02□□□□□ -2.09
SPG3YDR504C BUD6P41697 788 aa2.02□□□□□ -2.09
SPG3YDR504C YGR153WP48238 217 aa2.02□□□□□ -2.09
SPG3YDR504C RPN4Q03465 531 aa2.02□□□□□ -2.09
SPG3YDR504C FAB1P34756 2278 aa2.02□□□□□ -2.09
SPG3YDR504C CYB2P00175 591 aa2.01□□□□□ -2.09
SPG3YDR504C CBS2P14905 389 aa2.01□□□□□ -2.09
SPG3YDR504C PDA1P16387 420 aaKnown RBP2.01□□□□□ -2.09
SPG3YDR504C MSS51P32335 436 aa2.01□□□□□ -2.09
SPG3YDR504C HES1P35843 434 aa2.01□□□□□ -2.09
SPG3YDR504C ECM9Q02202 377 aa2.01□□□□□ -2.09
SPG3YDR504C YHM2Q04013 314 aa2.01□□□□□ -2.09
SPG3YDR504C PDR8Q06149 701 aa2.01□□□□□ -2.09
SPG3YDR504C CSR2Q12734 1121 aa2.01□□□□□ -2.09
SPG3YDR504C RPS21AP0C0V8 87 aaKnown RBP2□□□□□ -2.09
SPG3YDR504C PRO3P32263 286 aaKnown RBP2□□□□□ -2.09
SPG3YDR504C CKB2P38930 258 aa2□□□□□ -2.09
SPG3YDR504C YJR096WP47137 282 aa2□□□□□ -2.09
SPG3YDR504C COS12P53053 380 aa2□□□□□ -2.09
SPG3YDR504C PEF1P53238 335 aa2□□□□□ -2.09
SPG3YDR504C YNL193WP53870 558 aa2□□□□□ -2.09
SPG3YDR504C HFI1Q12060 488 aa2□□□□□ -2.09
SPG3YDR504C DAP1Q12091 152 aa2□□□□□ -2.09
SPG3YDR504C DGR2P32330 852 aa1.99□□□□□ -2.09
SPG3YDR504C ARO9P38840 513 aaPredicted RBP1.99□□□□□ -2.09
SPG3YDR504C TPA1P40032 644 aaKnown RBP1.99□□□□□ -2.09
SPG3YDR504C CDC1P40986 491 aa1.99□□□□□ -2.09
SPG3YDR504C SPG5P42933 373 aa1.99□□□□□ -2.09
SPG3YDR504C EAF7P53911 425 aaKnown RBP1.99□□□□□ -2.09
SPG3YDR504C CAC2Q04199 468 aa1.99□□□□□ -2.09
SPG3YDR504C ECI1Q05871 280 aa1.99□□□□□ -2.09
SPG3YDR504C POS5Q06892 414 aa1.99□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms