RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	YDR328C	AFI1	Q99222	893 aa		7.44	□□□□□ -1.22
SKP1	YDR328C	RPB2	P08518	1224 aa	Known RBP	7.43	□□□□□ -1.22
SKP1	YDR328C	GID7	P25569	745 aa		7.43	□□□□□ -1.22
SKP1	YDR328C	PAT1	P25644	796 aa	Known RBP	7.43	□□□□□ -1.22
SKP1	YDR328C	MSH1	P25846	959 aa		7.43	□□□□□ -1.22
SKP1	YDR328C	SGE1	P33335	543 aa		7.43	□□□□□ -1.22
SKP1	YDR328C	KES1	P35844	434 aa	Known RBP	7.43	□□□□□ -1.22
SKP1	YDR328C	OAF3	P36023	863 aa		7.43	□□□□□ -1.22
SKP1	YDR328C	SMF2	P38778	549 aa		7.43	□□□□□ -1.22
SKP1	YDR328C	ELO3	P40319	345 aa		7.43	□□□□□ -1.22
SKP1	YDR328C	DPH1	P40487	425 aa	Known RBP	7.43	□□□□□ -1.22
SKP1	YDR328C	RRN7	P40992	514 aa		7.43	□□□□□ -1.22
SKP1	YDR328C	BST1	P43571	1029 aa		7.43	□□□□□ -1.22
SKP1	YDR328C	PRP24	P49960	444 aa	Known RBP	7.43	□□□□□ -1.22
SKP1	YDR328C	ZIP2	P53061	704 aa		7.43	□□□□□ -1.22
SKP1	YDR328C	GND2	P53319	492 aa		7.43	□□□□□ -1.22
SKP1	YDR328C	SLT2	Q00772	484 aa		7.43	□□□□□ -1.22
SKP1	YDR328C	MET14	Q02196	202 aa		7.43	□□□□□ -1.22
SKP1	YDR328C	YPL014W	Q02606	381 aa		7.43	□□□□□ -1.22
SKP1	YDR328C	LEE1	Q02799	301 aa	Known RBP	7.43	□□□□□ -1.22
SKP1	YDR328C	RPN4	Q03465	531 aa		7.43	□□□□□ -1.22
SKP1	YDR328C	ADI1	Q03677	179 aa		7.43	□□□□□ -1.22
SKP1	YDR328C	ADE13	Q05911	482 aa	Known RBP	7.43	□□□□□ -1.22
SKP1	YDR328C	HOS1	Q12214	470 aa		7.43	□□□□□ -1.22
SKP1	YDR328C	OCA6	Q12454	224 aa		7.43	□□□□□ -1.22
SKP1	YDR328C	COX5A	P00424	153 aa		7.42	□□□□□ -1.22
SKP1	YDR328C	TEF1	P02994	458 aa	Known RBP	7.42	□□□□□ -1.22
SKP1	YDR328C	PSE1	P32337	1089 aa	Known RBP	7.42	□□□□□ -1.22
SKP1	YDR328C	SET3	P36124	751 aa		7.42	□□□□□ -1.22
SKP1	YDR328C	OYE3	P41816	400 aa	Predicted RBP	7.42	□□□□□ -1.22
SKP1	YDR328C	ROK1	P45818	564 aa	Predicted RBP	7.42	□□□□□ -1.22
SKP1	YDR328C	YVH1	Q02256	364 aa	Known RBP	7.42	□□□□□ -1.22
SKP1	YDR328C	NSE5	Q03718	556 aa		7.42	□□□□□ -1.22
SKP1	YDR328C	YDR344C	Q05510	147 aa		7.42	□□□□□ -1.22
SKP1	YDR328C	TDA5	Q06417	326 aa	Known RBP	7.42	□□□□□ -1.22
SKP1	YDR328C	UBR1	P19812	1950 aa		7.41	□□□□□ -1.22
SKP1	YDR328C	AAT2	P23542	418 aa	Known RBP	7.41	□□□□□ -1.22
SKP1	YDR328C	YCR051W	P25631	222 aa		7.41	□□□□□ -1.22
SKP1	YDR328C	HEM12	P32347	362 aa	Predicted RBP	7.41	□□□□□ -1.22
SKP1	YDR328C	KAR9	P32526	644 aa		7.41	□□□□□ -1.22
SKP1	YDR328C	SMI1	P32566	505 aa		7.41	□□□□□ -1.22
SKP1	YDR328C	KTR4	P38131	464 aa		7.41	□□□□□ -1.22
SKP1	YDR328C	SPC97	P38863	823 aa		7.41	□□□□□ -1.22
SKP1	YDR328C	YFL012W	P43580	148 aa		7.41	□□□□□ -1.22
SKP1	YDR328C	ASN2	P49090	572 aa	Known RBP	7.41	□□□□□ -1.22
SKP1	YDR328C	TUB4	P53378	473 aa		7.41	□□□□□ -1.22
SKP1	YDR328C	LSC1	P53598	329 aa	Known RBP	7.41	□□□□□ -1.22
SKP1	YDR328C	RPL34A	P87262	121 aa	Predicted RBP	7.41	□□□□□ -1.22
SKP1	YDR328C	TOF2	Q02208	771 aa		7.41	□□□□□ -1.22
SKP1	YDR328C	YCS4	Q06156	1176 aa		7.41	□□□□□ -1.22
SKP1	YDR328C	OMS1	Q06668	471 aa		7.41	□□□□□ -1.22
SKP1	YDR328C	SGO1	Q08490	590 aa		7.41	□□□□□ -1.22
SKP1	YDR328C	NDD1	Q08887	554 aa		7.41	□□□□□ -1.22
SKP1	YDR328C	CCH1	P50077	2039 aa		7.4	□□□□□ -1.22
SKP1	YDR328C	REV1	P12689	985 aa		7.4	□□□□□ -1.22
SKP1	YDR328C	HSP60	P19882	572 aa	Known RBP	7.4	□□□□□ -1.22
SKP1	YDR328C	URA10	P30402	227 aa		7.4	□□□□□ -1.22
SKP1	YDR328C	MRS6	P32864	603 aa	Known RBP	7.4	□□□□□ -1.22
SKP1	YDR328C	ADD66	P36040	267 aa		7.4	□□□□□ -1.22
SKP1	YDR328C	APM3	P38153	483 aa		7.4	□□□□□ -1.22
SKP1	YDR328C	SRP68	P38687	599 aa	Known RBP	7.4	□□□□□ -1.22
SKP1	YDR328C	STR3	P53101	465 aa	Known RBP	7.4	□□□□□ -1.22
SKP1	YDR328C	KTR5	P53966	522 aa	Predicted RBP	7.4	□□□□□ -1.22
SKP1	YDR328C	SLU7	Q02775	382 aa	Known RBP	7.4	□□□□□ -1.22
SKP1	YDR328C	RLI1	Q03195	608 aa	Known RBP	7.4	□□□□□ -1.22
SKP1	YDR328C	YMR206W	Q03695	313 aa		7.4	□□□□□ -1.22
SKP1	YDR328C	SEG1	Q04279	960 aa		7.4	□□□□□ -1.22
SKP1	YDR328C	SLD7	Q08457	257 aa		7.4	□□□□□ -1.22
SKP1	YDR328C	PGC1	Q08959	321 aa		7.4	□□□□□ -1.22
SKP1	YDR328C	GPA2	P10823	449 aa		7.39	□□□□□ -1.23
SKP1	YDR328C	HSF1	P10961	833 aa		7.39	□□□□□ -1.23
SKP1	YDR328C	INO1	P11986	533 aa		7.39	□□□□□ -1.23
SKP1	YDR328C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	7.39	□□□□□ -1.23	not detected
SKP1	YDR328C	AMS1	P22855	1083 aa		7.39	□□□□□ -1.23
SKP1	YDR328C	ETR1	P38071	380 aa		7.39	□□□□□ -1.23
SKP1	YDR328C	YHL041W	P38730	149 aa		7.39	□□□□□ -1.23
SKP1	YDR328C	EXO1	P39875	702 aa		7.39	□□□□□ -1.23
SKP1	YDR328C	HEM14	P40012	539 aa		7.39	□□□□□ -1.23
SKP1	YDR328C	IST3	P40565	148 aa	Predicted RBP	7.39	□□□□□ -1.23
SKP1	YDR328C	TRF5	P48561	642 aa	Known RBP	7.39	□□□□□ -1.23
SKP1	YDR328C	YNR063W	P53749	607 aa		7.39	□□□□□ -1.23
SKP1	YDR328C	TEP1	P53916	434 aa		7.39	□□□□□ -1.23
SKP1	YDR328C	SIW14	P53965	281 aa		7.39	□□□□□ -1.23
SKP1	YDR328C	CDC14	Q00684	551 aa		7.39	□□□□□ -1.23
SKP1	YDR328C	PML39	Q03760	334 aa		7.39	□□□□□ -1.23
SKP1	YDR328C	UTP13	Q05946	817 aa	Known RBP	7.39	□□□□□ -1.23
SKP1	YDR328C	YET3	Q07451	203 aa		7.39	□□□□□ -1.23
SKP1	YDR328C	NCA2	Q12374	616 aa		7.39	□□□□□ -1.23
SKP1	YDR328C	ENO1	P00924	437 aa	Known RBP	7.38	□□□□□ -1.23
SKP1	YDR328C	SRV2	P17555	526 aa	Known RBP	7.38	□□□□□ -1.23
SKP1	YDR328C	YCL068C	P25593	260 aa		7.38	□□□□□ -1.23
SKP1	YDR328C	KIP2	P28743	706 aa		7.38	□□□□□ -1.23
SKP1	YDR328C	NDI1	P32340	513 aa		7.38	□□□□□ -1.23
SKP1	YDR328C	PEX5	P35056	612 aa		7.38	□□□□□ -1.23
SKP1	YDR328C	MRPL40	P36534	297 aa		7.38	□□□□□ -1.23
SKP1	YDR328C	BUD13	P46947	266 aa	Predicted RBP	7.38	□□□□□ -1.23
SKP1	YDR328C	CCT8	P47079	568 aa	Known RBP	7.38	□□□□□ -1.23
SKP1	YDR328C	AMA1	P50082	593 aa		7.38	□□□□□ -1.23
SKP1	YDR328C	DOS2	P54858	310 aa		7.38	□□□□□ -1.23
SKP1	YDR328C	BUD22	Q04347	519 aa	Known RBP	7.38	□□□□□ -1.23

Retrieved 100 of 5,963 RNA–protein pairs in 59.8 ms