RNA–Protein interactions for RNA: YDR213W

UPC2, Transcript of Sterol regulatory element binding protein, yeast

Gene UPC2, Length 2,742 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UPC2	YDR213W	YOR342C	Q12182	319 aa		4.38	□□□□□ -1.71
UPC2	YDR213W	AI5_ALPHA	Q9ZZX1	630 aa		4.38	□□□□□ -1.71
UPC2	YDR213W	MF(ALPHA)1	P01149	165 aa		4.38	□□□□□ -1.71
UPC2	YDR213W	SNF4	P12904	322 aa		4.38	□□□□□ -1.71
UPC2	YDR213W	CAF20	P12962	161 aa	Known RBP	4.38	□□□□□ -1.71
UPC2	YDR213W	RET1	P22276	1149 aa	Known RBP	4.38	□□□□□ -1.71
UPC2	YDR213W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.38	□□□□□ -1.71	not detected
UPC2	YDR213W	ZIP1	P31111	875 aa		4.38	□□□□□ -1.71
UPC2	YDR213W	SAC1	P32368	623 aa	Known RBP	4.38	□□□□□ -1.71
UPC2	YDR213W	PEP7	P32609	515 aa		4.38	□□□□□ -1.71
UPC2	YDR213W	GDA1	P32621	518 aa		4.38	□□□□□ -1.71
UPC2	YDR213W	PGM2	P37012	569 aa	Known RBP	4.38	□□□□□ -1.71
UPC2	YDR213W	TBS1	P38114	1094 aa		4.38	□□□□□ -1.71
UPC2	YDR213W	GIP1	P38229	639 aa		4.38	□□□□□ -1.71
UPC2	YDR213W	ATG14	P38270	344 aa		4.38	□□□□□ -1.71
UPC2	YDR213W	YHR112C	P38716	378 aa		4.38	□□□□□ -1.71
UPC2	YDR213W	SPC72	P39723	622 aa		4.38	□□□□□ -1.71
UPC2	YDR213W	EMC2	P47133	292 aa	Known RBP	4.38	□□□□□ -1.71
UPC2	YDR213W	CLA4	P48562	842 aa		4.38	□□□□□ -1.71
UPC2	YDR213W	YML6	P51998	286 aa		4.38	□□□□□ -1.71
UPC2	YDR213W	DIP5	P53388	608 aa		4.38	□□□□□ -1.71
UPC2	YDR213W	ARE2	P53629	642 aa	Known RBP	4.38	□□□□□ -1.71
UPC2	YDR213W	SPC2	Q04969	178 aa		4.38	□□□□□ -1.71
UPC2	YDR213W	ISR1	Q06098	443 aa	Known RBP	4.38	□□□□□ -1.71
UPC2	YDR213W	YCS4	Q06156	1176 aa		4.38	□□□□□ -1.71
UPC2	YDR213W	SOG2	Q08817	791 aa		4.38	□□□□□ -1.71
UPC2	YDR213W	ATG29	Q12092	213 aa		4.38	□□□□□ -1.71
UPC2	YDR213W	PHM7	Q12252	991 aa		4.38	□□□□□ -1.71
UPC2	YDR213W	SCM3	Q12334	223 aa		4.38	□□□□□ -1.71
UPC2	YDR213W	YBR298C-A	Q8TGK4	73 aa		4.38	□□□□□ -1.71
UPC2	YDR213W	TEF1	P02994	458 aa	Known RBP	4.37	□□□□□ -1.71
UPC2	YDR213W	MOD5	P07884	428 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	VPS33	P20795	691 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	DAL2	P25335	343 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	TDP1	P38319	544 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	MMS21	P38632	267 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	FRT2	P39734	528 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	VNX1	P42839	908 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	VTC4	P47075	721 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	MSE1	P48525	536 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	COP1	P53622	1201 aa	Known RBP	4.37	□□□□□ -1.71
UPC2	YDR213W	YNR014W	P53719	212 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	REX2	P54964	269 aa	Known RBP	4.37	□□□□□ -1.71
UPC2	YDR213W	YMR099C	Q03161	297 aa	Known RBP	4.37	□□□□□ -1.71
UPC2	YDR213W	ABZ2	Q03266	374 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	JIP4	Q03361	876 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	TCO89	Q08921	799 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	SPE4	Q12455	300 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	REP1	P03871	373 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	RHO1	P06780	209 aa	Known RBP	4.37	□□□□□ -1.71
UPC2	YDR213W	ILS1	P09436	1072 aa	Known RBP	4.37	□□□□□ -1.71
UPC2	YDR213W	RPP1B	P10622	106 aa	Known RBP	4.37	□□□□□ -1.71
UPC2	YDR213W	STE6	P12866	1290 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	MRF1	P30775	413 aa	Predicted RBP	4.37	□□□□□ -1.71
UPC2	YDR213W	GUT2	P32191	649 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	NUP2	P32499	720 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	KAP104	P38217	918 aa	Known RBP	4.37	□□□□□ -1.71
UPC2	YDR213W	CBR1	P38626	284 aa	Known RBP	4.37	□□□□□ -1.71
UPC2	YDR213W	YHR078W	P38799	552 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	PES4	P39684	611 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	YJL181W	P46987	611 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	YTP1	P53584	459 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	ALG12	P53730	551 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	COG5	P53951	403 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	VPS9	P54787	451 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	ELP4	Q02884	456 aa	Known RBP	4.37	□□□□□ -1.71
UPC2	YDR213W	FUS2	Q05670	677 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	LOT6	Q07923	191 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	RKM1	Q08961	583 aa	Predicted RBP	4.37	□□□□□ -1.71
UPC2	YDR213W	YPL260W	Q08977	551 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	EMP46	Q12396	444 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	YML002W	P0CF17	737 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	KAR4	P25583	335 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	HIR2	P32480	875 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	YKL222C	P35995	705 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	EAP1	P36041	632 aa	Known RBP	4.37	□□□□□ -1.71
UPC2	YDR213W	YBR242W	P38331	238 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	YBR285W	P38354	144 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	NDT80	P38830	627 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	SEO1	P39709	593 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	RPS26A	P39938	119 aa	Known RBP	4.37	□□□□□ -1.71
UPC2	YDR213W	RPS26B	P39939	119 aa	Known RBP	4.37	□□□□□ -1.71
UPC2	YDR213W	SAH1	P39954	449 aa	Known RBP	4.37	□□□□□ -1.71
UPC2	YDR213W	RGD2	P43556	714 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	YJL055W	P47044	245 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	PEX8	P53248	589 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	TBF1	Q02457	562 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	IRC4	Q03036	179 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	YMR209C	Q03648	457 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	FMP42	Q04991	504 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	YMR226C	Q05016	267 aa	Known RBP	4.37	□□□□□ -1.71
UPC2	YDR213W	RTT10	Q08924	1013 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	LAP2	Q10740	671 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	MED1	Q12321	566 aa		4.37	□□□□□ -1.71
UPC2	YDR213W	KIN2	P13186	1147 aa	Known RBP	4.36	□□□□□ -1.71
UPC2	YDR213W	GRX2	P17695	143 aa	Known RBP	4.36	□□□□□ -1.71
UPC2	YDR213W	CHS3	P29465	1165 aa		4.36	□□□□□ -1.71
UPC2	YDR213W	MEI4	P29467	408 aa		4.36	□□□□□ -1.71
UPC2	YDR213W	SPR1	P32603	445 aa		4.36	□□□□□ -1.71
UPC2	YDR213W	NPR2	P39923	615 aa		4.36	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms