RNA–Protein interactions for RNA: YDR195W

REF2, Transcript of RNA-binding protein, yeast

Gene REF2, Length 1,602 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
REF2	YDR195W	YML119W	Q03208	357 aa		4.05	□□□□□ -1.76
REF2	YDR195W	NOP2	P40991	618 aa	Known RBP	4.04	□□□□□ -1.76
REF2	YDR195W	SCS3	P53012	380 aa		4.04	□□□□□ -1.76
REF2	YDR195W	UBP16	Q02863	499 aa		4.04	□□□□□ -1.76
REF2	YDR195W	TRS31	Q03337	283 aa		4.04	□□□□□ -1.76
REF2	YDR195W	PLM2	Q04383	521 aa		4.04	□□□□□ -1.76
REF2	YDR195W	ENT2	Q05785	613 aa		4.04	□□□□□ -1.76
REF2	YDR195W	YPR089W	O13585	888 aa		4.03	□□□□□ -1.76
REF2	YDR195W	MRC1	P25588	1096 aa		4.03	□□□□□ -1.76
REF2	YDR195W	TGL1	P34163	548 aa		4.03	□□□□□ -1.76
REF2	YDR195W	YLF2	P38746	405 aa		4.03	□□□□□ -1.76
REF2	YDR195W	LNP1	P38878	278 aa		4.03	□□□□□ -1.76
REF2	YDR195W	VFA1	P40080	203 aa		4.03	□□□□□ -1.76
REF2	YDR195W	YIL024C	P40543	189 aa		4.03	□□□□□ -1.76
REF2	YDR195W	PEX14	P53112	341 aa		4.03	□□□□□ -1.76
REF2	YDR195W	COP1	P53622	1201 aa	Known RBP	4.03	□□□□□ -1.76
REF2	YDR195W	AIM44	Q99299	758 aa		4.03	□□□□□ -1.76
REF2	YDR195W	YER190C-B	P0CX94	160 aa		4.03	□□□□□ -1.77
REF2	YDR195W	YEL077W-A	P0CX95	160 aa		4.03	□□□□□ -1.77
REF2	YDR195W	YGR296C-B	P0CX96	160 aa		4.03	□□□□□ -1.77
REF2	YDR195W	YPL283W-B	P0CX97	160 aa		4.03	□□□□□ -1.77
REF2	YDR195W	YPR204C-A	P0CX98	160 aa		4.03	□□□□□ -1.77
REF2	YDR195W	PHO3	P24031	467 aa		4.03	□□□□□ -1.77
REF2	YDR195W	COQ3	P27680	312 aa		4.03	□□□□□ -1.77
REF2	YDR195W	TFC4	P33339	1025 aa		4.03	□□□□□ -1.77
REF2	YDR195W	SDS22	P36047	338 aa		4.03	□□□□□ -1.77
REF2	YDR195W	IMD2	P38697	523 aa	Known RBP	4.03	□□□□□ -1.77
REF2	YDR195W	IMD3	P50095	523 aa	Known RBP	4.03	□□□□□ -1.77
REF2	YDR195W	MRPL1	Q04599	285 aa		4.03	□□□□□ -1.77
REF2	YDR195W	RAD34	Q06665	692 aa		4.03	□□□□□ -1.77
REF2	YDR195W	YDL242W	Q07746	117 aa		4.03	□□□□□ -1.77
REF2	YDR195W	YER175W-A	Q8TGU4	54 aa		4.03	□□□□□ -1.77
REF2	YDR195W	VAS1	P07806	1104 aa	Known RBP	4.02	□□□□□ -1.77
REF2	YDR195W	PRE2	P30656	287 aa	Known RBP	4.02	□□□□□ -1.77
REF2	YDR195W	ARO9	P38840	513 aa	Predicted RBP	4.02	□□□□□ -1.77
REF2	YDR195W	YMR124W	P39523	943 aa	Known RBP	4.02	□□□□□ -1.77
REF2	YDR195W	SAP1	P39955	897 aa	Known RBP	4.02	□□□□□ -1.77
REF2	YDR195W	SCS2	P40075	244 aa	Known RBP	4.02	□□□□□ -1.77
REF2	YDR195W	CIN1	P40987	1014 aa		4.02	□□□□□ -1.77
REF2	YDR195W	POL31	P46957	487 aa		4.02	□□□□□ -1.77
REF2	YDR195W	CNM67	P53865	581 aa	Known RBP	4.02	□□□□□ -1.77
REF2	YDR195W	LYS21	Q12122	440 aa	Known RBP	4.02	□□□□□ -1.77
REF2	YDR195W	STB2	P46679	850 aa		4.01	□□□□□ -1.77
REF2	YDR195W	SNU56	Q03782	492 aa	Known RBP	4.01	□□□□□ -1.77
REF2	YDR195W	CRD1	Q07560	283 aa		4.01	□□□□□ -1.77
REF2	YDR195W	RTC1	Q08281	1341 aa		4.01	□□□□□ -1.77
REF2	YDR195W	CTT1	P06115	562 aa		4	□□□□□ -1.77
REF2	YDR195W	SES1	P07284	462 aa	Known RBP	4	□□□□□ -1.77
REF2	YDR195W	ILS1	P09436	1072 aa	Known RBP	4	□□□□□ -1.77
REF2	YDR195W	MGM1	P32266	881 aa		4	□□□□□ -1.77
REF2	YDR195W	SAW1	P39735	261 aa		4	□□□□□ -1.77
REF2	YDR195W	AAT1	Q01802	451 aa		4	□□□□□ -1.77
REF2	YDR195W	TDA9	Q04545	1251 aa		4	□□□□□ -1.77
REF2	YDR195W	YML053C	Q04978	212 aa		4	□□□□□ -1.77
REF2	YDR195W	YPL191C	Q08930	360 aa		4	□□□□□ -1.77
REF2	YDR195W	NUR1	Q12066	484 aa		4	□□□□□ -1.77
REF2	YDR195W	GET3	Q12154	354 aa	Known RBP	3.99	□□□□□ -1.77
REF2	YDR195W	HER1	Q12276	1246 aa		3.99	□□□□□ -1.77
REF2	YDR195W	YPT1	P01123	206 aa	Known RBP	3.99	□□□□□ -1.77
REF2	YDR195W	PXL1	P36166	706 aa		3.99	□□□□□ -1.77
REF2	YDR195W	TOM71	P38825	639 aa	Known RBP	3.99	□□□□□ -1.77
REF2	YDR195W	ARB1	P40024	610 aa	Known RBP	3.99	□□□□□ -1.77
REF2	YDR195W	YAT1	P80235	687 aa		3.99	□□□□□ -1.77
REF2	YDR195W	VTC3	Q02725	835 aa		3.99	□□□□□ -1.77
REF2	YDR195W	VPS64	Q03944	604 aa		3.99	□□□□□ -1.77
REF2	YDR195W	CRF1	Q04930	467 aa		3.99	□□□□□ -1.77
REF2	YDR195W	YOR389W	Q08912	624 aa		3.99	□□□□□ -1.77
REF2	YDR195W	ADH4	P10127	382 aa		3.98	□□□□□ -1.77
REF2	YDR195W	VBA2	P38358	474 aa	Known RBP	3.98	□□□□□ -1.77
REF2	YDR195W	IMA5	P40884	581 aa		3.98	□□□□□ -1.77
REF2	YDR195W	RPL15B	P54780	204 aa	Predicted RBP	3.98	□□□□□ -1.77
REF2	YDR195W	ACS1	Q01574	713 aa		3.98	□□□□□ -1.77
REF2	YDR195W	ARA2	Q04212	335 aa		3.98	□□□□□ -1.77
REF2	YDR195W	AAD4	Q07747	329 aa		3.98	□□□□□ -1.77
REF2	YDR195W	YBR255C-A	Q3E776	120 aa		3.98	□□□□□ -1.77
REF2	YDR195W	AIM17	P23180	465 aa	Known RBP	3.97	□□□□□ -1.77
REF2	YDR195W	YCP4	P25349	247 aa	Known RBP	3.97	□□□□□ -1.77
REF2	YDR195W	RPS7A	P26786	190 aa	Known RBP	3.97	□□□□□ -1.77
REF2	YDR195W	RPF2	P36160	344 aa	Known RBP	3.97	□□□□□ -1.77
REF2	YDR195W	SWD1	P39706	426 aa		3.97	□□□□□ -1.77
REF2	YDR195W	PDE1	P22434	369 aa		3.96	□□□□□ -1.78
REF2	YDR195W	MEP2	P41948	499 aa		3.96	□□□□□ -1.78
REF2	YDR195W	ASK10	P48361	1146 aa		3.96	□□□□□ -1.78
REF2	YDR195W	LSC1	P53598	329 aa	Known RBP	3.96	□□□□□ -1.78
REF2	YDR195W	FOL1	P53848	824 aa		3.96	□□□□□ -1.78
REF2	YDR195W	YNL034W	P53963	612 aa		3.96	□□□□□ -1.78
REF2	YDR195W	AIM6	Q07716	390 aa		3.96	□□□□□ -1.78
REF2	YDR195W	SWC3	P31376	625 aa		3.95	□□□□□ -1.78
REF2	YDR195W	RPT3	P33298	428 aa	Known RBP	3.95	□□□□□ -1.78
REF2	YDR195W	ERC1	P38767	581 aa		3.95	□□□□□ -1.78
REF2	YDR195W	ERV46	P39727	415 aa		3.95	□□□□□ -1.78
REF2	YDR195W	NUP53	Q03790	475 aa		3.95	□□□□□ -1.78
REF2	YDR195W	ARP7	Q12406	477 aa		3.95	□□□□□ -1.78
REF2	YDR195W	GAL4	P04386	881 aa		3.95	□□□□□ -1.78
REF2	YDR195W	SSB1	P11484	613 aa	Known RBP	3.95	□□□□□ -1.78
REF2	YDR195W	FLO5	P38894	1075 aa		3.95	□□□□□ -1.78
REF2	YDR195W	SSB2	P40150	613 aa	Known RBP	3.95	□□□□□ -1.78
REF2	YDR195W	MDV1	P47025	714 aa		3.95	□□□□□ -1.78
REF2	YDR195W	ESF2	P53743	316 aa	Known RBP	3.95	□□□□□ -1.78
REF2	YDR195W	ATX2	Q12067	313 aa		3.95	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 25.5 ms