RNA–Protein interactions for RNA: YDL088C

ASM4, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene ASM4, Length 1,587 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASM4YDL088C ECM38Q05902 660 aaPredicted RBP3.41□□□□□ -1.86
ASM4YDL088C SNA4Q07549 140 aa3.41□□□□□ -1.86
ASM4YDL088C NEW1Q08972 1196 aaKnown RBP3.41□□□□□ -1.86
ASM4YDL088C AMD2P22580 549 aa3.4□□□□□ -1.87
ASM4YDL088C EMP65P40085 556 aa3.4□□□□□ -1.87
ASM4YDL088C CIN1P40987 1014 aa3.4□□□□□ -1.87
ASM4YDL088C RTK1Q12100 620 aaPredicted RBP3.4□□□□□ -1.87
ASM4YDL088C PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.4□□□□□ -1.87not detected
ASM4YDL088C YER175W-AQ8TGU4 54 aa3.4□□□□□ -1.87
ASM4YDL088C KAR1P11927 433 aa3.39□□□□□ -1.87
ASM4YDL088C RGT1P32862 1170 aa3.39□□□□□ -1.87
ASM4YDL088C SSP120P39931 234 aaKnown RBP3.39□□□□□ -1.87
ASM4YDL088C GSM1P42950 618 aa3.39□□□□□ -1.87
ASM4YDL088C MDV1P47025 714 aa3.39□□□□□ -1.87
ASM4YDL088C YNR071CP53757 342 aa3.39□□□□□ -1.87
ASM4YDL088C CTT1P06115 562 aa3.38□□□□□ -1.87
ASM4YDL088C MAK32P23060 363 aa3.38□□□□□ -1.87
ASM4YDL088C GCS1P35197 352 aa3.38□□□□□ -1.87
ASM4YDL088C RAD26P40352 1085 aa3.38□□□□□ -1.87
ASM4YDL088C YGL081WP53156 320 aa3.38□□□□□ -1.87
ASM4YDL088C YDL242WQ07746 117 aa3.38□□□□□ -1.87
ASM4YDL088C PEX15Q08215 383 aa3.38□□□□□ -1.87
ASM4YDL088C BUD7Q08754 746 aa3.38□□□□□ -1.87
ASM4YDL088C LCB4Q12246 624 aa3.38□□□□□ -1.87
ASM4YDL088C ATO2P32907 282 aa3.38□□□□□ -1.87
ASM4YDL088C KES1P35844 434 aaKnown RBP3.38□□□□□ -1.87
ASM4YDL088C YEN1P40028 759 aa3.38□□□□□ -1.87
ASM4YDL088C VFA1P40080 203 aa3.38□□□□□ -1.87
ASM4YDL088C MAD2P40958 196 aa3.38□□□□□ -1.87
ASM4YDL088C LYS20P48570 428 aaKnown RBP3.38□□□□□ -1.87
ASM4YDL088C RPL15BP54780 204 aaPredicted RBP3.38□□□□□ -1.87
ASM4YDL088C DIN7Q12086 430 aa3.38□□□□□ -1.87
ASM4YDL088C AIM17P23180 465 aaKnown RBP3.37□□□□□ -1.87
ASM4YDL088C HEM12P32347 362 aaPredicted RBP3.37□□□□□ -1.87
ASM4YDL088C ARO9P38840 513 aaPredicted RBP3.37□□□□□ -1.87
ASM4YDL088C UBP12P39538 1254 aa3.37□□□□□ -1.87
ASM4YDL088C NOP2P40991 618 aaKnown RBP3.37□□□□□ -1.87
ASM4YDL088C BOP3P53958 396 aa3.37□□□□□ -1.87
ASM4YDL088C PFA4Q12006 378 aa3.37□□□□□ -1.87
ASM4YDL088C LYS21Q12122 440 aaKnown RBP3.37□□□□□ -1.87
ASM4YDL088C PSF3Q12146 194 aa3.37□□□□□ -1.87
ASM4YDL088C ILV2P07342 687 aaKnown RBP3.36□□□□□ -1.87
ASM4YDL088C YCP4P25349 247 aaKnown RBP3.36□□□□□ -1.87
ASM4YDL088C PRE2P30656 287 aaKnown RBP3.36□□□□□ -1.87
ASM4YDL088C VPS8P39702 1274 aa3.36□□□□□ -1.87
ASM4YDL088C CRF1Q04930 467 aa3.36□□□□□ -1.87
ASM4YDL088C RAD34Q06665 692 aa3.36□□□□□ -1.87
ASM4YDL088C ATX2Q12067 313 aa3.36□□□□□ -1.87
ASM4YDL088C DBP10Q12389 995 aaKnown RBP3.36□□□□□ -1.87
ASM4YDL088C Q0010Q9ZZX9 128 aa3.36□□□□□ -1.87
ASM4YDL088C GAL4P04386 881 aa3.35□□□□□ -1.87
ASM4YDL088C YCR061WP25639 631 aa3.35□□□□□ -1.87
ASM4YDL088C SIP1P32578 815 aa3.35□□□□□ -1.87
ASM4YDL088C YBR071WP38243 211 aa3.35□□□□□ -1.87
ASM4YDL088C YAT2P40017 923 aa3.35□□□□□ -1.87
ASM4YDL088C YNL144CP53907 740 aa3.35□□□□□ -1.87
ASM4YDL088C ECM22Q05958 814 aaPredicted RBP3.35□□□□□ -1.87
ASM4YDL088C SRL1Q08673 210 aa3.35□□□□□ -1.87
ASM4YDL088C GET3Q12154 354 aaKnown RBP3.35□□□□□ -1.87
ASM4YDL088C UBX3Q12229 455 aa3.35□□□□□ -1.87
ASM4YDL088C SEC18P18759 758 aaKnown RBP3.34□□□□□ -1.87
ASM4YDL088C GND1P38720 489 aaKnown RBP3.34□□□□□ -1.87
ASM4YDL088C MAF1P41910 395 aa3.34□□□□□ -1.87
ASM4YDL088C YAT1P80235 687 aa3.34□□□□□ -1.87
ASM4YDL088C TRS31Q03337 283 aa3.34□□□□□ -1.87
ASM4YDL088C TMA17Q12513 150 aa3.34□□□□□ -1.87
ASM4YDL088C RPS7AP26786 190 aaKnown RBP3.34□□□□□ -1.88
ASM4YDL088C MSS51P32335 436 aa3.34□□□□□ -1.88
ASM4YDL088C RPF2P36160 344 aaKnown RBP3.34□□□□□ -1.88
ASM4YDL088C TAF5P38129 798 aa3.34□□□□□ -1.88
ASM4YDL088C TOM71P38825 639 aaKnown RBP3.34□□□□□ -1.88
ASM4YDL088C ORC5P50874 479 aa3.34□□□□□ -1.88
ASM4YDL088C VTC3Q02725 835 aa3.34□□□□□ -1.88
ASM4YDL088C TRI1Q05024 226 aa3.34□□□□□ -1.88
ASM4YDL088C DSE3Q08729 430 aa3.34□□□□□ -1.88
ASM4YDL088C RRI1Q12468 440 aa3.34□□□□□ -1.88
ASM4YDL088C KGD2P19262 463 aaPredicted RBP3.33□□□□□ -1.88
ASM4YDL088C PHO3P24031 467 aa3.33□□□□□ -1.88
ASM4YDL088C SWC3P31376 625 aa3.33□□□□□ -1.88
ASM4YDL088C VBA2P38358 474 aaKnown RBP3.33□□□□□ -1.88
ASM4YDL088C ERV46P39727 415 aa3.33□□□□□ -1.88
ASM4YDL088C SCS2P40075 244 aaKnown RBP3.33□□□□□ -1.88
ASM4YDL088C YPT11P48559 417 aa3.33□□□□□ -1.88
ASM4YDL088C YNL034WP53963 612 aa3.33□□□□□ -1.88
ASM4YDL088C PHM6Q05637 104 aa3.33□□□□□ -1.88
ASM4YDL088C YPL191CQ08930 360 aa3.33□□□□□ -1.88
ASM4YDL088C NUR1Q12066 484 aa3.33□□□□□ -1.88
ASM4YDL088C SES1P07284 462 aaKnown RBP3.32□□□□□ -1.88
ASM4YDL088C TFC4P33339 1025 aa3.32□□□□□ -1.88
ASM4YDL088C TGL1P34163 548 aa3.32□□□□□ -1.88
ASM4YDL088C SAW1P39735 261 aa3.32□□□□□ -1.88
ASM4YDL088C YJR120WP47157 116 aa3.32□□□□□ -1.88
ASM4YDL088C ACS1Q01574 713 aa3.32□□□□□ -1.88
ASM4YDL088C VAS1P07806 1104 aaKnown RBP3.31□□□□□ -1.88
ASM4YDL088C CNA1P23287 553 aa3.31□□□□□ -1.88
ASM4YDL088C PRP45P28004 379 aaPredicted RBP3.31□□□□□ -1.88
ASM4YDL088C SDS22P36047 338 aa3.31□□□□□ -1.88
ASM4YDL088C CCT4P39078 528 aaKnown RBP3.31□□□□□ -1.88
ASM4YDL088C ARB1P40024 610 aaKnown RBP3.31□□□□□ -1.88
ASM4YDL088C VPS64Q03944 604 aa3.31□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms