RNA–Protein interactions for RNA: YCR004C

YCP4, Transcript of Protein of unknown function, yeastyeast

Gene YCP4, Length 744 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCP4YCR004C PPN1Q04119 674 aa8.5□□□□□ -1.05
YCP4YCR004C SRO7Q12038 1033 aa8.5□□□□□ -1.05
YCP4YCR004C SUL2Q12325 893 aa8.5□□□□□ -1.05
YCP4YCR004C LEU1P07264 779 aaKnown RBP8.49□□□□□ -1.05
YCP4YCR004C ELO1P39540 310 aa8.49□□□□□ -1.05
YCP4YCR004C PAN6P40459 309 aa8.49□□□□□ -1.05
YCP4YCR004C AFI1Q99222 893 aa8.49□□□□□ -1.05
YCP4YCR004C TRM1P15565 570 aaKnown RBP8.48□□□□□ -1.05
YCP4YCR004C YEL028WP39989 153 aa8.48□□□□□ -1.05
YCP4YCR004C HXT8P40886 569 aa8.48□□□□□ -1.05
YCP4YCR004C MNN11P46985 422 aaKnown RBP8.48□□□□□ -1.05
YCP4YCR004C YJL132WP47014 750 aa8.48□□□□□ -1.05
YCP4YCR004C SPC105P53148 917 aa8.48□□□□□ -1.05
YCP4YCR004C YGR111WP53265 400 aa8.48□□□□□ -1.05
YCP4YCR004C YNL108CP53929 270 aa8.48□□□□□ -1.05
YCP4YCR004C YDR444WQ04093 687 aa8.48□□□□□ -1.05
YCP4YCR004C YDR222WQ04925 415 aa8.48□□□□□ -1.05
YCP4YCR004C LSP1Q12230 341 aaKnown RBP8.48□□□□□ -1.05
YCP4YCR004C RIP1P08067 215 aa8.47□□□□□ -1.05
YCP4YCR004C YKR104WP0CE69 306 aa8.47□□□□□ -1.05
YCP4YCR004C RED1P14291 827 aa8.47□□□□□ -1.05
YCP4YCR004C PMA2P19657 947 aa8.47□□□□□ -1.05
YCP4YCR004C MSH3P25336 1018 aa8.47□□□□□ -1.05
YCP4YCR004C CWP1P28319 239 aa8.47□□□□□ -1.05
YCP4YCR004C JNM1P36224 373 aa8.47□□□□□ -1.05
YCP4YCR004C SWC5P38326 303 aa8.47□□□□□ -1.05
YCP4YCR004C TMN3P40071 706 aa8.47□□□□□ -1.05
YCP4YCR004C RRN7P40992 514 aa8.47□□□□□ -1.05
YCP4YCR004C DLD2P46681 530 aaKnown RBP8.47□□□□□ -1.05
YCP4YCR004C RPS10BP46784 105 aaKnown RBP8.47□□□□□ -1.05
YCP4YCR004C TRF5P48561 642 aaKnown RBP8.47□□□□□ -1.05
YCP4YCR004C TRE2Q08693 809 aa8.47□□□□□ -1.05
YCP4YCR004C RPS10AQ08745 105 aaPredicted RBP8.47□□□□□ -1.05
YCP4YCR004C AIM44Q99299 758 aa8.47□□□□□ -1.05
YCP4YCR004C RPS6AP0CX37 236 aaKnown RBP8.46□□□□□ -1.06
YCP4YCR004C RPS6BP0CX38 236 aaPredicted RBP8.46□□□□□ -1.06
YCP4YCR004C SCH9P11792 824 aaKnown RBP8.46□□□□□ -1.06
YCP4YCR004C ABF1P14164 731 aa8.46□□□□□ -1.06
YCP4YCR004C EST1P17214 699 aaPredicted RBP8.46□□□□□ -1.06
YCP4YCR004C SNT1P25357 1226 aa8.46□□□□□ -1.06
YCP4YCR004C PAT1P25644 796 aaKnown RBP8.46□□□□□ -1.06
YCP4YCR004C YHL041WP38730 149 aa8.46□□□□□ -1.06
YCP4YCR004C LRP1P38801 184 aaKnown RBP8.46□□□□□ -1.06
YCP4YCR004C MMM1P41800 426 aa8.46□□□□□ -1.06
YCP4YCR004C TCB2P48231 1178 aa8.46□□□□□ -1.06
YCP4YCR004C POB3Q04636 552 aaKnown RBP8.46□□□□□ -1.06
YCP4YCR004C KAP95Q06142 861 aaKnown RBP8.46□□□□□ -1.06
YCP4YCR004C YLL032CQ07834 825 aaKnown RBP RIP-Chip data8.46□□□□□ -1.06not detected
YCP4YCR004C TMA16Q08687 178 aa8.46□□□□□ -1.06
YCP4YCR004C SEY1Q99287 776 aa8.46□□□□□ -1.06
YCP4YCR004C TRX1P22217 103 aaKnown RBP8.45□□□□□ -1.06
YCP4YCR004C MSR1P38714 643 aa8.45□□□□□ -1.06
YCP4YCR004C TAD1P53065 400 aa8.45□□□□□ -1.06
YCP4YCR004C MTO1P53070 669 aa8.45□□□□□ -1.06
YCP4YCR004C VAC7P53950 1165 aa8.45□□□□□ -1.06
YCP4YCR004C CDC55Q00362 526 aa8.45□□□□□ -1.06
YCP4YCR004C ERV41Q04651 352 aa8.45□□□□□ -1.06
YCP4YCR004C YOR389WQ08912 624 aa8.45□□□□□ -1.06
YCP4YCR004C YPL278CQ08990 100 aa8.45□□□□□ -1.06
YCP4YCR004C YDR061WQ12298 539 aa8.45□□□□□ -1.06
YCP4YCR004C EFG1Q3E705 233 aaKnown RBP8.45□□□□□ -1.06
YCP4YCR004C TUP1P16649 713 aa8.44□□□□□ -1.06
YCP4YCR004C SEC65P29478 273 aa8.44□□□□□ -1.06
YCP4YCR004C YKL050CP35736 922 aa8.44□□□□□ -1.06
YCP4YCR004C PSY4P38193 441 aa8.44□□□□□ -1.06
YCP4YCR004C UBS1P38290 277 aa8.44□□□□□ -1.06
YCP4YCR004C SIP4P46954 829 aa8.44□□□□□ -1.06
YCP4YCR004C YNL247WP53852 767 aaKnown RBP8.44□□□□□ -1.06
YCP4YCR004C IPI3P53877 555 aa8.44□□□□□ -1.06
YCP4YCR004C SWC7Q06707 132 aa8.44□□□□□ -1.06
YCP4YCR004C PGC1Q08959 321 aa8.44□□□□□ -1.06
YCP4YCR004C GPM3Q12326 303 aa8.44□□□□□ -1.06
YCP4YCR004C SKM1Q12469 655 aa8.44□□□□□ -1.06
YCP4YCR004C PRP8P33334 2413 aaKnown RBP8.43□□□□□ -1.06
YCP4YCR004C CLC1P17891 233 aa8.43□□□□□ -1.06
YCP4YCR004C MRS6P32864 603 aaKnown RBP8.43□□□□□ -1.06
YCP4YCR004C BIT2P38346 545 aa8.43□□□□□ -1.06
YCP4YCR004C SMC2P38989 1170 aaKnown RBP8.43□□□□□ -1.06
YCP4YCR004C RRT5P43607 289 aa8.43□□□□□ -1.06
YCP4YCR004C ROK1P45818 564 aaPredicted RBP8.43□□□□□ -1.06
YCP4YCR004C YNL143CP53908 130 aa8.43□□□□□ -1.06
YCP4YCR004C YNL040WP53960 456 aaPredicted RBP8.43□□□□□ -1.06
YCP4YCR004C YDR131CQ03899 556 aa8.43□□□□□ -1.06
YCP4YCR004C ARG7Q04728 441 aa8.43□□□□□ -1.06
YCP4YCR004C YLR287CQ05881 355 aa8.43□□□□□ -1.06
YCP4YCR004C GCN1P33892 2672 aaKnown RBP8.42□□□□□ -1.06
YCP4YCR004C RBK1P25332 333 aa8.42□□□□□ -1.06
YCP4YCR004C SAP30P38429 201 aa8.42□□□□□ -1.06
YCP4YCR004C SRP72P38688 640 aaKnown RBP8.42□□□□□ -1.06
YCP4YCR004C KHA1P40309 873 aa8.42□□□□□ -1.06
YCP4YCR004C NUP85P46673 744 aa8.42□□□□□ -1.06
YCP4YCR004C CTK3P46963 296 aaPredicted RBP8.42□□□□□ -1.06
YCP4YCR004C SWC4P53201 476 aa8.42□□□□□ -1.06
YCP4YCR004C NRD1P53617 575 aaKnown RBP RIP-Chip data8.42□□□□□ -1.06not detected
YCP4YCR004C BNI4P53858 892 aa8.42□□□□□ -1.06
YCP4YCR004C VPS9P54787 451 aa8.42□□□□□ -1.06
YCP4YCR004C REG1Q00816 1014 aa8.42□□□□□ -1.06
YCP4YCR004C TPO1Q07824 586 aa8.42□□□□□ -1.06
YCP4YCR004C CMS1Q07897 291 aaKnown RBP8.42□□□□□ -1.06
YCP4YCR004C IZH4Q99393 312 aa8.42□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 35.8 ms