RNA–Protein interactions for RNA: YBR165W

UBS1, Transcript of Ubiquitin-conjugating enzyme suppressor that regulates Cdc34p, yeast

Gene UBS1, Length 834 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBS1	YBR165W	CIR1	P42940	261 aa		5.28	□□□□□ -1.56
UBS1	YBR165W	GAT1	P43574	510 aa		5.28	□□□□□ -1.56
UBS1	YBR165W	CEG1	Q01159	459 aa	Predicted RBP	5.28	□□□□□ -1.56
UBS1	YBR165W	ACS1	Q01574	713 aa		5.28	□□□□□ -1.56
UBS1	YBR165W	UBP16	Q02863	499 aa		5.28	□□□□□ -1.56
UBS1	YBR165W	AAD4	Q07747	329 aa		5.28	□□□□□ -1.56
UBS1	YBR165W	RGT2	Q12300	763 aa		5.28	□□□□□ -1.56
UBS1	YBR165W	PNO1	Q99216	274 aa	Known RBP	5.28	□□□□□ -1.56
UBS1	YBR165W	URE2	P23202	354 aa	Known RBP	5.27	□□□□□ -1.57
UBS1	YBR165W	RRP43	P25359	394 aa	Predicted RBP	5.27	□□□□□ -1.57
UBS1	YBR165W	KES1	P35844	434 aa	Known RBP	5.27	□□□□□ -1.57
UBS1	YBR165W	ARO9	P38840	513 aa	Predicted RBP	5.27	□□□□□ -1.57
UBS1	YBR165W	MTG2	P38860	518 aa		5.27	□□□□□ -1.57
UBS1	YBR165W	TPO3	Q06451	622 aa		5.27	□□□□□ -1.57
UBS1	YBR165W	YDL242W	Q07746	117 aa		5.27	□□□□□ -1.57
UBS1	YBR165W	ARP7	Q12406	477 aa		5.27	□□□□□ -1.57
UBS1	YBR165W	CET1	O13297	549 aa	Predicted RBP	5.26	□□□□□ -1.57
UBS1	YBR165W	CTT1	P06115	562 aa		5.26	□□□□□ -1.57
UBS1	YBR165W	PEX8	P53248	589 aa		5.26	□□□□□ -1.57
UBS1	YBR165W	YER175W-A	Q8TGU4	54 aa		5.26	□□□□□ -1.57
UBS1	YBR165W	LNP1	P38878	278 aa		5.25	□□□□□ -1.57
UBS1	YBR165W	ARB1	P40024	610 aa	Known RBP	5.25	□□□□□ -1.57
UBS1	YBR165W	NOP2	P40991	618 aa	Known RBP	5.25	□□□□□ -1.57
UBS1	YBR165W	VPS64	Q03944	604 aa		5.25	□□□□□ -1.57
UBS1	YBR165W	SND1	Q04007	877 aa		5.25	□□□□□ -1.57
UBS1	YBR165W	PLM2	Q04383	521 aa		5.25	□□□□□ -1.57
UBS1	YBR165W	AIM6	Q07716	390 aa		5.25	□□□□□ -1.57
UBS1	YBR165W	NIC96	P34077	839 aa		5.24	□□□□□ -1.57
UBS1	YBR165W	FTH1	P38310	465 aa		5.24	□□□□□ -1.57
UBS1	YBR165W	YPL071C	Q02864	156 aa		5.24	□□□□□ -1.57
UBS1	YBR165W	CRF1	Q04930	467 aa		5.24	□□□□□ -1.57
UBS1	YBR165W	RAD34	Q06665	692 aa		5.24	□□□□□ -1.57
UBS1	YBR165W	RPS7A	P26786	190 aa	Known RBP	5.23	□□□□□ -1.57
UBS1	YBR165W	FRD1	P32614	470 aa	Known RBP	5.23	□□□□□ -1.57
UBS1	YBR165W	IMD2	P38697	523 aa	Known RBP	5.23	□□□□□ -1.57
UBS1	YBR165W	SAP1	P39955	897 aa	Known RBP	5.23	□□□□□ -1.57
UBS1	YBR165W	IRC7	P43623	340 aa		5.23	□□□□□ -1.57
UBS1	YBR165W	IMD3	P50095	523 aa	Known RBP	5.23	□□□□□ -1.57
UBS1	YBR165W	GEP3	Q08622	556 aa		5.23	□□□□□ -1.57
UBS1	YBR165W	YPL191C	Q08930	360 aa		5.23	□□□□□ -1.57
UBS1	YBR165W	CRC1	Q12289	327 aa		5.23	□□□□□ -1.57
UBS1	YBR165W	TMA7	Q3E764	64 aa	Known RBP	5.23	□□□□□ -1.57
UBS1	YBR165W	SES1	P07284	462 aa	Known RBP	5.22	□□□□□ -1.57
UBS1	YBR165W	YMR085W	P0CF18	432 aa		5.22	□□□□□ -1.57
UBS1	YBR165W	CIN1	P40987	1014 aa		5.22	□□□□□ -1.57
UBS1	YBR165W	LYS21	Q12122	440 aa	Known RBP	5.22	□□□□□ -1.57
UBS1	YBR165W	YBR255C-A	Q3E776	120 aa		5.22	□□□□□ -1.57
UBS1	YBR165W	MPD2	Q99316	277 aa		5.22	□□□□□ -1.57
UBS1	YBR165W	MNT3	P40549	630 aa		5.21	□□□□□ -1.58
UBS1	YBR165W	ESF2	P53743	316 aa	Known RBP	5.21	□□□□□ -1.58
UBS1	YBR165W	MPS1	P54199	764 aa		5.21	□□□□□ -1.58
UBS1	YBR165W	YAT1	P80235	687 aa		5.21	□□□□□ -1.58
UBS1	YBR165W	YML053C	Q04978	212 aa		5.21	□□□□□ -1.58
UBS1	YBR165W	RTC1	Q08281	1341 aa		5.21	□□□□□ -1.58
UBS1	YBR165W	YAP1	P19880	650 aa	Known RBP	5.2	□□□□□ -1.58
UBS1	YBR165W	TOM20	P35180	183 aa		5.2	□□□□□ -1.58
UBS1	YBR165W	VBA2	P38358	474 aa	Known RBP	5.2	□□□□□ -1.58
UBS1	YBR165W	STT3	P39007	718 aa	Known RBP	5.2	□□□□□ -1.58
UBS1	YBR165W	CFD1	P40558	293 aa		5.2	□□□□□ -1.58
UBS1	YBR165W	MAD3	P47074	515 aa		5.2	□□□□□ -1.58
UBS1	YBR165W	YPL068C	Q02749	293 aa		5.2	□□□□□ -1.58
UBS1	YBR165W	EIS1	Q05050	843 aa	Known RBP	5.2	□□□□□ -1.58
UBS1	YBR165W	CIR2	Q08822	631 aa		5.2	□□□□□ -1.58
UBS1	YBR165W	YOL114C	Q12322	202 aa		5.2	□□□□□ -1.58
UBS1	YBR165W	SST2	P11972	698 aa	Known RBP	5.19	□□□□□ -1.58
UBS1	YBR165W	SIR1	P21691	654 aa		5.19	□□□□□ -1.58
UBS1	YBR165W	SPC97	P38863	823 aa		5.19	□□□□□ -1.58
UBS1	YBR165W	JHD1	P40034	492 aa		5.19	□□□□□ -1.58
UBS1	YBR165W	SNU56	Q03782	492 aa	Known RBP	5.19	□□□□□ -1.58
UBS1	YBR165W	PDE1	P22434	369 aa		5.18	□□□□□ -1.58
UBS1	YBR165W	COQ3	P27680	312 aa		5.18	□□□□□ -1.58
UBS1	YBR165W	RPF2	P36160	344 aa	Known RBP	5.18	□□□□□ -1.58
UBS1	YBR165W	ERC1	P38767	581 aa		5.18	□□□□□ -1.58
UBS1	YBR165W	PCI8	P40512	444 aa		5.18	□□□□□ -1.58
UBS1	YBR165W	YIL024C	P40543	189 aa		5.18	□□□□□ -1.58
UBS1	YBR165W	COP1	P53622	1201 aa	Known RBP	5.18	□□□□□ -1.58
UBS1	YBR165W	TEP1	P53916	434 aa		5.18	□□□□□ -1.58
UBS1	YBR165W	AAT1	Q01802	451 aa		5.18	□□□□□ -1.58
UBS1	YBR165W	YER190C-B	P0CX94	160 aa		5.17	□□□□□ -1.58
UBS1	YBR165W	YEL077W-A	P0CX95	160 aa		5.17	□□□□□ -1.58
UBS1	YBR165W	YGR296C-B	P0CX96	160 aa		5.17	□□□□□ -1.58
UBS1	YBR165W	YPL283W-B	P0CX97	160 aa		5.17	□□□□□ -1.58
UBS1	YBR165W	YPR204C-A	P0CX98	160 aa		5.17	□□□□□ -1.58
UBS1	YBR165W	YKL133C	P36066	463 aa		5.17	□□□□□ -1.58
UBS1	YBR165W	MET14	Q02196	202 aa		5.17	□□□□□ -1.58
UBS1	YBR165W	ARA2	Q04212	335 aa		5.17	□□□□□ -1.58
UBS1	YBR165W	BRE1	Q07457	700 aa	Known RBP	5.17	□□□□□ -1.58
UBS1	YBR165W	ICL2	Q12031	575 aa		5.17	□□□□□ -1.58
UBS1	YBR165W	ILS1	P09436	1072 aa	Known RBP	5.16	□□□□□ -1.58
UBS1	YBR165W	SWC3	P31376	625 aa		5.16	□□□□□ -1.58
UBS1	YBR165W	GSH1	P32477	678 aa		5.16	□□□□□ -1.58
UBS1	YBR165W	ASK1	P35734	292 aa		5.16	□□□□□ -1.58
UBS1	YBR165W	ERV46	P39727	415 aa		5.16	□□□□□ -1.58
UBS1	YBR165W	GET3	Q12154	354 aa	Known RBP	5.16	□□□□□ -1.58
UBS1	YBR165W	YPR089W	O13585	888 aa		5.15	□□□□□ -1.59
UBS1	YBR165W	YPT1	P01123	206 aa	Known RBP	5.15	□□□□□ -1.59
UBS1	YBR165W	GAL1	P04385	528 aa		5.15	□□□□□ -1.59
UBS1	YBR165W	SIP1	P32578	815 aa		5.15	□□□□□ -1.59
UBS1	YBR165W	UBP7	P40453	1071 aa		5.15	□□□□□ -1.59
UBS1	YBR165W	QRI7	P43122	407 aa		5.15	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms