RNA–Protein interactions for RNA: YBR160W

CDC28, Transcript of Cyclin-dependent kinase (CDK) catalytic subunit, yeastyeast

Gene CDC28, Length 897 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC28YBR160W RRT2P38332 387 aa5.1□□□□□ -1.59
CDC28YBR160W MSG5P38590 489 aa5.1□□□□□ -1.59
CDC28YBR160W RFC3P38629 340 aa5.1□□□□□ -1.59
CDC28YBR160W ALG5P40350 334 aa5.1□□□□□ -1.59
CDC28YBR160W ALR2P43553 858 aa5.1□□□□□ -1.59
CDC28YBR160W MRPL22P53881 309 aa5.1□□□□□ -1.59
CDC28YBR160W ATG16Q03818 150 aa5.1□□□□□ -1.59
CDC28YBR160W HMO1Q03973 246 aaKnown RBP5.1□□□□□ -1.59
CDC28YBR160W ORM2Q06144 216 aa5.1□□□□□ -1.59
CDC28YBR160W SKG3Q06315 1026 aa5.1□□□□□ -1.59
CDC28YBR160W YLH47Q06493 454 aa5.1□□□□□ -1.59
CDC28YBR160W IRC3Q06683 689 aa5.1□□□□□ -1.59
CDC28YBR160W YDL057WQ07379 328 aa5.1□□□□□ -1.59
CDC28YBR160W RLP24Q07915 199 aaKnown RBP5.1□□□□□ -1.59
CDC28YBR160W MEU1Q07938 337 aaKnown RBP RIP-Chip data5.1□□□□□ -1.59not detected
CDC28YBR160W YPL277CQ08989 487 aa5.1□□□□□ -1.59
CDC28YBR160W YPT6Q99260 215 aa5.1□□□□□ -1.59
CDC28YBR160W ADE3P07245 946 aaKnown RBP5.09□□□□□ -1.59
CDC28YBR160W ERR1P0CX10 437 aa5.09□□□□□ -1.59
CDC28YBR160W ERR2P0CX11 437 aa5.09□□□□□ -1.59
CDC28YBR160W MRPL25P23369 157 aa5.09□□□□□ -1.59
CDC28YBR160W SPS22P25380 463 aa5.09□□□□□ -1.59
CDC28YBR160W VPH2P32341 215 aa5.09□□□□□ -1.59
CDC28YBR160W SFP1P32432 683 aa5.09□□□□□ -1.59
CDC28YBR160W EFB1P32471 206 aaKnown RBP5.09□□□□□ -1.59
CDC28YBR160W FRD1P32614 470 aaKnown RBP5.09□□□□□ -1.59
CDC28YBR160W LHS1P36016 881 aa5.09□□□□□ -1.59
CDC28YBR160W VHC1P38329 1120 aa5.09□□□□□ -1.59
CDC28YBR160W TDA11P38854 504 aa5.09□□□□□ -1.59
CDC28YBR160W SCS2P40075 244 aaKnown RBP5.09□□□□□ -1.59
CDC28YBR160W DAS1P47005 663 aa5.09□□□□□ -1.59
CDC28YBR160W FOL2P51601 243 aaKnown RBP5.09□□□□□ -1.59
CDC28YBR160W ZIP2P53061 704 aa5.09□□□□□ -1.59
CDC28YBR160W TPO2P53283 614 aa5.09□□□□□ -1.59
CDC28YBR160W LSC1P53598 329 aaKnown RBP5.09□□□□□ -1.59
CDC28YBR160W NOP15P53927 220 aaPredicted RBP5.09□□□□□ -1.59
CDC28YBR160W LGE1Q02796 332 aaKnown RBP5.09□□□□□ -1.59
CDC28YBR160W ATP25Q03153 612 aa5.09□□□□□ -1.59
CDC28YBR160W FMN1Q03778 218 aa5.09□□□□□ -1.59
CDC28YBR160W ARO80Q04052 950 aa5.09□□□□□ -1.59
CDC28YBR160W AIM33Q04516 312 aa5.09□□□□□ -1.59
CDC28YBR160W CUR1Q06469 252 aa5.09□□□□□ -1.59
CDC28YBR160W RSB1Q08417 382 aa5.09□□□□□ -1.59
CDC28YBR160W KEL3Q08979 651 aaPredicted RBP5.09□□□□□ -1.59
CDC28YBR160W TAF3Q12297 353 aa5.09□□□□□ -1.59
CDC28YBR160W BI4P03879 638 aa5.08□□□□□ -1.6
CDC28YBR160W RPL8AP17076 256 aaKnown RBP5.08□□□□□ -1.6
CDC28YBR160W SRM1P21827 482 aa5.08□□□□□ -1.6
CDC28YBR160W PRE8P23639 250 aa5.08□□□□□ -1.6
CDC28YBR160W CBF2P32504 956 aa5.08□□□□□ -1.6
CDC28YBR160W THI80P35202 319 aa5.08□□□□□ -1.6
CDC28YBR160W ECM4P36156 370 aa5.08□□□□□ -1.6
CDC28YBR160W SPC97P38863 823 aa5.08□□□□□ -1.6
CDC28YBR160W PMC1P38929 1173 aaPredicted RBP5.08□□□□□ -1.6
CDC28YBR160W GEM1P39722 662 aa5.08□□□□□ -1.6
CDC28YBR160W PFD1P46988 109 aa5.08□□□□□ -1.6
CDC28YBR160W SHE10P53075 577 aa5.08□□□□□ -1.6
CDC28YBR160W MCM6P53091 1017 aaKnown RBP5.08□□□□□ -1.6
CDC28YBR160W UTP8P53276 713 aaKnown RBP5.08□□□□□ -1.6
CDC28YBR160W COS6P53344 381 aa5.08□□□□□ -1.6
CDC28YBR160W SNO2P53823 222 aa5.08□□□□□ -1.6
CDC28YBR160W ASI1P54074 624 aa5.08□□□□□ -1.6
CDC28YBR160W YDR132CQ03900 495 aa5.08□□□□□ -1.6
CDC28YBR160W SIZ1Q04195 904 aa5.08□□□□□ -1.6
CDC28YBR160W YMR027WQ04371 470 aa5.08□□□□□ -1.6
CDC28YBR160W UBX5Q06682 500 aa5.08□□□□□ -1.6
CDC28YBR160W GET4Q12125 312 aa5.08□□□□□ -1.6
CDC28YBR160W BUG1Q12191 341 aa5.08□□□□□ -1.6
CDC28YBR160W NKP1Q12493 238 aa5.08□□□□□ -1.6
CDC28YBR160W FKS1P38631 1876 aaKnown RBP5.07□□□□□ -1.6
CDC28YBR160W THS1P04801 734 aaKnown RBP5.07□□□□□ -1.6
CDC28YBR160W SWI6P09959 803 aa5.07□□□□□ -1.6
CDC28YBR160W CBF1P17106 351 aa5.07□□□□□ -1.6
CDC28YBR160W PRP6P19735 899 aaPredicted RBP5.07□□□□□ -1.6
CDC28YBR160W URA4P20051 364 aa5.07□□□□□ -1.6
CDC28YBR160W ACE2P21192 770 aa5.07□□□□□ -1.6
CDC28YBR160W CHS3P29465 1165 aa5.07□□□□□ -1.6
CDC28YBR160W RAD16P31244 790 aa5.07□□□□□ -1.6
CDC28YBR160W DBF4P32325 704 aa5.07□□□□□ -1.6
CDC28YBR160W COY1P34237 679 aa5.07□□□□□ -1.6
CDC28YBR160W YKL151CP36059 337 aa5.07□□□□□ -1.6
CDC28YBR160W YKL023WP36103 277 aaKnown RBP5.07□□□□□ -1.6
CDC28YBR160W MBP1P39678 833 aa5.07□□□□□ -1.6
CDC28YBR160W SEC27P41811 889 aaKnown RBP5.07□□□□□ -1.6
CDC28YBR160W FMP33P46998 180 aa5.07□□□□□ -1.6
CDC28YBR160W LIA1P47120 325 aaKnown RBP5.07□□□□□ -1.6
CDC28YBR160W MIG2P53035 382 aa5.07□□□□□ -1.6
CDC28YBR160W YGR111WP53265 400 aa5.07□□□□□ -1.6
CDC28YBR160W PGA2P53903 129 aa5.07□□□□□ -1.6
CDC28YBR160W DAK1P54838 584 aaKnown RBP5.07□□□□□ -1.6
CDC28YBR160W PPM1Q04081 328 aa5.07□□□□□ -1.6
CDC28YBR160W ATG17Q06410 417 aa5.07□□□□□ -1.6
CDC28YBR160W VHS3Q08438 674 aa5.07□□□□□ -1.6
CDC28YBR160W SVS1Q12254 260 aa5.07□□□□□ -1.6
CDC28YBR160W TRM11Q12463 433 aa5.07□□□□□ -1.6
CDC28YBR160W PMS1P14242 873 aa5.06□□□□□ -1.6
CDC28YBR160W EXO70P19658 623 aa5.06□□□□□ -1.6
CDC28YBR160W KAR4P25583 335 aa5.06□□□□□ -1.6
CDC28YBR160W AST1P35183 429 aa5.06□□□□□ -1.6
CDC28YBR160W SRL3P36167 246 aa5.06□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms