RNA–Protein interactions for RNA: YBL039C

URA7, Transcript of Major CTP synthase isozyme (see also URA8), yeast

Gene URA7, Length 1,740 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
URA7	YBL039C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	5.71	□□□□□ -1.49	not detected
URA7	YBL039C	APL1	P27351	700 aa		5.71	□□□□□ -1.49
URA7	YBL039C	YEL057C	P39983	233 aa		5.71	□□□□□ -1.49
URA7	YBL039C	RGI2	P40188	164 aa		5.71	□□□□□ -1.49
URA7	YBL039C	SDP1	P40479	209 aa		5.71	□□□□□ -1.49
URA7	YBL039C	ZIM17	P42844	174 aa		5.71	□□□□□ -1.49
URA7	YBL039C	RSF1	Q05043	376 aa		5.71	□□□□□ -1.49
URA7	YBL039C	SKG3	Q06315	1026 aa		5.71	□□□□□ -1.49
URA7	YBL039C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	5.71	□□□□□ -1.49	not detected
URA7	YBL039C	APL4	Q12028	832 aa		5.71	□□□□□ -1.49
URA7	YBL039C	RIM20	Q12033	661 aa		5.71	□□□□□ -1.49
URA7	YBL039C	YVC1	Q12324	675 aa		5.71	□□□□□ -1.49
URA7	YBL039C	TY1A-NL1	Q12391	440 aa	Known RBP	5.71	□□□□□ -1.49
URA7	YBL039C	CEX1	Q12453	761 aa		5.71	□□□□□ -1.49
URA7	YBL039C	ATP2	P00830	511 aa	Known RBP	5.71	□□□□□ -1.5
URA7	YBL039C	PRP45	P28004	379 aa	Predicted RBP	5.71	□□□□□ -1.5
URA7	YBL039C	SMI1	P32566	505 aa		5.71	□□□□□ -1.5
URA7	YBL039C	UBP11	P36026	717 aa		5.71	□□□□□ -1.5
URA7	YBL039C	LAS1	P36146	502 aa	Predicted RBP	5.71	□□□□□ -1.5
URA7	YBL039C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	5.71	□□□□□ -1.5	not detected
URA7	YBL039C	PFA3	P42836	336 aa		5.71	□□□□□ -1.5
URA7	YBL039C	ZAP1	P47043	880 aa		5.71	□□□□□ -1.5
URA7	YBL039C	PRP31	P49704	494 aa	Predicted RBP	5.71	□□□□□ -1.5
URA7	YBL039C	GLO1	P50107	326 aa		5.71	□□□□□ -1.5
URA7	YBL039C	HST1	P53685	503 aa		5.71	□□□□□ -1.5
URA7	YBL039C	ARG5,6	Q01217	863 aa		5.71	□□□□□ -1.5
URA7	YBL039C	DPB4	Q04603	196 aa	Known RBP	5.71	□□□□□ -1.5
URA7	YBL039C	MCM21	Q06675	368 aa		5.71	□□□□□ -1.5
URA7	YBL039C	VPS36	Q06696	566 aa		5.71	□□□□□ -1.5
URA7	YBL039C	AIM6	Q07716	390 aa		5.71	□□□□□ -1.5
URA7	YBL039C	LYS21	Q12122	440 aa	Known RBP	5.71	□□□□□ -1.5
URA7	YBL039C	PHM7	Q12252	991 aa		5.71	□□□□□ -1.5
URA7	YBL039C	CTT1	P06115	562 aa		5.7	□□□□□ -1.5
URA7	YBL039C	ERG8	P24521	451 aa		5.7	□□□□□ -1.5
URA7	YBL039C	SED4	P25365	1065 aa		5.7	□□□□□ -1.5
URA7	YBL039C	SPB1	P25582	841 aa	Predicted RBP	5.7	□□□□□ -1.5
URA7	YBL039C	POT1	P27796	417 aa	Known RBP RIP-Chip data	5.7	□□□□□ -1.5	not detected
URA7	YBL039C	SWC3	P31376	625 aa		5.7	□□□□□ -1.5
URA7	YBL039C	ATG19	P35193	415 aa		5.7	□□□□□ -1.5
URA7	YBL039C	UBP13	P38187	747 aa		5.7	□□□□□ -1.5
URA7	YBL039C	REG2	P38232	338 aa		5.7	□□□□□ -1.5
URA7	YBL039C	TDP1	P38319	544 aa		5.7	□□□□□ -1.5
URA7	YBL039C	RTS1	P38903	757 aa		5.7	□□□□□ -1.5
URA7	YBL039C	BIT61	P47041	543 aa		5.7	□□□□□ -1.5
URA7	YBL039C	SPO1	P53541	631 aa		5.7	□□□□□ -1.5
URA7	YBL039C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	5.7	□□□□□ -1.5	not detected
URA7	YBL039C	YPL108W	Q02872	168 aa	Predicted RBP	5.7	□□□□□ -1.5
URA7	YBL039C	MUS81	Q04149	632 aa	Predicted RBP	5.7	□□□□□ -1.5
URA7	YBL039C	SIZ1	Q04195	904 aa		5.7	□□□□□ -1.5
URA7	YBL039C	YDL073W	Q07454	984 aa		5.7	□□□□□ -1.5
URA7	YBL039C	YRF1-4	O13559	1382 aa		5.7	□□□□□ -1.5
URA7	YBL039C	KAR3	P17119	729 aa		5.69	□□□□□ -1.5
URA7	YBL039C	ADE2	P21264	571 aa	Known RBP	5.69	□□□□□ -1.5
URA7	YBL039C	YCR051W	P25631	222 aa		5.69	□□□□□ -1.5
URA7	YBL039C	RPS7A	P26786	190 aa	Known RBP	5.69	□□□□□ -1.5
URA7	YBL039C	GCD7	P32502	381 aa	Predicted RBP	5.69	□□□□□ -1.5
URA7	YBL039C	ALY1	P36117	915 aa		5.69	□□□□□ -1.5
URA7	YBL039C	APT2	P36973	181 aa		5.69	□□□□□ -1.5
URA7	YBL039C	ZRG8	P40021	1076 aa		5.69	□□□□□ -1.5
URA7	YBL039C	RTT105	P40063	208 aa		5.69	□□□□□ -1.5
URA7	YBL039C	PFK26	P40433	827 aa	Known RBP	5.69	□□□□□ -1.5
URA7	YBL039C	MET28	P40573	187 aa		5.69	□□□□□ -1.5
URA7	YBL039C	GCV2	P49095	1034 aa		5.69	□□□□□ -1.5
URA7	YBL039C	ASE1	P50275	885 aa		5.69	□□□□□ -1.5
URA7	YBL039C	BNI5	P53890	448 aa	Known RBP	5.69	□□□□□ -1.5
URA7	YBL039C	HMO1	Q03973	246 aa	Known RBP	5.69	□□□□□ -1.5
URA7	YBL039C	MLH2	Q07980	695 aa		5.69	□□□□□ -1.5
URA7	YBL039C	ERG27	Q12452	347 aa	Known RBP	5.69	□□□□□ -1.5
URA7	YBL039C	RRM3	P38766	723 aa		5.68	□□□□□ -1.5
URA7	YBL039C	SFB3	P38810	929 aa		5.68	□□□□□ -1.5
URA7	YBL039C	SEC27	P41811	889 aa	Known RBP	5.68	□□□□□ -1.5
URA7	YBL039C	CCT7	P42943	550 aa	Known RBP	5.68	□□□□□ -1.5
URA7	YBL039C	YDL183C	P48569	320 aa		5.68	□□□□□ -1.5
URA7	YBL039C	TIM11	P81449	96 aa	Predicted RBP	5.68	□□□□□ -1.5
URA7	YBL039C	GCR2	Q01722	534 aa		5.68	□□□□□ -1.5
URA7	YBL039C	ADA2	Q02336	434 aa		5.68	□□□□□ -1.5
URA7	YBL039C	NGL2	Q03264	515 aa	Known RBP	5.68	□□□□□ -1.5
URA7	YBL039C	YMR111C	Q04461	462 aa	Predicted RBP	5.68	□□□□□ -1.5
URA7	YBL039C	TMA16	Q08687	178 aa		5.68	□□□□□ -1.5
URA7	YBL039C	AIM41	Q12032	185 aa		5.68	□□□□□ -1.5
URA7	YBL039C	RIB2	Q12362	591 aa	Known RBP	5.68	□□□□□ -1.5
URA7	YBL039C	VCX1	Q99385	411 aa		5.68	□□□□□ -1.5
URA7	YBL039C	STE12	P13574	688 aa		5.68	□□□□□ -1.5
URA7	YBL039C	KIN82	P25341	720 aa		5.68	□□□□□ -1.5
URA7	YBL039C	URA7	P28274	579 aa	Known RBP	5.68	□□□□□ -1.5
URA7	YBL039C	PGM1	P33401	570 aa	Known RBP	5.68	□□□□□ -1.5
URA7	YBL039C	KTR3	P38130	404 aa	Predicted RBP	5.68	□□□□□ -1.5
URA7	YBL039C	VID24	P38263	362 aa		5.68	□□□□□ -1.5
URA7	YBL039C	ARB1	P40024	610 aa	Known RBP	5.68	□□□□□ -1.5
URA7	YBL039C	CUL3	P53202	744 aa		5.68	□□□□□ -1.5
URA7	YBL039C	YGR066C	P53242	292 aa		5.68	□□□□□ -1.5
URA7	YBL039C	MUB1	Q03162	620 aa		5.68	□□□□□ -1.5
URA7	YBL039C	CLU1	Q03690	1277 aa	Known RBP	5.68	□□□□□ -1.5
URA7	YBL039C	THI22	Q06490	572 aa		5.68	□□□□□ -1.5
URA7	YBL039C	RIX7	Q07844	837 aa	Known RBP	5.68	□□□□□ -1.5
URA7	YBL039C	SPE3	Q12074	293 aa	Known RBP	5.68	□□□□□ -1.5
URA7	YBL039C	RRP36	Q12481	300 aa	Predicted RBP	5.68	□□□□□ -1.5
URA7	YBL039C	YJR112W-A	Q3E743	109 aa		5.68	□□□□□ -1.5
URA7	YBL039C	CET1	O13297	549 aa	Predicted RBP	5.67	□□□□□ -1.5
URA7	YBL039C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	5.67	□□□□□ -1.5	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms