RNA–Protein interactions for RNA: LSR1

LSR1, Transcript of U2 spliceosomal RNA (U2 snRNA), component of the spliceosome, yeastyeast

Gene LSR1, Length 1,175 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSR1LSR1 ATP2P00830 511 aaKnown RBP8.84□□□□□ -0.99
LSR1LSR1 INO1P11986 533 aa8.84□□□□□ -0.99
LSR1LSR1 SAN1P22470 610 aa8.84□□□□□ -0.99
LSR1LSR1 MSH2P25847 964 aa8.84□□□□□ -0.99
LSR1LSR1 SPR1P32603 445 aa8.84□□□□□ -0.99
LSR1LSR1 SRP101P32916 621 aa8.84□□□□□ -0.99
LSR1LSR1 UBP14P38237 781 aaKnown RBP8.84□□□□□ -0.99
LSR1LSR1 GGA2P38817 585 aaKnown RBP8.84□□□□□ -0.99
LSR1LSR1 YAT2P40017 923 aa8.84□□□□□ -0.99
LSR1LSR1 DIM1P41819 318 aaKnown RBP8.84□□□□□ -0.99
LSR1LSR1 GCN20P43535 752 aaKnown RBP8.84□□□□□ -0.99
LSR1LSR1 NUP84P52891 726 aa8.84□□□□□ -0.99
LSR1LSR1 YTP1P53584 459 aa8.84□□□□□ -0.99
LSR1LSR1 ASI1P54074 624 aa8.84□□□□□ -0.99
LSR1LSR1 YML020WQ03722 664 aa8.84□□□□□ -0.99
LSR1LSR1 INP2Q03824 705 aa8.84□□□□□ -0.99
LSR1LSR1 YET2Q04210 160 aa8.84□□□□□ -0.99
LSR1LSR1 TAF11Q04226 346 aa8.84□□□□□ -0.99
LSR1LSR1 THI20Q08224 551 aa8.84□□□□□ -0.99
LSR1LSR1 RRP36Q12481 300 aaPredicted RBP8.84□□□□□ -0.99
LSR1LSR1 RTP1Q12751 981 aa8.84□□□□□ -0.99
LSR1LSR1 URA4P20051 364 aa8.83□□□□□ -1
LSR1LSR1 MSB1P21339 1137 aaKnown RBP8.83□□□□□ -1
LSR1LSR1 MSS51P32335 436 aa8.83□□□□□ -1
LSR1LSR1 PHA2P32452 334 aa8.83□□□□□ -1
LSR1LSR1 GDA1P32621 518 aa8.83□□□□□ -1
LSR1LSR1 TBS1P38114 1094 aa8.83□□□□□ -1
LSR1LSR1 ATG12P38316 186 aa8.83□□□□□ -1
LSR1LSR1 OTU2P38747 307 aaKnown RBP8.83□□□□□ -1
LSR1LSR1 SCS2P40075 244 aaKnown RBP8.83□□□□□ -1
LSR1LSR1 RRN7P40992 514 aa8.83□□□□□ -1
LSR1LSR1 PFD1P46988 109 aa8.83□□□□□ -1
LSR1LSR1 ASN2P49090 572 aaKnown RBP8.83□□□□□ -1
LSR1LSR1 YGR127WP53275 312 aa8.83□□□□□ -1
LSR1LSR1 NOP13P53883 403 aaKnown RBP RIP-Chip data8.83□□□□□ -1not detected
LSR1LSR1 ADE12P80210 433 aaKnown RBP8.83□□□□□ -1
LSR1LSR1 MSC2Q03455 724 aa8.83□□□□□ -1
LSR1LSR1 CDC123Q05791 360 aa8.83□□□□□ -1
LSR1LSR1 BCP1Q06338 283 aa8.83□□□□□ -1
LSR1LSR1 ENT4Q07872 247 aa8.83□□□□□ -1
LSR1LSR1 TY3A-GQ12173 290 aa8.83□□□□□ -1
LSR1LSR1 ATG11Q12527 1178 aa8.83□□□□□ -1
LSR1LSR1 TY3A-IQ99219 290 aa8.83□□□□□ -1
LSR1LSR1 PAB1P04147 577 aaKnown RBP RIP-Chip data8.82□□□□□ -1not detected
LSR1LSR1 AMD2P22580 549 aa8.82□□□□□ -1
LSR1LSR1 LRE1P25579 583 aaKnown RBP8.82□□□□□ -1
LSR1LSR1 HRR25P29295 494 aaKnown RBP8.82□□□□□ -1
LSR1LSR1 RIM1P32445 135 aaKnown RBP8.82□□□□□ -1
LSR1LSR1 SMI1P32566 505 aa8.82□□□□□ -1
LSR1LSR1 BIT2P38346 545 aa8.82□□□□□ -1
LSR1LSR1 VMA10P48836 114 aaKnown RBP8.82□□□□□ -1
LSR1LSR1 PEX31P53203 462 aa8.82□□□□□ -1
LSR1LSR1 COG2P53271 262 aa8.82□□□□□ -1
LSR1LSR1 IST1P53843 298 aaPredicted RBP8.82□□□□□ -1
LSR1LSR1 VPS9P54787 451 aa8.82□□□□□ -1
LSR1LSR1 SLU7Q02775 382 aaKnown RBP8.82□□□□□ -1
LSR1LSR1 INA17Q02888 182 aa8.82□□□□□ -1
LSR1LSR1 ARP9Q05123 467 aa8.82□□□□□ -1
LSR1LSR1 FAR10Q06001 478 aa8.82□□□□□ -1
LSR1LSR1 RSC2Q06488 889 aa8.82□□□□□ -1
LSR1LSR1 ASA1Q06822 443 aa8.82□□□□□ -1
LSR1LSR1 STE2D6VTK4 431 aa8.81□□□□□ -1
LSR1LSR1 TPK1P06244 397 aa8.81□□□□□ -1
LSR1LSR1 PDC5P16467 563 aaKnown RBP8.81□□□□□ -1
LSR1LSR1 VAC17P25591 423 aa8.81□□□□□ -1
LSR1LSR1 SLA2P33338 968 aa8.81□□□□□ -1
LSR1LSR1 KDX1P36005 433 aa8.81□□□□□ -1
LSR1LSR1 MRPL7P36519 292 aa8.81□□□□□ -1
LSR1LSR1 CRP1P38845 465 aaKnown RBP8.81□□□□□ -1
LSR1LSR1 YAP1801P38856 637 aa8.81□□□□□ -1
LSR1LSR1 SEC31P38968 1273 aaKnown RBP8.81□□□□□ -1
LSR1LSR1 INP51P40559 946 aaKnown RBP8.81□□□□□ -1
LSR1LSR1 LAM5P43560 674 aa8.81□□□□□ -1
LSR1LSR1 STB4P50104 949 aa8.81□□□□□ -1
LSR1LSR1 YGR016WP53209 190 aa8.81□□□□□ -1
LSR1LSR1 JIP4Q03361 876 aa8.81□□□□□ -1
LSR1LSR1 RCL1Q08096 367 aaPredicted RBP8.81□□□□□ -1
LSR1LSR1 HOS1Q12214 470 aa8.81□□□□□ -1
LSR1LSR1 MDM20Q12387 796 aaKnown RBP8.81□□□□□ -1
LSR1LSR1 YPR089WO13585 888 aa8.8□□□□□ -1
LSR1LSR1 HSP26P15992 214 aaKnown RBP RIP-Chip data8.8□□□□□ -1not detected
LSR1LSR1 HSP60P19882 572 aaKnown RBP8.8□□□□□ -1
LSR1LSR1 YCL068CP25593 260 aa8.8□□□□□ -1
LSR1LSR1 CYS3P31373 394 aaKnown RBP8.8□□□□□ -1
LSR1LSR1 HEM12P32347 362 aaPredicted RBP8.8□□□□□ -1
LSR1LSR1 TFC1P32367 649 aa8.8□□□□□ -1
LSR1LSR1 HSP78P33416 811 aa8.8□□□□□ -1
LSR1LSR1 ASH1P34233 588 aa8.8□□□□□ -1
LSR1LSR1 YKR078WP36158 585 aaKnown RBP8.8□□□□□ -1
LSR1LSR1 YHI9P38765 294 aa8.8□□□□□ -1
LSR1LSR1 MXR1P40029 184 aa8.8□□□□□ -1
LSR1LSR1 MGS1P40151 587 aa8.8□□□□□ -1
LSR1LSR1 ATM1P40416 690 aa8.8□□□□□ -1
LSR1LSR1 YFL040WP43562 540 aa8.8□□□□□ -1
LSR1LSR1 NCS6P53088 359 aa8.8□□□□□ -1
LSR1LSR1 GND2P53319 492 aa8.8□□□□□ -1
LSR1LSR1 KTR6P54070 446 aa8.8□□□□□ -1
LSR1LSR1 PRO2P54885 456 aaKnown RBP8.8□□□□□ -1
LSR1LSR1 ULP1Q02724 621 aa8.8□□□□□ -1
LSR1LSR1 SKY1Q03656 742 aa8.8□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms