RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 SUGT1Q9Y2Z0 365 aa6.35□□□□□ -1.39
CHD2-227ENST00000637572 SNX14Q9Y5W7 946 aa6.35□□□□□ -1.39
CHD2-227ENST00000637572 DEXIO95424 95 aa6.34□□□□□ -1.39
CHD2-227ENST00000637572 GSPT1P15170 499 aaKnown RBP6.34□□□□□ -1.39
CHD2-227ENST00000637572 PODNQ7Z5L7 613 aa6.34□□□□□ -1.39
CHD2-227ENST00000637572 ERMNQ8TAM6 284 aa6.34□□□□□ -1.39
CHD2-227ENST00000637572 MS4A3Q96HJ5 214 aa6.34□□□□□ -1.39
CHD2-227ENST00000637572 PUS3Q9BZE2 481 aaKnown RBP6.34□□□□□ -1.39
CHD2-227ENST00000637572 PICK1Q9NRD5 415 aa6.34□□□□□ -1.39
CHD2-227ENST00000637572 PIM2Q9P1W9 311 aa6.34□□□□□ -1.39
CHD2-227ENST00000637572 SWAP70Q9UH65 585 aa6.34□□□□□ -1.39
CHD2-227ENST00000637572 NRXN3Q9Y4C0 1643 aa6.34□□□□□ -1.39
CHD2-227ENST00000637572 PHKA1P46020 1223 aa6.34□□□□□ -1.39
CHD2-227ENST00000637572 UBE2HP62256 183 aa6.34□□□□□ -1.39
CHD2-227ENST00000637572 CCDC183Q5T5S1 534 aa6.34□□□□□ -1.39
CHD2-227ENST00000637572 GIMAP6Q6P9H5 292 aa6.34□□□□□ -1.39
CHD2-227ENST00000637572 FERMT3Q86UX7 667 aa6.34□□□□□ -1.39
CHD2-227ENST00000637572 SIRT2Q8IXJ6 389 aa6.34□□□□□ -1.39
CHD2-227ENST00000637572 CALML4Q96GE6 196 aa6.34□□□□□ -1.39
CHD2-227ENST00000637572 SEC31BQ9NQW1 1179 aa6.34□□□□□ -1.39
CHD2-227ENST00000637572 PXDNQ92626 1479 aa6.34□□□□□ -1.4
CHD2-227ENST00000637572 MON2Q7Z3U7 1717 aa6.34□□□□□ -1.4
CHD2-227ENST00000637572 SASH1O94885 1247 aa6.34□□□□□ -1.4
CHD2-227ENST00000637572 FGFR1OPO95684 399 aaKnown RBP6.34□□□□□ -1.4
CHD2-227ENST00000637572 CSF1RP07333 972 aa6.34□□□□□ -1.4
CHD2-227ENST00000637572 NASPP49321 788 aaPredicted RBP6.34□□□□□ -1.4
CHD2-227ENST00000637572 TBC1D9BQ66K14 1250 aa6.34□□□□□ -1.4
CHD2-227ENST00000637572 SP8Q8IXZ3 490 aa6.34□□□□□ -1.4
CHD2-227ENST00000637572 IFNL3Q8IZI9 196 aa6.34□□□□□ -1.4
CHD2-227ENST00000637572 TXLNBQ8N3L3 684 aa6.34□□□□□ -1.4
CHD2-227ENST00000637572 CCDC24Q8N4L8 307 aa6.34□□□□□ -1.4
CHD2-227ENST00000637572 ZNF274Q96GC6 653 aaPredicted RBP6.34□□□□□ -1.4
CHD2-227ENST00000637572 DHX36Q9H2U1 1008 aaKnown RBP6.34□□□□□ -1.4
CHD2-227ENST00000637572 MKRN1Q9UHC7 482 aaKnown RBP6.34□□□□□ -1.4
CHD2-227ENST00000637572 GJA3Q9Y6H8 435 aa6.34□□□□□ -1.4
CHD2-227ENST00000637572 BCL9O00512 1426 aa6.33□□□□□ -1.4
CHD2-227ENST00000637572 ADD2P35612 726 aa6.33□□□□□ -1.4
CHD2-227ENST00000637572 PPARAQ07869 468 aa6.33□□□□□ -1.4
CHD2-227ENST00000637572 HSP90AA2PQ14568 343 aaPredicted RBP6.33□□□□□ -1.4
CHD2-227ENST00000637572 NFIXQ14938 502 aa6.33□□□□□ -1.4
CHD2-227ENST00000637572 MAP4K1Q92918 833 aa6.33□□□□□ -1.4
CHD2-227ENST00000637572 SMARCE1Q969G3 411 aa6.33□□□□□ -1.4
CHD2-227ENST00000637572 USP40Q9NVE5 1235 aa6.33□□□□□ -1.4
CHD2-227ENST00000637572 ANO10Q9NW15 660 aa6.33□□□□□ -1.4
CHD2-227ENST00000637572 IVNS1ABPQ9Y6Y0 642 aa6.33□□□□□ -1.4
CHD2-227ENST00000637572 CCP110O43303 1012 aa6.33□□□□□ -1.4
CHD2-227ENST00000637572 HSPD1P10809 573 aaKnown RBP6.33□□□□□ -1.4
CHD2-227ENST00000637572 APLP1P51693 650 aa6.33□□□□□ -1.4
CHD2-227ENST00000637572 NAPAP54920 295 aa6.33□□□□□ -1.4
CHD2-227ENST00000637572 PPP4R3AQ6IN85 833 aa6.33□□□□□ -1.4
CHD2-227ENST00000637572 USP48Q86UV5 1035 aa6.33□□□□□ -1.4
CHD2-227ENST00000637572 TNPO1Q92973 898 aaKnown RBP6.33□□□□□ -1.4
CHD2-227ENST00000637572 ANKRD26Q9UPS8 1709 aa6.33□□□□□ -1.4
CHD2-227ENST00000637572 PPP1R12BO60237 982 aaPredicted RBP6.33□□□□□ -1.4
CHD2-227ENST00000637572 UBA7P41226 1012 aa6.33□□□□□ -1.4
CHD2-227ENST00000637572 STXBP4Q6ZWJ1 553 aa6.33□□□□□ -1.4
CHD2-227ENST00000637572 PIBF1Q8WXW3 757 aa6.33□□□□□ -1.4
CHD2-227ENST00000637572 ZNF512BQ96KM6 892 aaPredicted RBP6.33□□□□□ -1.4
CHD2-227ENST00000637572 MTA3Q9BTC8 594 aa6.33□□□□□ -1.4
CHD2-227ENST00000637572 AS3MTQ9HBK9 375 aa6.33□□□□□ -1.4
CHD2-227ENST00000637572 RNF181Q9P0P0 153 aa6.33□□□□□ -1.4
CHD2-227ENST00000637572 KDM6AO15550 1401 aaPredicted RBP6.33□□□□□ -1.4
CHD2-227ENST00000637572 PTPDC1A2A3K4 754 aa6.33□□□□□ -1.4
CHD2-227ENST00000637572 KRT2P35908 639 aa6.33□□□□□ -1.4
CHD2-227ENST00000637572 FOXO4P98177 505 aa6.33□□□□□ -1.4
CHD2-227ENST00000637572 MICALL2Q8IY33 904 aa6.33□□□□□ -1.4
CHD2-227ENST00000637572 PLSCR2Q9NRY7 297 aa6.33□□□□□ -1.4
CHD2-227ENST00000637572 TMOD4Q9NZQ9 345 aa6.33□□□□□ -1.4
CHD2-227ENST00000637572 MINPP1Q9UNW1 487 aa6.33□□□□□ -1.4
CHD2-227ENST00000637572 USP42Q9H9J4 1324 aaKnown RBP6.32□□□□□ -1.4
CHD2-227ENST00000637572 TRIM75PA6NK02 468 aa6.32□□□□□ -1.4
CHD2-227ENST00000637572 B4E1Z4 1266 aa6.32□□□□□ -1.4
CHD2-227ENST00000637572 E7EWF7 191 aa6.32□□□□□ -1.4
CHD2-227ENST00000637572 F13A1P00488 732 aa6.32□□□□□ -1.4
CHD2-227ENST00000637572 SLC15A2Q16348 729 aa6.32□□□□□ -1.4
CHD2-227ENST00000637572 LINC00116Q8NCU8 138 aa6.32□□□□□ -1.4
CHD2-227ENST00000637572 CHD2O14647 1828 aaKnown RBP6.32□□□□□ -1.4
CHD2-227ENST00000637572 MED23Q9ULK4 1368 aa6.32□□□□□ -1.4
CHD2-227ENST00000637572 SPDYE3A6NKU9 549 aa6.32□□□□□ -1.4
CHD2-227ENST00000637572 OSBPP22059 807 aa6.32□□□□□ -1.4
CHD2-227ENST00000637572 KCNQ4P56696 695 aa6.32□□□□□ -1.4
CHD2-227ENST00000637572 APOBRQ0VD83 1088 aa6.32□□□□□ -1.4
CHD2-227ENST00000637572 RILPL1Q5EBL4 403 aa6.32□□□□□ -1.4
CHD2-227ENST00000637572 CCDC129Q6ZRS4 1044 aa6.32□□□□□ -1.4
CHD2-227ENST00000637572 TGFBRAP1Q8WUH2 860 aa6.32□□□□□ -1.4
CHD2-227ENST00000637572 ZSWIM6Q9HCJ5 1215 aa6.32□□□□□ -1.4
CHD2-227ENST00000637572 VAT1LQ9HCJ6 419 aa6.32□□□□□ -1.4
CHD2-227ENST00000637572 GOPCQ9HD26 462 aa6.32□□□□□ -1.4
CHD2-227ENST00000637572 LUC7LQ9NQ29 371 aaKnown RBP6.32□□□□□ -1.4
CHD2-227ENST00000637572 A0A0D9SFI3 127 aa6.32□□□□□ -1.4
CHD2-227ENST00000637572 USP17L3A6NCW0 530 aa6.32□□□□□ -1.4
CHD2-227ENST00000637572 USP17L4A6NCW7 530 aa6.32□□□□□ -1.4
CHD2-227ENST00000637572 PLSCR1O15162 318 aa6.32□□□□□ -1.4
CHD2-227ENST00000637572 ADORA1P30542 326 aa6.32□□□□□ -1.4
CHD2-227ENST00000637572 BTDP43251 543 aa6.32□□□□□ -1.4
CHD2-227ENST00000637572 USP17L1Q7RTZ2 530 aa6.32□□□□□ -1.4
CHD2-227ENST00000637572 HEATR3Q7Z4Q2 680 aa6.32□□□□□ -1.4
CHD2-227ENST00000637572 HOMER1Q86YM7 354 aa6.32□□□□□ -1.4
CHD2-227ENST00000637572 CCDC144CPQ8IYA2 1237 aa6.32□□□□□ -1.4
CHD2-227ENST00000637572 NECAB1Q8N987 351 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms