RNA–Protein interactions for RNA: ENST00000519207.5

SH2D4A-204, Transcript of SH2 domain containing 4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SH2D4A, Length 1,984 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-204ENST00000519207 APPP05067 770 aa11.63□□□□□ -0.55
SH2D4A-204ENST00000519207 METAP2P50579 478 aaKnown RBP eCLIP11.63□□□□□ -0.55
SH2D4A-204ENST00000519207 EIF5P55010 431 aaKnown RBP11.63□□□□□ -0.55
SH2D4A-204ENST00000519207 KIF23Q02241 960 aaPredicted RBP11.63□□□□□ -0.55
SH2D4A-204ENST00000519207 CCDC93Q567U6 631 aa11.63□□□□□ -0.55
SH2D4A-204ENST00000519207 OTUD7BQ6GQQ9 843 aa11.63□□□□□ -0.55
SH2D4A-204ENST00000519207 SMIM5Q71RC9 77 aa11.63□□□□□ -0.55
SH2D4A-204ENST00000519207 TXLNBQ8N3L3 684 aa11.63□□□□□ -0.55
SH2D4A-204ENST00000519207 IQUBQ8NA54 791 aa11.63□□□□□ -0.55
SH2D4A-204ENST00000519207 SMARCC1Q92922 1105 aaPredicted RBP11.63□□□□□ -0.55
SH2D4A-204ENST00000519207 AIDAQ96BJ3 306 aa11.63□□□□□ -0.55
SH2D4A-204ENST00000519207 RASSF4Q9H2L5 321 aa11.63□□□□□ -0.55
SH2D4A-204ENST00000519207 CLIP2Q9UDT6 1046 aa11.63□□□□□ -0.55
SH2D4A-204ENST00000519207 CLIC4Q9Y696 253 aa11.63□□□□□ -0.55
SH2D4A-204ENST00000519207 BECN2A8MW95 431 aa11.63□□□□□ -0.55
SH2D4A-204ENST00000519207 PATL2C9JE40 543 aaKnown RBP11.63□□□□□ -0.55
SH2D4A-204ENST00000519207 SLU7O95391 586 aaKnown RBP11.63□□□□□ -0.55
SH2D4A-204ENST00000519207 POLR3DP05423 398 aaPredicted RBP11.63□□□□□ -0.55
SH2D4A-204ENST00000519207 MAP3K12Q12852 859 aa11.63□□□□□ -0.55
SH2D4A-204ENST00000519207 ELF2Q15723 593 aa11.63□□□□□ -0.55
SH2D4A-204ENST00000519207 ANO1Q5XXA6 986 aa11.63□□□□□ -0.55
SH2D4A-204ENST00000519207 APOA5Q6Q788 366 aa11.63□□□□□ -0.55
SH2D4A-204ENST00000519207 CYB5R4Q7L1T6 521 aa11.63□□□□□ -0.55
SH2D4A-204ENST00000519207 SGMS1Q86VZ5 419 aa11.63□□□□□ -0.55
SH2D4A-204ENST00000519207 DHX40Q8IX18 779 aaKnown RBP11.63□□□□□ -0.55
SH2D4A-204ENST00000519207 SPATA5Q8NB90 893 aa11.63□□□□□ -0.55
SH2D4A-204ENST00000519207 SDF4Q9BRK5 362 aa11.63□□□□□ -0.55
SH2D4A-204ENST00000519207 NRBP1Q9UHY1 535 aa11.63□□□□□ -0.55
SH2D4A-204ENST00000519207 WWC3Q9ULE0 1092 aa11.63□□□□□ -0.55
SH2D4A-204ENST00000519207 CHD4Q14839 1912 aa11.63□□□□□ -0.55
SH2D4A-204ENST00000519207 ATP8B1O43520 1251 aa11.62□□□□□ -0.55
SH2D4A-204ENST00000519207 PNMA6AP0CW24 399 aaPredicted RBP11.62□□□□□ -0.55
SH2D4A-204ENST00000519207 CMA1P23946 247 aa11.62□□□□□ -0.55
SH2D4A-204ENST00000519207 HMGB2P26583 209 aaKnown RBP11.62□□□□□ -0.55
SH2D4A-204ENST00000519207 LIFRP42702 1097 aa11.62□□□□□ -0.55
SH2D4A-204ENST00000519207 NDUFA8P51970 172 aa11.62□□□□□ -0.55
SH2D4A-204ENST00000519207 CERS3Q8IU89 383 aa11.62□□□□□ -0.55
SH2D4A-204ENST00000519207 FLAD1Q8NFF5 587 aa11.62□□□□□ -0.55
SH2D4A-204ENST00000519207 IGDCC4Q8TDY8 1250 aa11.62□□□□□ -0.55
SH2D4A-204ENST00000519207 BPIFA3Q9BQP9 254 aa11.62□□□□□ -0.55
SH2D4A-204ENST00000519207 BRMS1Q9HCU9 246 aa11.62□□□□□ -0.55
SH2D4A-204ENST00000519207 KIAA1468Q9P260 1216 aa11.62□□□□□ -0.55
SH2D4A-204ENST00000519207 RSPH14Q9UHP6 348 aa11.62□□□□□ -0.55
SH2D4A-204ENST00000519207 RTL9Q8NET4 1388 aa11.62□□□□□ -0.55
SH2D4A-204ENST00000519207 LOC102724428A0A0B4J2F2 783 aa11.61□□□□□ -0.55
SH2D4A-204ENST00000519207 A0A1B0GVL5 298 aa11.61□□□□□ -0.55
SH2D4A-204ENST00000519207 SIK1P57059 783 aa11.61□□□□□ -0.55
SH2D4A-204ENST00000519207 SLC39A14Q15043 492 aa11.61□□□□□ -0.55
SH2D4A-204ENST00000519207 TPD52L1Q16890 204 aaPredicted RBP11.61□□□□□ -0.55
SH2D4A-204ENST00000519207 PARP10Q53GL7 1025 aa11.61□□□□□ -0.55
SH2D4A-204ENST00000519207 ALG1Q9BT22 464 aa11.61□□□□□ -0.55
SH2D4A-204ENST00000519207 UTP14AQ9BVJ6 771 aaKnown RBP11.61□□□□□ -0.55
SH2D4A-204ENST00000519207 CNNM2Q9H8M5 875 aa11.61□□□□□ -0.55
SH2D4A-204ENST00000519207 TAF1LQ8IZX4 1826 aa11.61□□□□□ -0.55
SH2D4A-204ENST00000519207 B4E1Z4 1266 aa11.61□□□□□ -0.55
SH2D4A-204ENST00000519207 KIF28PB7ZC32 967 aa11.61□□□□□ -0.55
SH2D4A-204ENST00000519207 KIF2AO00139 706 aaPredicted RBP11.61□□□□□ -0.55
SH2D4A-204ENST00000519207 ZBTB43O43298 467 aa11.61□□□□□ -0.55
SH2D4A-204ENST00000519207 GNAT2P19087 354 aa11.61□□□□□ -0.55
SH2D4A-204ENST00000519207 CASQ1P31415 396 aa11.61□□□□□ -0.55
SH2D4A-204ENST00000519207 AXDND1Q5T1B0 1012 aaPredicted RBP11.61□□□□□ -0.55
SH2D4A-204ENST00000519207 ICE2Q659A1 982 aa11.61□□□□□ -0.55
SH2D4A-204ENST00000519207 MPHOSPH8Q99549 860 aa11.61□□□□□ -0.55
SH2D4A-204ENST00000519207 LY9Q9HBG7 655 aa11.61□□□□□ -0.55
SH2D4A-204ENST00000519207 CCDC87Q9NVE4 849 aa11.61□□□□□ -0.55
SH2D4A-204ENST00000519207 TIAM2Q8IVF5 1701 aa11.6□□□□□ -0.55
SH2D4A-204ENST00000519207 STK36Q9NRP7 1315 aa11.6□□□□□ -0.55
SH2D4A-204ENST00000519207 NID2Q14112 1375 aa11.6□□□□□ -0.55
SH2D4A-204ENST00000519207 MYO1CO00159 1063 aa11.6□□□□□ -0.55
SH2D4A-204ENST00000519207 PPP6R2O75170 966 aa11.6□□□□□ -0.55
SH2D4A-204ENST00000519207 ZNF202O95125 648 aa11.6□□□□□ -0.55
SH2D4A-204ENST00000519207 YBX3P16989 372 aaKnown RBP eCLIP11.6□□□□□ -0.55
SH2D4A-204ENST00000519207 CLCN6P51797 869 aa11.6□□□□□ -0.55
SH2D4A-204ENST00000519207 RASGRF1Q13972 1273 aa11.6□□□□□ -0.55
SH2D4A-204ENST00000519207 ZRSR1Q15695 479 aaKnown RBP11.6□□□□□ -0.55
SH2D4A-204ENST00000519207 NTRK3Q16288 839 aa11.6□□□□□ -0.55
SH2D4A-204ENST00000519207 CCDC144BQ3MJ40 725 aa11.6□□□□□ -0.55
SH2D4A-204ENST00000519207 CCDC152Q4G0S7 254 aa11.6□□□□□ -0.55
SH2D4A-204ENST00000519207 SUSD4Q5VX71 490 aa11.6□□□□□ -0.55
SH2D4A-204ENST00000519207 INTS5Q6P9B9 1019 aaKnown RBP11.6□□□□□ -0.55
SH2D4A-204ENST00000519207 LRRC8AQ8IWT6 810 aa11.6□□□□□ -0.55
SH2D4A-204ENST00000519207 CCDC144CPQ8IYA2 1237 aa11.6□□□□□ -0.55
SH2D4A-204ENST00000519207 IFNL3Q8IZI9 196 aa11.6□□□□□ -0.55
SH2D4A-204ENST00000519207 JMYQ8N9B5 988 aa11.6□□□□□ -0.55
SH2D4A-204ENST00000519207 LINC00116Q8NCU8 138 aa11.6□□□□□ -0.55
SH2D4A-204ENST00000519207 MTA3Q9BTC8 594 aa11.6□□□□□ -0.55
SH2D4A-204ENST00000519207 KRT23Q9C075 422 aa11.6□□□□□ -0.55
SH2D4A-204ENST00000519207 NAPBQ9H115 298 aa11.6□□□□□ -0.55
SH2D4A-204ENST00000519207 PSD3Q9NYI0 1048 aa11.6□□□□□ -0.55
SH2D4A-204ENST00000519207 DENND2AQ9ULE3 1009 aa11.6□□□□□ -0.55
SH2D4A-204ENST00000519207 NEDD4P46934 1319 aa11.6□□□□□ -0.55
SH2D4A-204ENST00000519207 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.59□□□□□ -0.55
SH2D4A-204ENST00000519207 USP27XA6NNY8 438 aa11.59□□□□□ -0.55
SH2D4A-204ENST00000519207 ITPK1Q13572 414 aa11.59□□□□□ -0.55
SH2D4A-204ENST00000519207 TMEM67Q5HYA8 995 aa11.59□□□□□ -0.55
SH2D4A-204ENST00000519207 KRT40Q6A162 431 aa11.59□□□□□ -0.55
SH2D4A-204ENST00000519207 SYT10Q6XYQ8 523 aa11.59□□□□□ -0.55
SH2D4A-204ENST00000519207 VPS37DQ86XT2 251 aa11.59□□□□□ -0.55
SH2D4A-204ENST00000519207 RAB11FIP4Q86YS3 637 aa11.59□□□□□ -0.55
SH2D4A-204ENST00000519207 MAGEB6Q8N7X4 407 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms