RNA–Protein interactions for RNA: ENST00000471439.1

VPS13A-210, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-210ENST00000471439 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.72□□□□□ -1.33
VPS13A-210ENST00000471439 AGLP35573 1532 aa6.72□□□□□ -1.33
VPS13A-210ENST00000471439 MED26O95402 600 aa6.72□□□□□ -1.33
VPS13A-210ENST00000471439 CYP11A1P05108 521 aa6.72□□□□□ -1.33
VPS13A-210ENST00000471439 SSTR4P31391 388 aa6.72□□□□□ -1.33
VPS13A-210ENST00000471439 PDE3AQ14432 1141 aa6.72□□□□□ -1.33
VPS13A-210ENST00000471439 ZDHHC13Q8IUH4 622 aa6.72□□□□□ -1.33
VPS13A-210ENST00000471439 ZSCAN29Q8IWY8 852 aaPredicted RBP6.72□□□□□ -1.33
VPS13A-210ENST00000471439 MFSD14AQ96MC6 490 aa6.72□□□□□ -1.33
VPS13A-210ENST00000471439 WDR18Q9BV38 432 aa6.72□□□□□ -1.33
VPS13A-210ENST00000471439 FAM105AQ9NUU6 356 aa6.72□□□□□ -1.33
VPS13A-210ENST00000471439 RNF112Q9ULX5 631 aa6.72□□□□□ -1.33
VPS13A-210ENST00000471439 AP4E1Q9UPM8 1137 aa6.72□□□□□ -1.33
VPS13A-210ENST00000471439 CNTLNQ9NXG0 1405 aa6.72□□□□□ -1.33
VPS13A-210ENST00000471439 ZMYM3Q14202 1370 aa6.71□□□□□ -1.33
VPS13A-210ENST00000471439 HYAL3O43820 417 aaPredicted RBP6.71□□□□□ -1.34
VPS13A-210ENST00000471439 LIG1P18858 919 aa6.71□□□□□ -1.34
VPS13A-210ENST00000471439 RAB6AP20340 208 aa6.71□□□□□ -1.34
VPS13A-210ENST00000471439 LRP8Q14114 963 aa6.71□□□□□ -1.34
VPS13A-210ENST00000471439 RNF43Q68DV7 783 aa6.71□□□□□ -1.34
VPS13A-210ENST00000471439 TPTE2Q6XPS3 522 aa6.71□□□□□ -1.34
VPS13A-210ENST00000471439 CLEC10AQ8IUN9 316 aa6.71□□□□□ -1.34
VPS13A-210ENST00000471439 SHKBP1Q8TBC3 707 aa6.71□□□□□ -1.34
VPS13A-210ENST00000471439 FAM83CQ9BQN1 747 aa6.71□□□□□ -1.34
VPS13A-210ENST00000471439 PPP1R9AQ9ULJ8 1098 aa6.71□□□□□ -1.34
VPS13A-210ENST00000471439 SHPRHQ149N8 1683 aa6.71□□□□□ -1.34
VPS13A-210ENST00000471439 ZNF862O60290 1169 aa6.7□□□□□ -1.34
VPS13A-210ENST00000471439 AOC2O75106 756 aa6.7□□□□□ -1.34
VPS13A-210ENST00000471439 PAGE1O75459 146 aa6.7□□□□□ -1.34
VPS13A-210ENST00000471439 RPS26P11Q5JNZ5 115 aaPredicted RBP6.7□□□□□ -1.34
VPS13A-210ENST00000471439 RASIP1Q5U651 963 aa6.7□□□□□ -1.34
VPS13A-210ENST00000471439 MPRIPQ6WCQ1 1025 aa6.7□□□□□ -1.34
VPS13A-210ENST00000471439 PDZD3Q86UT5 571 aa6.7□□□□□ -1.34
VPS13A-210ENST00000471439 DBNDD2Q9BQY9 259 aa6.7□□□□□ -1.34
VPS13A-210ENST00000471439 ZFP64Q9NPA5 681 aa6.7□□□□□ -1.34
VPS13A-210ENST00000471439 HIF3AQ9Y2N7 669 aa6.7□□□□□ -1.34
VPS13A-210ENST00000471439 A2ML1A8K2U0 1454 aa6.7□□□□□ -1.34
VPS13A-210ENST00000471439 BIVM-ERCC5R4GMW8 1640 aa6.69□□□□□ -1.34
VPS13A-210ENST00000471439 NPHP4O75161 1426 aaPredicted RBP6.69□□□□□ -1.34
VPS13A-210ENST00000471439 BLMP54132 1417 aaPredicted RBP6.69□□□□□ -1.34
VPS13A-210ENST00000471439 IQGAP1P46940 1657 aa6.69□□□□□ -1.34
VPS13A-210ENST00000471439 ATP10BO94823 1461 aa6.69□□□□□ -1.34
VPS13A-210ENST00000471439 PRR19A6NJB7 356 aa6.69□□□□□ -1.34
VPS13A-210ENST00000471439 DYNC1LI2O43237 492 aaPredicted RBP6.69□□□□□ -1.34
VPS13A-210ENST00000471439 GSTP1P09211 210 aaKnown RBP6.69□□□□□ -1.34
VPS13A-210ENST00000471439 ADMP35318 185 aa6.69□□□□□ -1.34
VPS13A-210ENST00000471439 USP11P51784 963 aa6.69□□□□□ -1.34
VPS13A-210ENST00000471439 AP3B2Q13367 1082 aa6.69□□□□□ -1.34
VPS13A-210ENST00000471439 NFKBIBQ15653 356 aa6.69□□□□□ -1.34
VPS13A-210ENST00000471439 DYMQ7RTS9 669 aa6.69□□□□□ -1.34
VPS13A-210ENST00000471439 SULF2Q8IWU5 870 aa6.69□□□□□ -1.34
VPS13A-210ENST00000471439 FBXL6Q8N531 539 aa6.69□□□□□ -1.34
VPS13A-210ENST00000471439 LGR6Q9HBX8 967 aa6.69□□□□□ -1.34
VPS13A-210ENST00000471439 RAD18Q9NS91 495 aa6.69□□□□□ -1.34
VPS13A-210ENST00000471439 UGGT2Q9NYU1 1516 aa6.69□□□□□ -1.34
VPS13A-210ENST00000471439 FGD6Q6ZV73 1430 aa6.68□□□□□ -1.34
VPS13A-210ENST00000471439 SCAPERQ9BY12 1400 aa6.68□□□□□ -1.34
VPS13A-210ENST00000471439 MED14O60244 1454 aa6.68□□□□□ -1.34
VPS13A-210ENST00000471439 ANKRD33BA6NCL7 494 aa6.68□□□□□ -1.34
VPS13A-210ENST00000471439 TMPRSS2O15393 492 aa6.68□□□□□ -1.34
VPS13A-210ENST00000471439 LDHBP07195 334 aaKnown RBP6.68□□□□□ -1.34
VPS13A-210ENST00000471439 NFICP08651 508 aa6.68□□□□□ -1.34
VPS13A-210ENST00000471439 CD97P48960 835 aa6.68□□□□□ -1.34
VPS13A-210ENST00000471439 ANKLE2Q86XL3 938 aa6.68□□□□□ -1.34
VPS13A-210ENST00000471439 FBF1Q8TES7 1133 aa6.68□□□□□ -1.34
VPS13A-210ENST00000471439 ZNF428Q96B54 188 aa6.68□□□□□ -1.34
VPS13A-210ENST00000471439 SEMA6CQ9H3T2 930 aa6.68□□□□□ -1.34
VPS13A-210ENST00000471439 TMEM39AQ9NV64 488 aa6.68□□□□□ -1.34
VPS13A-210ENST00000471439 DIP2CQ9Y2E4 1556 aa6.67□□□□□ -1.34
VPS13A-210ENST00000471439 FAM95CA0A1B0GW59 222 aa6.67□□□□□ -1.34
VPS13A-210ENST00000471439 WDR64B1ANS9 1081 aa6.67□□□□□ -1.34
VPS13A-210ENST00000471439 ENC1O14682 589 aa6.67□□□□□ -1.34
VPS13A-210ENST00000471439 GSC2O15499 205 aa6.67□□□□□ -1.34
VPS13A-210ENST00000471439 F13BP05160 661 aa6.67□□□□□ -1.34
VPS13A-210ENST00000471439 CELA3AP09093 270 aa6.67□□□□□ -1.34
VPS13A-210ENST00000471439 USP17L7P0C7H9 530 aa6.67□□□□□ -1.34
VPS13A-210ENST00000471439 HOXA10P31260 410 aaPredicted RBP6.67□□□□□ -1.34
VPS13A-210ENST00000471439 R3HDM1Q15032 1099 aaKnown RBP6.67□□□□□ -1.34
VPS13A-210ENST00000471439 NPAS4Q8IUM7 802 aa6.67□□□□□ -1.34
VPS13A-210ENST00000471439 GRIN3AQ8TCU5 1115 aa6.67□□□□□ -1.34
VPS13A-210ENST00000471439 DDX54Q8TDD1 881 aaKnown RBP6.67□□□□□ -1.34
VPS13A-210ENST00000471439 KCNB2Q92953 911 aa6.67□□□□□ -1.34
VPS13A-210ENST00000471439 PCDHGC5Q9Y5F6 944 aa6.67□□□□□ -1.34
VPS13A-210ENST00000471439 ADGBQ8N7X0 1667 aa6.67□□□□□ -1.34
VPS13A-210ENST00000471439 RTEL1-TNFRSF6BF6WH68 1400 aa6.67□□□□□ -1.34
VPS13A-210ENST00000471439 SCAF11Q99590 1463 aaKnown RBP6.66□□□□□ -1.34
VPS13A-210ENST00000471439 REREQ9P2R6 1566 aa6.66□□□□□ -1.34
VPS13A-210ENST00000471439 DEPDC5O75140 1603 aa6.66□□□□□ -1.34
VPS13A-210ENST00000471439 ADAMTS4O75173 837 aa6.66□□□□□ -1.34
VPS13A-210ENST00000471439 GSTT1P30711 240 aa6.66□□□□□ -1.34
VPS13A-210ENST00000471439 ASPAP45381 313 aa6.66□□□□□ -1.34
VPS13A-210ENST00000471439 ATP2B2Q01814 1243 aa6.66□□□□□ -1.34
VPS13A-210ENST00000471439 MAP1SQ66K74 1059 aaPredicted RBP6.66□□□□□ -1.34
VPS13A-210ENST00000471439 ALG1LQ6GMV1 187 aa6.66□□□□□ -1.34
VPS13A-210ENST00000471439 EZH1Q92800 747 aaPredicted RBP6.66□□□□□ -1.34
VPS13A-210ENST00000471439 NECAB3Q96P71 396 aaPredicted RBP6.66□□□□□ -1.34
VPS13A-210ENST00000471439 GSX1Q9H4S2 264 aaPredicted RBP6.66□□□□□ -1.34
VPS13A-210ENST00000471439 ACSS3Q9H6R3 686 aa6.66□□□□□ -1.34
VPS13A-210ENST00000471439 C12orf49Q9H741 205 aa6.66□□□□□ -1.34
VPS13A-210ENST00000471439 PRKAG2Q9UGJ0 569 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms