RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 PSDA5PKW4 1024 aaPredicted RBP16.99■□□□□ 0.31
PRPF38B-204ENST00000467302 SH2B2O14492 632 aaPredicted RBP16.99■□□□□ 0.31
PRPF38B-204ENST00000467302 TPM4P67936 248 aa16.99■□□□□ 0.31
PRPF38B-204ENST00000467302 UBE4AQ14139 1066 aa16.99■□□□□ 0.31
PRPF38B-204ENST00000467302 PTPAQ15257 358 aa16.99■□□□□ 0.31
PRPF38B-204ENST00000467302 FAM196AQ6ZSG2 479 aa16.99■□□□□ 0.31
PRPF38B-204ENST00000467302 CYB5R4Q7L1T6 521 aa16.99■□□□□ 0.31
PRPF38B-204ENST00000467302 AMIGO3Q86WK7 504 aa16.99■□□□□ 0.31
PRPF38B-204ENST00000467302 MAGEB6Q8N7X4 407 aa16.99■□□□□ 0.31
PRPF38B-204ENST00000467302 AIDAQ96BJ3 306 aa16.99■□□□□ 0.31
PRPF38B-204ENST00000467302 AIFM3Q96NN9 605 aa16.99■□□□□ 0.31
PRPF38B-204ENST00000467302 ALG1Q9BT22 464 aa16.99■□□□□ 0.31
PRPF38B-204ENST00000467302 TNRC6CQ9HCJ0 1690 aaKnown RBP16.99■□□□□ 0.31
PRPF38B-204ENST00000467302 ZNF804BA4D1E1 1349 aa16.99■□□□□ 0.31
PRPF38B-204ENST00000467302 PPP6R2O75170 966 aa16.99■□□□□ 0.31
PRPF38B-204ENST00000467302 APPP05067 770 aa16.99■□□□□ 0.31
PRPF38B-204ENST00000467302 SFPQP23246 707 aaKnown RBP eCLIP16.99■□□□□ 0.31
PRPF38B-204ENST00000467302 MARCKSP29966 332 aaPredicted RBP16.99■□□□□ 0.31
PRPF38B-204ENST00000467302 TRDNQ13061 729 aa16.99■□□□□ 0.31
PRPF38B-204ENST00000467302 VPS37DQ86XT2 251 aa16.99■□□□□ 0.31
PRPF38B-204ENST00000467302 PPP1R13BQ96KQ4 1090 aa16.99■□□□□ 0.31
PRPF38B-204ENST00000467302 MINPP1Q9UNW1 487 aa16.99■□□□□ 0.31
PRPF38B-204ENST00000467302 MORC2Q9Y6X9 1032 aaPredicted RBP16.99■□□□□ 0.31
PRPF38B-204ENST00000467302 METAP2P50579 478 aaKnown RBP eCLIP16.98■□□□□ 0.31
PRPF38B-204ENST00000467302 SLC27A3Q5K4L6 730 aa16.98■□□□□ 0.31
PRPF38B-204ENST00000467302 SHC4Q6S5L8 630 aa16.98■□□□□ 0.31
PRPF38B-204ENST00000467302 STRBPQ96SI9 672 aaKnown RBP16.98■□□□□ 0.31
PRPF38B-204ENST00000467302 MAP3K14Q99558 947 aa16.98■□□□□ 0.31
PRPF38B-204ENST00000467302 L2HGDHQ9H9P8 463 aa16.98■□□□□ 0.31
PRPF38B-204ENST00000467302 GNL3LQ9NVN8 582 aaKnown RBP16.98■□□□□ 0.31
PRPF38B-204ENST00000467302 CDKL5O76039 1030 aa16.97■□□□□ 0.31
PRPF38B-204ENST00000467302 SYKP43405 635 aa16.97■□□□□ 0.31
PRPF38B-204ENST00000467302 FANCCQ00597 558 aa16.97■□□□□ 0.31
PRPF38B-204ENST00000467302 KMT5BQ4FZB7 885 aa16.97■□□□□ 0.31
PRPF38B-204ENST00000467302 KRT40Q6A162 431 aa16.97■□□□□ 0.31
PRPF38B-204ENST00000467302 APOA5Q6Q788 366 aa16.97■□□□□ 0.31
PRPF38B-204ENST00000467302 KRT27Q7Z3Y8 459 aa16.97■□□□□ 0.31
PRPF38B-204ENST00000467302 ZNF397Q8NF99 534 aaPredicted RBP16.97■□□□□ 0.31
PRPF38B-204ENST00000467302 CELF1Q92879 486 aaKnown RBP16.97■□□□□ 0.31
PRPF38B-204ENST00000467302 SLU7O95391 586 aaKnown RBP16.97■□□□□ 0.31
PRPF38B-204ENST00000467302 CDC27P30260 824 aa16.97■□□□□ 0.31
PRPF38B-204ENST00000467302 RPS8P62241 208 aaKnown RBP16.97■□□□□ 0.31
PRPF38B-204ENST00000467302 LRRC4BQ9NT99 713 aa16.97■□□□□ 0.31
PRPF38B-204ENST00000467302 NTRK3Q16288 839 aa16.96■□□□□ 0.31
PRPF38B-204ENST00000467302 CAVIN4Q5BKX8 364 aa16.96■□□□□ 0.31
PRPF38B-204ENST00000467302 RESP18Q5W5W9 173 aa16.96■□□□□ 0.31
PRPF38B-204ENST00000467302 JMYQ8N9B5 988 aa16.96■□□□□ 0.31
PRPF38B-204ENST00000467302 IGDCC4Q8TDY8 1250 aa16.96■□□□□ 0.31
PRPF38B-204ENST00000467302 SENP2Q9HC62 589 aa16.96■□□□□ 0.31
PRPF38B-204ENST00000467302 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.96■□□□□ 0.31
PRPF38B-204ENST00000467302 LRP2BPQ9P2M1 347 aa16.96■□□□□ 0.31
PRPF38B-204ENST00000467302 PATL2C9JE40 543 aaKnown RBP16.96■□□□□ 0.3
PRPF38B-204ENST00000467302 ATP1A3P13637 1013 aa16.96■□□□□ 0.3
PRPF38B-204ENST00000467302 LMOD1P29536 600 aaPredicted RBP16.96■□□□□ 0.3
PRPF38B-204ENST00000467302 GYG1P46976 350 aa16.96■□□□□ 0.3
PRPF38B-204ENST00000467302 ALX1Q15699 326 aa16.96■□□□□ 0.3
PRPF38B-204ENST00000467302 CCDC93Q567U6 631 aa16.96■□□□□ 0.3
PRPF38B-204ENST00000467302 FAM217BQ9NTX9 383 aaPredicted RBP16.96■□□□□ 0.3
PRPF38B-204ENST00000467302 NPHP1O15259 732 aa16.95■□□□□ 0.3
PRPF38B-204ENST00000467302 MBD4O95243 580 aa16.95■□□□□ 0.3
PRPF38B-204ENST00000467302 TUBB4AP04350 444 aa16.95■□□□□ 0.3
PRPF38B-204ENST00000467302 ELF2Q15723 593 aa16.95■□□□□ 0.3
PRPF38B-204ENST00000467302 SGMS1Q86VZ5 419 aa16.95■□□□□ 0.3
PRPF38B-204ENST00000467302 CCDC24Q8N4L8 307 aa16.95■□□□□ 0.3
PRPF38B-204ENST00000467302 PHKBQ93100 1093 aa16.95■□□□□ 0.3
PRPF38B-204ENST00000467302 TMEM87BQ96K49 555 aa16.95■□□□□ 0.3
PRPF38B-204ENST00000467302 ANKRD2Q9GZV1 360 aa16.95■□□□□ 0.3
PRPF38B-204ENST00000467302 FAM53CQ9NYF3 392 aa16.95■□□□□ 0.3
PRPF38B-204ENST00000467302 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.95■□□□□ 0.3
PRPF38B-204ENST00000467302 ZHX1Q9UKY1 873 aaPredicted RBP16.95■□□□□ 0.3
PRPF38B-204ENST00000467302 V9GYY5 206 aaPredicted RBP16.95■□□□□ 0.3
PRPF38B-204ENST00000467302 MYH13Q9UKX3 1938 aa16.94■□□□□ 0.3
PRPF38B-204ENST00000467302 RANBP6O60518 1105 aaKnown RBP16.94■□□□□ 0.3
PRPF38B-204ENST00000467302 KIF20AO95235 890 aa16.94■□□□□ 0.3
PRPF38B-204ENST00000467302 RXRAP19793 462 aa16.94■□□□□ 0.3
PRPF38B-204ENST00000467302 HMGB2P26583 209 aaKnown RBP16.94■□□□□ 0.3
PRPF38B-204ENST00000467302 ISM2Q6H9L7 571 aa16.94■□□□□ 0.3
PRPF38B-204ENST00000467302 CPLX2Q6PUV4 134 aaKnown RBP16.94■□□□□ 0.3
PRPF38B-204ENST00000467302 TMX1Q9H3N1 280 aa16.94■□□□□ 0.3
PRPF38B-204ENST00000467302 LY9Q9HBG7 655 aa16.94■□□□□ 0.3
PRPF38B-204ENST00000467302 IQSEC3Q9UPP2 1182 aaPredicted RBP16.94■□□□□ 0.3
PRPF38B-204ENST00000467302 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.94■□□□□ 0.3
PRPF38B-204ENST00000467302 WTIPA6NIX2 430 aaPredicted RBP16.94■□□□□ 0.3
PRPF38B-204ENST00000467302 B4E1Z4 1266 aa16.94■□□□□ 0.3
PRPF38B-204ENST00000467302 MYL5Q02045 173 aa16.94■□□□□ 0.3
PRPF38B-204ENST00000467302 NFIXQ14938 502 aa16.94■□□□□ 0.3
PRPF38B-204ENST00000467302 FBXO38Q6PIJ6 1188 aa16.94■□□□□ 0.3
PRPF38B-204ENST00000467302 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.94■□□□□ 0.3
PRPF38B-204ENST00000467302 ARMT1Q9H993 441 aa16.94■□□□□ 0.3
PRPF38B-204ENST00000467302 TIAM2Q8IVF5 1701 aa16.94■□□□□ 0.3
PRPF38B-204ENST00000467302 COL1A1P02452 1464 aaPredicted RBP16.93■□□□□ 0.3
PRPF38B-204ENST00000467302 ZBTB43O43298 467 aa16.93■□□□□ 0.3
PRPF38B-204ENST00000467302 NRDCO43847 1150 aa16.93■□□□□ 0.3
PRPF38B-204ENST00000467302 PNOCQ13519 176 aa16.93■□□□□ 0.3
PRPF38B-204ENST00000467302 METTL16Q86W50 562 aaKnown RBP16.93■□□□□ 0.3
PRPF38B-204ENST00000467302 IFNL3Q8IZI9 196 aa16.93■□□□□ 0.3
PRPF38B-204ENST00000467302 CNBD1Q8NA66 436 aa16.93■□□□□ 0.3
PRPF38B-204ENST00000467302 CLIC6Q96NY7 704 aa16.93■□□□□ 0.3
PRPF38B-204ENST00000467302 PNPLA7Q6ZV29 1317 aa16.93■□□□□ 0.3
PRPF38B-204ENST00000467302 CHD4Q14839 1912 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms