RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 RCN1Q15293 331 aa9.07□□□□□ -0.96
USP48-203ENST00000374732 C11orf74Q86VG3 221 aa9.07□□□□□ -0.96
USP48-203ENST00000374732 BACH2Q9BYV9 841 aa9.07□□□□□ -0.96
USP48-203ENST00000374732 TNMDQ9H2S6 317 aa9.07□□□□□ -0.96
USP48-203ENST00000374732 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.07□□□□□ -0.96
USP48-203ENST00000374732 MYO1CO00159 1063 aa9.07□□□□□ -0.96
USP48-203ENST00000374732 DIAPH1O60610 1272 aaKnown RBP9.07□□□□□ -0.96
USP48-203ENST00000374732 HALP42357 657 aa9.07□□□□□ -0.96
USP48-203ENST00000374732 TNNI2P48788 182 aa9.07□□□□□ -0.96
USP48-203ENST00000374732 ITIH3Q06033 890 aa9.07□□□□□ -0.96
USP48-203ENST00000374732 TTC31Q49AM3 519 aaPredicted RBP9.07□□□□□ -0.96
USP48-203ENST00000374732 PDCL2Q8N4E4 241 aa9.07□□□□□ -0.96
USP48-203ENST00000374732 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.07□□□□□ -0.96
USP48-203ENST00000374732 OSBPL10Q9BXB5 764 aa9.07□□□□□ -0.96
USP48-203ENST00000374732 LRRCC1Q9C099 1032 aa9.07□□□□□ -0.96
USP48-203ENST00000374732 TRAK1Q9UPV9 953 aa9.07□□□□□ -0.96
USP48-203ENST00000374732 TRPC6Q9Y210 931 aa9.07□□□□□ -0.96
USP48-203ENST00000374732 PHLPP1O60346 1717 aa9.07□□□□□ -0.96
USP48-203ENST00000374732 SPATA31A6Q5VVP1 1343 aa9.06□□□□□ -0.96
USP48-203ENST00000374732 LRRC10BA6NIK2 292 aa9.06□□□□□ -0.96
USP48-203ENST00000374732 EIF4BP23588 611 aaKnown RBP9.06□□□□□ -0.96
USP48-203ENST00000374732 U2AF2P26368 475 aaKnown RBP eCLIP9.06□□□□□ -0.961e-7■□□□□ 11.3
USP48-203ENST00000374732 HPDP32754 393 aaPredicted RBP9.06□□□□□ -0.96
USP48-203ENST00000374732 CDR1P51861 262 aa9.06□□□□□ -0.96
USP48-203ENST00000374732 RASA2Q15283 850 aa9.06□□□□□ -0.96
USP48-203ENST00000374732 KBTBD12Q3ZCT8 623 aa9.06□□□□□ -0.96
USP48-203ENST00000374732 INO80DQ53TQ3 878 aaPredicted RBP9.06□□□□□ -0.96
USP48-203ENST00000374732 KIAA1614Q5VZ46 1190 aa9.06□□□□□ -0.96
USP48-203ENST00000374732 BRSK2Q8IWQ3 736 aa9.06□□□□□ -0.96
USP48-203ENST00000374732 MIGA1Q8NAN2 632 aa9.06□□□□□ -0.96
USP48-203ENST00000374732 ANKK1Q8NFD2 765 aa9.06□□□□□ -0.96
USP48-203ENST00000374732 SUN5Q8TC36 379 aa9.06□□□□□ -0.96
USP48-203ENST00000374732 PPM1EQ8WY54 764 aa9.06□□□□□ -0.96
USP48-203ENST00000374732 CDK5RAP3Q96JB5 506 aa9.06□□□□□ -0.96
USP48-203ENST00000374732 HDGFP51858 240 aaKnown RBP9.06□□□□□ -0.96
USP48-203ENST00000374732 ARHGEF6Q15052 776 aa9.06□□□□□ -0.96
USP48-203ENST00000374732 CDCA2Q69YH5 1023 aaPredicted RBP9.06□□□□□ -0.96
USP48-203ENST00000374732 MAK16Q9BXY0 300 aaKnown RBP9.06□□□□□ -0.96
USP48-203ENST00000374732 C14orf93Q9H972 538 aaKnown RBP9.06□□□□□ -0.96
USP48-203ENST00000374732 ADGRF5Q8IZF2 1346 aa9.06□□□□□ -0.96
USP48-203ENST00000374732 ADGRB1O14514 1584 aa9.06□□□□□ -0.96
USP48-203ENST00000374732 CCDC173Q0VFZ6 552 aa9.05□□□□□ -0.96
USP48-203ENST00000374732 TTLL5Q6EMB2 1281 aa9.05□□□□□ -0.96
USP48-203ENST00000374732 ZNF75CPQ92670 426 aaPredicted RBP9.05□□□□□ -0.96
USP48-203ENST00000374732 POLKQ9UBT6 870 aa9.05□□□□□ -0.96
USP48-203ENST00000374732 SSX2IPQ9Y2D8 614 aa9.05□□□□□ -0.96
USP48-203ENST00000374732 C2CD2Q9Y426 696 aa9.05□□□□□ -0.96
USP48-203ENST00000374732 ATP6V0A2Q9Y487 856 aa9.05□□□□□ -0.96
USP48-203ENST00000374732 LRRFIP2Q9Y608 721 aaKnown RBP9.05□□□□□ -0.96
USP48-203ENST00000374732 NCKAP5LQ9HCH0 1330 aa9.05□□□□□ -0.96
USP48-203ENST00000374732 SCG2P13521 617 aa9.05□□□□□ -0.96
USP48-203ENST00000374732 CDC27P30260 824 aa9.05□□□□□ -0.96
USP48-203ENST00000374732 DNAJA1P31689 397 aaKnown RBP9.05□□□□□ -0.96
USP48-203ENST00000374732 NUCB2P80303 420 aa9.05□□□□□ -0.96
USP48-203ENST00000374732 MUM1Q2TAK8 710 aa9.05□□□□□ -0.96
USP48-203ENST00000374732 ILDR2Q71H61 639 aa9.05□□□□□ -0.96
USP48-203ENST00000374732 MILR1Q7Z6M3 343 aa9.05□□□□□ -0.96
USP48-203ENST00000374732 FAM114A1Q8IWE2 563 aa9.05□□□□□ -0.96
USP48-203ENST00000374732 STON2Q8WXE9 905 aa9.05□□□□□ -0.96
USP48-203ENST00000374732 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.05□□□□□ -0.963e-6■■■■■ 50.8
USP48-203ENST00000374732 MMADHCQ9H3L0 296 aaPredicted RBP9.05□□□□□ -0.96
USP48-203ENST00000374732 SH3GLB2Q9NR46 395 aa9.05□□□□□ -0.96
USP48-203ENST00000374732 TPCN1Q9ULQ1 816 aa9.05□□□□□ -0.96
USP48-203ENST00000374732 PRELID1Q9Y255 219 aa9.05□□□□□ -0.96
USP48-203ENST00000374732 UBAP1LF5GYI3 381 aa9.05□□□□□ -0.96
USP48-203ENST00000374732 TPM1P09493 284 aa9.05□□□□□ -0.96
USP48-203ENST00000374732 KCNA6P17658 529 aa9.05□□□□□ -0.96
USP48-203ENST00000374732 NUCB1Q02818 461 aa9.05□□□□□ -0.96
USP48-203ENST00000374732 MGARPQ8TDB4 240 aa9.05□□□□□ -0.96
USP48-203ENST00000374732 DNAAF4Q8WXU2 420 aa9.05□□□□□ -0.96
USP48-203ENST00000374732 RPGRQ92834 1020 aaKnown RBP9.05□□□□□ -0.96
USP48-203ENST00000374732 ZNF335Q9H4Z2 1342 aaPredicted RBP9.04□□□□□ -0.96
USP48-203ENST00000374732 RPSAP08865 295 aaKnown RBP9.04□□□□□ -0.96
USP48-203ENST00000374732 CEBPAP49715 358 aaPredicted RBP9.04□□□□□ -0.96
USP48-203ENST00000374732 CFAP70Q5T0N1 1121 aa9.04□□□□□ -0.96
USP48-203ENST00000374732 CPLX2Q6PUV4 134 aaKnown RBP9.04□□□□□ -0.96
USP48-203ENST00000374732 RABGGTAQ92696 567 aa9.04□□□□□ -0.96
USP48-203ENST00000374732 TTC12Q9H892 705 aaPredicted RBP9.04□□□□□ -0.96
USP48-203ENST00000374732 ENAMQ9NRM1 1142 aa9.04□□□□□ -0.96
USP48-203ENST00000374732 MKL2Q9ULH7 1088 aa9.04□□□□□ -0.96
USP48-203ENST00000374732 SNX5Q9Y5X3 404 aa9.04□□□□□ -0.96
USP48-203ENST00000374732 KNDC1Q76NI1 1749 aa9.04□□□□□ -0.96
USP48-203ENST00000374732 MYCP01106 439 aaPredicted RBP9.04□□□□□ -0.96
USP48-203ENST00000374732 SLC4A1P02730 911 aa9.04□□□□□ -0.96
USP48-203ENST00000374732 KIF5BP33176 963 aa9.04□□□□□ -0.96
USP48-203ENST00000374732 CSE1LP55060 971 aaKnown RBP9.04□□□□□ -0.96
USP48-203ENST00000374732 POSTNQ15063 836 aa9.04□□□□□ -0.96
USP48-203ENST00000374732 LEKR1Q6ZMV7 388 aa9.04□□□□□ -0.96
USP48-203ENST00000374732 KRT222Q8N1A0 295 aa9.04□□□□□ -0.96
USP48-203ENST00000374732 C3orf20Q8ND61 904 aa9.04□□□□□ -0.96
USP48-203ENST00000374732 HVCN1Q96D96 273 aa9.04□□□□□ -0.96
USP48-203ENST00000374732 EME2A4GXA9 379 aaPredicted RBP9.03□□□□□ -0.96
USP48-203ENST00000374732 TMEM88BA6NKF7 163 aa9.03□□□□□ -0.96
USP48-203ENST00000374732 HDAC6Q9UBN7 1215 aa9.03□□□□□ -0.96
USP48-203ENST00000374732 ATP6V1G1O75348 118 aa9.03□□□□□ -0.96
USP48-203ENST00000374732 PPP2R1AP30153 589 aa9.03□□□□□ -0.96
USP48-203ENST00000374732 RANBP1P43487 201 aa9.03□□□□□ -0.96
USP48-203ENST00000374732 SOS1Q07889 1333 aaPredicted RBP9.03□□□□□ -0.96
USP48-203ENST00000374732 SFSWAPQ12872 951 aaKnown RBP9.03□□□□□ -0.96
USP48-203ENST00000374732 GRIK3Q13003 919 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms