RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Hook1Q8BIL5 728 aa15.5■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Sec62Q8BU14 398 aaKnown RBP15.5■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Myl6bQ8CI43 207 aa15.5■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Mtcl1Q3UHU5 1945 aa15.5■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Cfap99A0A140LIX9 648 aa15.5■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Myl3P09542 204 aa15.5■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Zhx1P70121 873 aa15.5■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Stn1Q8K2X3 378 aa15.5■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Jag1Q9QXX0 1218 aa15.5■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Aak1Q3UHJ0 959 aa15.49■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Ccdc47Q9D024 483 aaKnown RBP15.49■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Hmgn5Q9JL35 406 aa15.49■□□□□ 0.07
Rnf4-204ENSMUST00000182047 AfdnQ9QZQ1 1820 aaKnown RBP15.49■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Wdhd1P59328 1117 aa15.49■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Ap5z1Q3U829 807 aa15.49■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Ccz1Q8C1Y8 480 aa15.49■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Dynll2Q9D0M5 89 aa15.49■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Dnm1P39053 867 aa15.48■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Mtx1P47802 317 aa15.48■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Sec23aQ01405 765 aa15.48■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Sned1Q70E20 1403 aa15.48■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Cfap58B2RW38 873 aa15.48■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Ttll4Q80UG8 1193 aa15.48■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Pramel6Q810Y9 485 aa15.48■□□□□ 0.07
Rnf4-204ENSMUST00000182047 UvssaQ9D479 717 aa15.48■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Ifi35Q9D8C4 286 aa15.48■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Clic4Q9QYB1 253 aa15.48■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Chd5A2A8L1 1946 aa15.47■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Kifc2O08672 792 aa15.47■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Tpm3P21107 285 aaKnown RBP15.47■□□□□ 0.07
Rnf4-204ENSMUST00000182047 TbcaP48428 108 aaKnown RBP15.47■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Terf1P70371 421 aa15.47■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Pus7lQ8CE46 702 aa15.47■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Paf1Q8K2T8 535 aa15.47■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Nup133Q8R0G9 1155 aa15.47■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Cdc45Q9Z1X9 566 aa15.47■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Prr16A3KMN5 304 aa15.47■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Usp53P15975 1069 aa15.47■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Esyt2Q3TZZ7 845 aa15.47■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Cep63Q3UPP8 700 aa15.47■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Kif22Q3V300 660 aa15.47■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Usp50Q6P8X6 390 aa15.47■□□□□ 0.07
Rnf4-204ENSMUST00000182047 QarsQ8BML9 775 aa15.47■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Col23a1Q8K4G2 532 aa15.47■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Ccer1Q9CQL2 403 aa15.47■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Lonrf3Q9D4H7 753 aa15.47■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Prom2Q3UUY6 835 aa15.47■□□□□ 0.07
Rnf4-204ENSMUST00000182047 TfrcQ62351 763 aaKnown RBP15.47■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Ttc27Q8CD92 847 aa15.47■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Mtmr3Q8K296 1196 aa15.47■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Trmt44Q9D2Q2 713 aa15.47■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Gtf2iQ9ESZ8 998 aaKnown RBP15.47■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Phrf1A6H619 1682 aa15.46■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Rpusd2Q149F1 553 aa15.46■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Slitrk3Q810B9 980 aa15.46■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Skor1Q8BX46 964 aa15.46■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Tlcd1Q99JT6 247 aa15.46■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Rai14Q9EP71 979 aaKnown RBP15.46■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Pik3ap1Q9EQ32 811 aa15.46■□□□□ 0.07
Rnf4-204ENSMUST00000182047 Pramel3A2AHA7 463 aa15.46■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Gm7903A2AWL1 463 aa15.46■□□□□ 0.06
Rnf4-204ENSMUST00000182047 AV320801A2AWL3 467 aa15.46■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Gm15023L7MUB4 467 aa15.46■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Cplx2P84086 134 aa15.46■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Ckap2Q3V1H1 664 aa15.46■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Best3Q6H1V1 669 aa15.46■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Kcnj14Q8JZN3 434 aa15.46■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Rtn1Q8K0T0 780 aa15.46■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Atp6v1aP50516 617 aaKnown RBP15.45■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Foxp1P58462 705 aa15.45■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Frat1P70339 274 aa15.45■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Cdkl5Q3UTQ8 938 aa15.45■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Prkag3Q8BGM7 489 aa15.45■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Tsen34Q8BMZ5 316 aa15.45■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Plcd3Q8K2J0 785 aa15.45■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Col20a1Q923P0 1320 aa15.45■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Bin1O08539 588 aaKnown RBP15.45■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Ankrd13aQ80UP5 588 aa15.45■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Ndufv1Q91YT0 464 aa15.45■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Dnajc14Q921R4 703 aa15.45■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Hps4Q99KG7 671 aa15.45■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Ccdc112A0AUP1 442 aa15.44■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Kif23E9Q5G3 953 aa15.44■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Atp2b1G5E829 1220 aa15.44■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Slc1a4O35874 532 aa15.44■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Col4a3bpQ9EQG9 624 aa15.44■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Ccng2O08918 344 aa15.44■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Ptpn12P35831 775 aa15.44■□□□□ 0.06
Rnf4-204ENSMUST00000182047 VmacQ8BP01 174 aa15.44■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Etnk1Q9D4V0 363 aa15.44■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Ubac1Q8VDI7 409 aa15.44■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Cplx1P63040 134 aa15.43■□□□□ 0.06
Rnf4-204ENSMUST00000182047 1700013D24RikQ0P521 120 aa15.43■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Hps3Q91VB4 1002 aa15.43■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Ptf1aQ9QX98 324 aa15.43■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Aox4Q3TYQ9 1336 aa15.43■□□□□ 0.06
Rnf4-204ENSMUST00000182047 A0A1Y7VML8 143 aa15.43■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Ftl1P29391 183 aa15.43■□□□□ 0.06
Rnf4-204ENSMUST00000182047 Fbln2P37889 1221 aa15.43■□□□□ 0.06
Rnf4-204ENSMUST00000182047 XpcP51612 930 aa15.43■□□□□ 0.06
Retrieved 100 of 22,080 RNA–protein pairs in 54.8 ms