RNA–Protein interactions for RNA: ENSMUST00000111044.2

Bdnf-204, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,854 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-204ENSMUST00000111044 BaatQ91X34 420 aa8.42□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Smco2Q9DA21 347 aa8.42□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Rsrc1Q9DBU6 334 aa8.42□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Kcnh3Q9WVJ0 1095 aa8.42□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Znf335A2A5K6 1337 aa8.42□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Zfy1P10925 782 aa8.41□□□□□ -1.06
Bdnf-204ENSMUST00000111044 HalP35492 657 aa8.41□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Pa2g4P50580 394 aaKnown RBP8.41□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Zbtb45Q52KG4 520 aa8.41□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Nab2Q61127 525 aa8.41□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Ncaph2Q8BSP2 607 aa8.41□□□□□ -1.06
Bdnf-204ENSMUST00000111044 4930519G04RikQ9CPT7 205 aa8.41□□□□□ -1.06
Bdnf-204ENSMUST00000111044 RarsQ9D0I9 660 aaKnown RBP8.41□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Mfap3lQ9D3X9 409 aa8.41□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Echdc1Q9D9V3 322 aa8.41□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Mrpl12Q9DB15 201 aaKnown RBP8.41□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Large1Q9Z1M7 756 aa8.41□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Enc1O35709 589 aa8.41□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Cdkl5Q3UTQ8 938 aa8.41□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Usp13Q5BKP2 858 aa8.41□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Jade2Q6ZQF7 829 aa8.41□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Fnbp1Q80TY0 616 aa8.41□□□□□ -1.06
Bdnf-204ENSMUST00000111044 GphnQ8BUV3 769 aaKnown RBP8.41□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Ythdf3Q8BYK6 585 aaKnown RBP8.41□□□□□ -1.06
Bdnf-204ENSMUST00000111044 StrbpQ91WM1 672 aaKnown RBP8.41□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Ccdc97Q9DBT3 340 aa8.41□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Neurod6P48986 337 aa8.41□□□□□ -1.06
Bdnf-204ENSMUST00000111044 RubcnlQ3TD16 648 aa8.41□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Gigyf2Q6Y7W8 1291 aaKnown RBP8.41□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Phf8Q80TJ7 1023 aa8.41□□□□□ -1.06
Bdnf-204ENSMUST00000111044 E2f4Q8R0K9 410 aa8.41□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Flad1Q8R123 492 aa8.41□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Usp42B2RQC2 1324 aaKnown RBP8.41□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Kif1aP33173 1695 aa8.41□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Cps1Q8C196 1500 aa8.4□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Rbbp8nlA2ABX0 614 aa8.4□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Tlr7P58681 1050 aa8.4□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Tcp11Q01755 566 aa8.4□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Ccdc138Q0VF22 680 aa8.4□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Gsdma2Q32M21 443 aa8.4□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Ehbp1Q69ZW3 1231 aa8.4□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Asnsd1Q8BFS9 627 aa8.4□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Tldc1Q8K0P3 455 aa8.4□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Vmn1r218Q8R261 298 aa8.4□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Atp6v0a4Q920R6 833 aa8.4□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Tubgcp2Q921G8 905 aa8.4□□□□□ -1.06
Bdnf-204ENSMUST00000111044 IncenpQ9WU62 880 aa8.4□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Chd4Q6PDQ2 1915 aaKnown RBP8.4□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Gm21680A0A0G2JGR8 267 aa8.4□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Ano9P86044 747 aa8.4□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Cep104Q80V31 926 aa8.4□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Bsdc1Q80Y55 427 aa8.4□□□□□ -1.06
Bdnf-204ENSMUST00000111044 D130040H23RikQ8BII3 405 aa8.4□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Gbp9Q8BTS3 619 aa8.4□□□□□ -1.06
Bdnf-204ENSMUST00000111044 AceP09470 1312 aa8.4□□□□□ -1.06
Bdnf-204ENSMUST00000111044 Slit3Q9WVB4 1523 aa8.4□□□□□ -1.06
Bdnf-204ENSMUST00000111044 E9QMW4 1145 aa8.4□□□□□ -1.07
Bdnf-204ENSMUST00000111044 SsbP32067 415 aaKnown RBP8.4□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Znf697Q569E7 569 aa8.4□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Myo6Q64331 1265 aa8.4□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Gga2Q6P5E6 603 aa8.4□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Tcp11l1Q8BTG3 509 aa8.4□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Bpifb6Q8BU51 449 aa8.4□□□□□ -1.07
Bdnf-204ENSMUST00000111044 MbipQ99LQ1 341 aa8.4□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Fbxl16A2RT62 479 aa8.39□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Cpsf2O35218 782 aaKnown RBP8.39□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Casp8O89110 480 aa8.39□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Adssl1P28650 457 aa8.39□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Sox5P35710 763 aa8.39□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Mphosph6Q9D1Q1 161 aa8.39□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Pramel3A2AHA7 463 aa8.39□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Gm7903A2AWL1 463 aa8.39□□□□□ -1.07
Bdnf-204ENSMUST00000111044 AV320801A2AWL3 467 aa8.39□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Gm7361D3Z6R1 267 aa8.39□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Gm15023L7MUB4 467 aa8.39□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Ampd3O08739 766 aa8.39□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Rgs9O54828 675 aa8.39□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Kif5cP28738 956 aaKnown RBP8.39□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Naa35Q6PHQ8 725 aa8.39□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Tacc1Q6Y685 774 aa8.39□□□□□ -1.07
Bdnf-204ENSMUST00000111044 RalylQ8BTF8 293 aa8.39□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Aipl1Q924K1 328 aa8.39□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Trim66Q924W6 1242 aa8.39□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Tmed5Q9CXE7 229 aa8.39□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Tube1Q9D6T1 475 aa8.39□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Fam217aQ9D9W6 419 aa8.39□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Foxp4Q9DBY0 795 aaKnown RBP8.39□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Atf5O70191 283 aa8.39□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Hoxc9P09633 260 aa8.39□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Spty2d1Q68FG3 682 aa8.39□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Leng8Q8CBY3 785 aaKnown RBP8.39□□□□□ -1.07
Bdnf-204ENSMUST00000111044 ClasrpQ8CFC7 668 aa8.39□□□□□ -1.07
Bdnf-204ENSMUST00000111044 P3h4Q8K2B0 443 aa8.39□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Gm28919A0A087WP35 240 aa8.38□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Cnksr1A2A9K7 700 aa8.38□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Ccdc24E9PUW8 296 aa8.38□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Trove2O08848 538 aa8.38□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Me1P06801 572 aa8.38□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Pla2g4bP0C871 782 aa8.38□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Slc7a1Q09143 622 aa8.38□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms