RNA–Protein interactions for RNA: ENSMUST00000021278.13

Ctc1-201, Transcript of CST complex subunit CTC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ctc1, Length 4,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-201ENSMUST00000021278 Spc24Q9D083 201 aa10.37□□□□□ -0.75
Ctc1-201ENSMUST00000021278 MajinQ9D992 256 aa10.37□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Setd1aE9PYH6 1716 aa10.37□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Scgb2b7D3YYY1 112 aa10.37□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Slc12a2P55012 1205 aa10.37□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Tubb4bP68372 445 aaKnown RBP10.37□□□□□ -0.75
Ctc1-201ENSMUST00000021278 MaeaQ4VC33 396 aa10.37□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Ano1Q8BHY3 960 aa10.37□□□□□ -0.75
Ctc1-201ENSMUST00000021278 SltmQ8CH25 1031 aaKnown RBP10.37□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Q8R1Y2 203 aa10.37□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Egfl6Q9JJZ5 550 aa10.37□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Thsd7aQ69ZU6 1645 aa10.37□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Rreb1Q3UH06 1700 aaKnown RBP10.37□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Lrriq4A6H6A4 596 aa10.36□□□□□ -0.75
Ctc1-201ENSMUST00000021278 RalgdsQ03385 852 aa10.36□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Cog7Q3UM29 770 aa10.36□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Ppp1r1bQ60829 194 aa10.36□□□□□ -0.75
Ctc1-201ENSMUST00000021278 GopcQ8BH60 463 aa10.36□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Cdca8Q8BHX3 289 aa10.36□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Vps53Q8CCB4 832 aa10.36□□□□□ -0.75
Ctc1-201ENSMUST00000021278 HdlbpQ8VDJ3 1268 aaKnown RBP10.36□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Ccdc91Q9D8L5 442 aa10.36□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Wdr46Q9Z0H1 622 aaKnown RBP10.36□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Nat3P50296 290 aa10.36□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Ksr1Q61097 873 aa10.36□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Myo6Q64331 1265 aa10.36□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Mum1Q6DID5 682 aa10.36□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Ccdc50Q810U5 305 aaKnown RBP10.36□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Bag2Q91YN9 210 aa10.36□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Unc45aQ99KD5 944 aa10.36□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Stat2Q9WVL2 923 aa10.36□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Mtus1Q5HZI1 1210 aa10.36□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Utp18Q5SSI6 552 aaKnown RBP10.36□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Ovgp1Q62010 721 aa10.36□□□□□ -0.75
Ctc1-201ENSMUST00000021278 HltfQ6PCN7 1003 aa10.36□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Ccdc172Q810N9 267 aa10.36□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Flad1Q8R123 492 aa10.36□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Ankrd2Q9WV06 328 aa10.36□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Lmtk3Q5XJV6 1424 aa10.36□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Kif5cP28738 956 aaKnown RBP10.36□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Fsd1Q7TPM6 496 aa10.36□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Usp8Q80U87 1080 aa10.36□□□□□ -0.75
Ctc1-201ENSMUST00000021278 EngaseQ8BX80 734 aa10.36□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Cadps2Q8BYR5 1297 aa10.36□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Slit2Q9R1B9 1521 aa10.35□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Erich2E9Q1A6 463 aa10.35□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Gjc1P28229 396 aa10.35□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Prkar2bP31324 416 aa10.35□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Ercc5P35689 1170 aa10.35□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Ccdc138Q0VF22 680 aa10.35□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Tex11Q14AT2 947 aa10.35□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Mrps25Q9D125 171 aaKnown RBP10.35□□□□□ -0.75
Ctc1-201ENSMUST00000021278 IqcdQ9D3V1 458 aa10.35□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Klhl41A2AUC9 606 aa10.35□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Heatr4E9Q357 955 aa10.35□□□□□ -0.75
Ctc1-201ENSMUST00000021278 CflarO35732 481 aa10.35□□□□□ -0.75
Ctc1-201ENSMUST00000021278 GckP52792 465 aa10.35□□□□□ -0.75
Ctc1-201ENSMUST00000021278 ChukQ60680 745 aa10.35□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Swap70Q6A028 585 aaKnown RBP10.35□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Atl2Q6PA06 583 aa10.35□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Phf8Q80TJ7 1023 aa10.35□□□□□ -0.75
Ctc1-201ENSMUST00000021278 ParnQ8VDG3 624 aa10.35□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Atp6v0a4Q920R6 833 aa10.35□□□□□ -0.75
Ctc1-201ENSMUST00000021278 RpainQ9CWY9 219 aa10.35□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Ccdc182Q9D9C6 152 aa10.35□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Pik3c2bE9QAN8 1632 aa10.35□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Lrrc7Q80TE7 1490 aa10.35□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Wdr17E9Q271 1322 aa10.35□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Gm21698A0A087WQP8 267 aa10.35□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Pde8aO88502 823 aa10.35□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Art2aP17981 287 aa10.35□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Ctnnd1P30999 938 aaKnown RBP10.35□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Fam207aP58468 219 aaKnown RBP10.35□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Dact3Q0PHV7 610 aa10.35□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Ero1aQ8R180 464 aa10.35□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Abca8aQ8K442 1620 aa10.35□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Col14a1Q80X19 1797 aa10.35□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Trpc6Q61143 930 aa10.34□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Ppp1r14bQ62084 147 aa10.34□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Eif2aQ8BJW6 581 aaKnown RBP10.34□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Pcdhb15Q91Y04 786 aa10.34□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Taf7lQ9D3R9 471 aa10.34□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Klhl10Q9D5V2 608 aa10.34□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Smco2Q9DA21 347 aa10.34□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Tlr9Q9EQU3 1032 aa10.34□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Entpd5Q9WUZ9 427 aa10.34□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Pik3c2aQ61194 1686 aa10.34□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Krt8P11679 490 aaKnown RBP10.34□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Cwf19l1Q8CI33 537 aa10.34□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Fgd4Q91ZT5 766 aa10.34□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Baiap2l1Q9DBJ3 514 aa10.34□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Atp12aQ9Z1W8 1035 aa10.34□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Ankrd44B2RXR6 993 aa10.34□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Ppp1r12bQ8BG95 976 aa10.34□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Dzip1Q8BMD2 852 aa10.34□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Larp6Q8BN59 492 aa10.34□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Gpcpd1Q8C0L9 675 aa10.34□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Mtmr3Q8K296 1196 aa10.34□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Rnf34Q99KR6 376 aa10.34□□□□□ -0.75
Ctc1-201ENSMUST00000021278 GfapP03995 430 aa10.33□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 12.6 ms