RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Gm5150Q1AN92 299 aa10.03□□□□□ -0.8
Pdlim5-208ENSMUST00000196220 Tmem88bQ3TYP4 173 aa10.03□□□□□ -0.8
Pdlim5-208ENSMUST00000196220 Fam216aQ9DB54 251 aa10.03□□□□□ -0.8
Pdlim5-208ENSMUST00000196220 Tex26Q0VB26 296 aa10.02□□□□□ -0.8
Pdlim5-208ENSMUST00000196220 Q24JP4 165 aa10.02□□□□□ -0.8
Pdlim5-208ENSMUST00000196220 Tmem136Q3TYE7 245 aa10.02□□□□□ -0.8
Pdlim5-208ENSMUST00000196220 Olfr317Q5NCD6 327 aa10.02□□□□□ -0.8
Pdlim5-208ENSMUST00000196220 Cyyr1Q8VIH7 165 aa10.02□□□□□ -0.8
Pdlim5-208ENSMUST00000196220 Trav6n-6A0A075B6B2 114 aa10.02□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Scgb1b11A0A087WQJ0 93 aa10.02□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 P06334 169 aa10.02□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 AY761185Q5ERI8 94 aa10.02□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Dynlrb2Q9DAJ5 96 aa10.02□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Ighv5-9-1A0A0A6YVS4 126 aa10.01□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Igkv4-62A0A0G2JDW9 117 aa10.01□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Esp3J3QN49 87 aa10.01□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Ins1P01325 108 aa10.01□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Psmb8P28063 276 aa10.01□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Runx1Q03347 451 aa10.01□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Ndufb4Q9CQC7 129 aa10.01□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Tppp3Q9CRB6 176 aaKnown RBP10.01□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 OtorQ9JIE3 128 aa10.01□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Usp9xP70398 2559 aaKnown RBP10.01□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 A0A286YCQ8 80 aa10□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 S100a4P07091 101 aa10□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Cd24P24807 76 aa10□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Gng4P50153 75 aa10□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Gm12888Q3UW77 119 aa10□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Hspb8Q9JK92 196 aa10□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Muc2Q80Z19 2680 aa10□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Ighv1-66A0A075B5X5 117 aa9.99□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Gm26661M0QWV4 156 aa9.99□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 LhbO09108 141 aa9.99□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 TshbP12656 138 aa9.99□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Gm1968Q3T9I3 115 aa9.99□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Cox7a2lQ61387 111 aa9.99□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Bud31Q6PGH1 103 aa9.99□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Wfdc15aQ8BH89 80 aa9.99□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Spink10Q8CAC8 162 aa9.99□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Mrpl36Q99N90 102 aa9.99□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Ighv8-4A0A0A6YW26 117 aa9.99□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 A930009A15RikG3UYI6 118 aa9.99□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Gm10553J3QPF1 123 aa9.99□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 MsmbO08540 113 aa9.99□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Lgals6O54891 301 aa9.99□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Hoxd3P09027 433 aa9.99□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Timm8bP62077 83 aaKnown RBP9.99□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Gm5464Q3UY29 175 aa9.99□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Ndufa4Q62425 82 aaKnown RBP9.99□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Fam222aQ6PGH4 453 aa9.99□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Cdpf1Q8R3A2 119 aa9.99□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Snai3Q9QY31 287 aa9.99□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Zfyve26Q5DU37 2529 aa9.98□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Gm12845A0A0N4SUM5 588 aa9.98□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 4930564D02RikQ9D4S4 103 aa9.98□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Spata25Q9DA57 226 aa9.98□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Arid1bE9Q4N7 2244 aa9.97□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Prrc2aQ7TSC1 2158 aaKnown RBP9.97□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Ighv3-8A0A075B5T0 131 aa9.97□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Ighv2-3A0A075B696 115 aa9.97□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 A730046J19RikA0A1B0GSN8 89 aa9.97□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 A0A1Y7VMQ4 148 aa9.97□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 P06330 118 aa9.97□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Mcrip2Q9CQB2 160 aaKnown RBP9.97□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Gkn1Q9CR36 201 aa9.97□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 TroQ6DIC6 2087 aa9.97□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Trbv16A0A0B4J1H3 115 aa9.96□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Gm5089A1L3C8 106 aa9.96□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Gm8439G3UWA7 96 aa9.96□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 P0C913 63 aa9.96□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Rpl32P62911 135 aaKnown RBP9.96□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Defb2P82020 71 aa9.96□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Mien1Q9CQ86 115 aa9.96□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Iah1Q9DB29 249 aa9.96□□□□□ -0.81
Pdlim5-208ENSMUST00000196220 Ighv2-7A0A075B5Q8 116 aa9.96□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 Trdv2-1A0A0G2JGB9 116 aa9.96□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 Umad1E0CX23 159 aa9.96□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 Gm28305F6U473 122 aa9.96□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 Rnf183Q8QZS5 190 aa9.96□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 Chac1Q8R3J5 223 aa9.96□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 Ormdl2Q9CQZ0 153 aa9.96□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 Ankrd17Q99NH0 2603 aaKnown RBP9.95□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 Akap6E9Q9K8 2307 aa9.95□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 Trbv14A0A140T8L9 115 aa9.95□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 Gm20499D3Z4G5 72 aa9.95□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 Gm17430F6RSK3 157 aa9.95□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 Vsig4F6TUL9 280 aa9.95□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 Ly86O88188 162 aa9.95□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 P06328 117 aa9.95□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 Defa-rs1P17533 116 aa9.95□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 Sumo2P61957 95 aaKnown RBP9.95□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 Q3UNZ8 350 aa9.95□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 Khdc1cQ4KL78 166 aa9.95□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 Rbfox3Q8BIF2 374 aa9.95□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 Ndufc2Q9CQ54 120 aa9.95□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 Josd1Q9DBJ6 202 aa9.95□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 Fhl2O70433 279 aa9.94□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 MdfiP70331 251 aa9.94□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 Sdhaf1Q3U276 118 aa9.94□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 Isg15Q64339 161 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 69.5 ms