RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 A130051J06RikQ8CAU1 227 aa4.85□□□□□ -1.63
Lig4-202ENSMUST00000170033 Olfr365Q8VFT2 312 aa4.85□□□□□ -1.63
Lig4-202ENSMUST00000170033 Rnase4Q9JJH1 148 aa4.85□□□□□ -1.63
Lig4-202ENSMUST00000170033 DmdP11531 3678 aa4.85□□□□□ -1.63
Lig4-202ENSMUST00000170033 Igkv4-90A0A075B5L3 117 aa4.85□□□□□ -1.63
Lig4-202ENSMUST00000170033 Tcrg-C1A0A075B5Z0 172 aa4.85□□□□□ -1.63
Lig4-202ENSMUST00000170033 Gm21983D6RFS9 131 aa4.85□□□□□ -1.63
Lig4-202ENSMUST00000170033 Defa1P11477 93 aa4.85□□□□□ -1.63
Lig4-202ENSMUST00000170033 Srp14P16254 110 aaKnown RBP4.85□□□□□ -1.63
Lig4-202ENSMUST00000170033 Ube2e1P52482 193 aa4.85□□□□□ -1.63
Lig4-202ENSMUST00000170033 Smr3aQ61900 147 aa4.85□□□□□ -1.63
Lig4-202ENSMUST00000170033 Olfr1272Q8VGN8 308 aa4.85□□□□□ -1.63
Lig4-202ENSMUST00000170033 Tctex1d1Q9D5I4 173 aa4.85□□□□□ -1.63
Lig4-202ENSMUST00000170033 Col12a1Q60847 3120 aa4.85□□□□□ -1.63
Lig4-202ENSMUST00000170033 Ighv1-20A0A0A6YX66 117 aa4.84□□□□□ -1.63
Lig4-202ENSMUST00000170033 Gm27021M0QWE2 156 aa4.84□□□□□ -1.63
Lig4-202ENSMUST00000170033 Cd59aO55186 123 aa4.84□□□□□ -1.63
Lig4-202ENSMUST00000170033 Defa16P50714 93 aa4.84□□□□□ -1.63
Lig4-202ENSMUST00000170033 Olfr311Q5NC59 308 aa4.84□□□□□ -1.63
Lig4-202ENSMUST00000170033 Apoc4Q61268 124 aa4.84□□□□□ -1.63
Lig4-202ENSMUST00000170033 RhohQ9D3G9 191 aa4.84□□□□□ -1.63
Lig4-202ENSMUST00000170033 Hcfc2Q9D968 241 aa4.84□□□□□ -1.63
Lig4-202ENSMUST00000170033 Dido1Q8C9B9 2256 aaKnown RBP4.84□□□□□ -1.63
Lig4-202ENSMUST00000170033 Znrd1Q791N7 123 aa4.84□□□□□ -1.63
Lig4-202ENSMUST00000170033 QrfpQ8CE23 124 aa4.84□□□□□ -1.63
Lig4-202ENSMUST00000170033 Sec11aQ9R0P6 179 aa4.84□□□□□ -1.63
Lig4-202ENSMUST00000170033 Rabac1Q9Z0S9 185 aa4.84□□□□□ -1.63
Lig4-202ENSMUST00000170033 E130114P18RikF6S0S7 154 aa4.83□□□□□ -1.64
Lig4-202ENSMUST00000170033 BokO35425 213 aa4.83□□□□□ -1.64
Lig4-202ENSMUST00000170033 Myod1P10085 318 aa4.83□□□□□ -1.64
Lig4-202ENSMUST00000170033 Znf239P24399 201 aa4.83□□□□□ -1.64
Lig4-202ENSMUST00000170033 Cdx4Q07424 282 aa4.83□□□□□ -1.64
Lig4-202ENSMUST00000170033 Gm10188Q3V432 135 aa4.83□□□□□ -1.64
Lig4-202ENSMUST00000170033 Gm26566Q8CAC1 153 aa4.83□□□□□ -1.64
Lig4-202ENSMUST00000170033 Ifi27l2aQ8R412 90 aa4.83□□□□□ -1.64
Lig4-202ENSMUST00000170033 Ube2e2Q91W82 201 aa4.83□□□□□ -1.64
Lig4-202ENSMUST00000170033 Fam19a5Q91WE9 132 aa4.83□□□□□ -1.64
Lig4-202ENSMUST00000170033 Igkv4-57A0A0A6YYE7 117 aa4.83□□□□□ -1.64
Lig4-202ENSMUST00000170033 PlnP61014 52 aa4.83□□□□□ -1.64
Lig4-202ENSMUST00000170033 Fam222aQ6PGH4 453 aa4.83□□□□□ -1.64
Lig4-202ENSMUST00000170033 Gm10118Q8C8J5 116 aa4.83□□□□□ -1.64
Lig4-202ENSMUST00000170033 Gnb1lQ9EQ15 326 aa4.83□□□□□ -1.64
Lig4-202ENSMUST00000170033 Defb3Q9WTL0 63 aa4.83□□□□□ -1.64
Lig4-202ENSMUST00000170033 Trav14n-2A0A0G2JDF5 121 aa4.83□□□□□ -1.64
Lig4-202ENSMUST00000170033 Gm11213A0A1B0GR83 88 aa4.83□□□□□ -1.64
Lig4-202ENSMUST00000170033 Gm9970F6ZED4 185 aa4.83□□□□□ -1.64
Lig4-202ENSMUST00000170033 Gm10337F7DEP7 55 aa4.83□□□□□ -1.64
Lig4-202ENSMUST00000170033 Gm4791J3QQ14 102 aa4.83□□□□□ -1.64
Lig4-202ENSMUST00000170033 Ighv1-61P01749 117 aa4.83□□□□□ -1.64
Lig4-202ENSMUST00000170033 CrygbP04344 175 aa4.83□□□□□ -1.64
Lig4-202ENSMUST00000170033 Mfge8P21956 463 aaKnown RBP4.83□□□□□ -1.64
Lig4-202ENSMUST00000170033 Ly6gP35461 111 aa4.83□□□□□ -1.64
Lig4-202ENSMUST00000170033 Cacng7P62956 275 aa4.83□□□□□ -1.64
Lig4-202ENSMUST00000170033 Trav7d-3Q5R1I1 112 aa4.83□□□□□ -1.64
Lig4-202ENSMUST00000170033 Dlx1Q64317 255 aa4.83□□□□□ -1.64
Lig4-202ENSMUST00000170033 IcosQ9WVS0 200 aa4.83□□□□□ -1.64
Lig4-202ENSMUST00000170033 Ighv5-8A0A075B676 92 aa4.82□□□□□ -1.64
Lig4-202ENSMUST00000170033 Cdkn1aP39689 159 aa4.82□□□□□ -1.64
Lig4-202ENSMUST00000170033 Bsph1Q3UW26 133 aa4.82□□□□□ -1.64
Lig4-202ENSMUST00000170033 Ndufa4l2Q4FZG9 87 aa4.82□□□□□ -1.64
Lig4-202ENSMUST00000170033 Ndufc2Q9CQ54 120 aa4.82□□□□□ -1.64
Lig4-202ENSMUST00000170033 SNORCQ9CXL7 121 aa4.82□□□□□ -1.64
Lig4-202ENSMUST00000170033 Pradc1Q9D9N8 188 aa4.82□□□□□ -1.64
Lig4-202ENSMUST00000170033 Q9DAB9 146 aa4.82□□□□□ -1.64
Lig4-202ENSMUST00000170033 Pcnx1Q9QYC1 2344 aa4.82□□□□□ -1.64
Lig4-202ENSMUST00000170033 Csmd1Q923L3 3564 aa4.82□□□□□ -1.64
Lig4-202ENSMUST00000170033 Socs3O35718 225 aa4.82□□□□□ -1.64
Lig4-202ENSMUST00000170033 Gp9O88186 177 aa4.82□□□□□ -1.64
Lig4-202ENSMUST00000170033 Gm904Q3V2L5 102 aa4.82□□□□□ -1.64
Lig4-202ENSMUST00000170033 Gm5941Q497P9 117 aa4.82□□□□□ -1.64
Lig4-202ENSMUST00000170033 Chac1Q8R3J5 223 aa4.82□□□□□ -1.64
Lig4-202ENSMUST00000170033 Olfr981Q8VEU2 310 aa4.82□□□□□ -1.64
Lig4-202ENSMUST00000170033 Cyyr1Q8VIH7 165 aa4.82□□□□□ -1.64
Lig4-202ENSMUST00000170033 Tomm6Q9CQN3 74 aa4.82□□□□□ -1.64
Lig4-202ENSMUST00000170033 Cysrt1Q9D1E4 142 aa4.82□□□□□ -1.64
Lig4-202ENSMUST00000170033 Trdv2-1A0A0G2JGB9 116 aa4.81□□□□□ -1.64
Lig4-202ENSMUST00000170033 Reg3gO09049 174 aa4.81□□□□□ -1.64
Lig4-202ENSMUST00000170033 Trdv2-2Q5R1A4 116 aa4.81□□□□□ -1.64
Lig4-202ENSMUST00000170033 Ovol2Q8CIV7 274 aa4.81□□□□□ -1.64
Lig4-202ENSMUST00000170033 AcanQ61282 2132 aaKnown RBP4.81□□□□□ -1.64
Lig4-202ENSMUST00000170033 Celsr3Q91ZI0 3301 aa4.81□□□□□ -1.64
Lig4-202ENSMUST00000170033 Akap9Q70FJ1 3797 aa4.81□□□□□ -1.64
Lig4-202ENSMUST00000170033 Ighv3-4A0A0A6YXF1 117 aa4.81□□□□□ -1.64
Lig4-202ENSMUST00000170033 Taf15Q8BQ46 557 aaKnown RBP4.81□□□□□ -1.64
Lig4-202ENSMUST00000170033 Mrpl33Q9CQP0 65 aa4.81□□□□□ -1.64
Lig4-202ENSMUST00000170033 Stpg1Q9D2F5 341 aa4.81□□□□□ -1.64
Lig4-202ENSMUST00000170033 Obox1Q9D350 204 aa4.81□□□□□ -1.64
Lig4-202ENSMUST00000170033 Saa3P04918 122 aa4.81□□□□□ -1.64
Lig4-202ENSMUST00000170033 Gata1P17679 413 aa4.81□□□□□ -1.64
Lig4-202ENSMUST00000170033 MycbQ6P8Z1 170 aa4.81□□□□□ -1.64
Lig4-202ENSMUST00000170033 E130116L18RikQ8BMV6 101 aa4.81□□□□□ -1.64
Lig4-202ENSMUST00000170033 Gm9961Q8BNV2 113 aa4.81□□□□□ -1.64
Lig4-202ENSMUST00000170033 Gm9949Q8C9F4 104 aa4.81□□□□□ -1.64
Lig4-202ENSMUST00000170033 Bub3Q9WVA3 326 aa4.81□□□□□ -1.64
Lig4-202ENSMUST00000170033 Dopey1Q8BL99 2399 aa4.8□□□□□ -1.64
Lig4-202ENSMUST00000170033 Trbv31A0A075B5J5 111 aa4.8□□□□□ -1.64
Lig4-202ENSMUST00000170033 Ighv12-3A0A075B5T1 117 aa4.8□□□□□ -1.64
Lig4-202ENSMUST00000170033 Smim10l1A0A087WNQ7 89 aa4.8□□□□□ -1.64
Lig4-202ENSMUST00000170033 Gm29289A0A087WPY7 166 aa4.8□□□□□ -1.64
Lig4-202ENSMUST00000170033 Igkv4-59A0A0B4J1I8 117 aa4.8□□□□□ -1.64
Retrieved 100 of 22,080 RNA–protein pairs in 79.9 ms