RNA–Protein interactions for RNA: ENSMUST00000168878.7

Shroom3-204, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 5,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-204ENSMUST00000168878 BC048502Q80Y74 154 aa13.36□□□□□ -0.27
Shroom3-204ENSMUST00000168878 Il22ra2Q80XF5 230 aa13.35□□□□□ -0.27
Shroom3-204ENSMUST00000168878 9930022D16RikQ8BG27 128 aa13.35□□□□□ -0.27
Shroom3-204ENSMUST00000168878 Trav14d-3-dv8A0A075B619 120 aa13.35□□□□□ -0.27
Shroom3-204ENSMUST00000168878 Igkv4-59A0A0B4J1I8 117 aa13.35□□□□□ -0.27
Shroom3-204ENSMUST00000168878 Defa27F2Z403 93 aa13.35□□□□□ -0.27
Shroom3-204ENSMUST00000168878 Prdm6Q3UZD5 596 aa13.35□□□□□ -0.27
Shroom3-204ENSMUST00000168878 Zc2hc1aQ8BJH1 324 aa13.35□□□□□ -0.27
Shroom3-204ENSMUST00000168878 Smim10l1A0A087WNQ7 89 aa13.35□□□□□ -0.27
Shroom3-204ENSMUST00000168878 Hrct1Q9D6B9 109 aa13.35□□□□□ -0.27
Shroom3-204ENSMUST00000168878 Tmem263Q9DAM7 115 aa13.35□□□□□ -0.27
Shroom3-204ENSMUST00000168878 Wfdc2Q9DAU7 174 aa13.35□□□□□ -0.27
Shroom3-204ENSMUST00000168878 P04942 107 aa13.35□□□□□ -0.27
Shroom3-204ENSMUST00000168878 Fam208bQ5DTT3 2382 aa13.35□□□□□ -0.27
Shroom3-204ENSMUST00000168878 Tmem210Q9D2F0 147 aa13.34□□□□□ -0.27
Shroom3-204ENSMUST00000168878 NpsP0C0P8 89 aa13.34□□□□□ -0.27
Shroom3-204ENSMUST00000168878 Mrps12O35680 139 aa13.34□□□□□ -0.27
Shroom3-204ENSMUST00000168878 NpbQ8K4P1 119 aa13.34□□□□□ -0.27
Shroom3-204ENSMUST00000168878 Ncor2Q9WU42 2472 aaKnown RBP13.34□□□□□ -0.27
Shroom3-204ENSMUST00000168878 Gm19684G3UZ45 117 aa13.33□□□□□ -0.27
Shroom3-204ENSMUST00000168878 Ptprz1B9EKR1 2312 aa13.33□□□□□ -0.27
Shroom3-204ENSMUST00000168878 Ighv1-4A0A075B5T4 117 aa13.33□□□□□ -0.28
Shroom3-204ENSMUST00000168878 Ighv1-58A0A075B5W9 117 aa13.33□□□□□ -0.28
Shroom3-204ENSMUST00000168878 Ly6g5bQ8K1T4 194 aa13.33□□□□□ -0.28
Shroom3-204ENSMUST00000168878 Ss18l2Q9D174 77 aa13.33□□□□□ -0.28
Shroom3-204ENSMUST00000168878 Zfp407G3UVV3 2246 aa13.33□□□□□ -0.28
Shroom3-204ENSMUST00000168878 Obsl1D3YYU8 1804 aaKnown RBP13.33□□□□□ -0.28
Shroom3-204ENSMUST00000168878 MylkQ6PDN3 1941 aaKnown RBP13.33□□□□□ -0.28
Shroom3-204ENSMUST00000168878 Reg3gO09049 174 aa13.33□□□□□ -0.28
Shroom3-204ENSMUST00000168878 Ighv1-50A0A075B5W1 117 aa13.32□□□□□ -0.28
Shroom3-204ENSMUST00000168878 P01739 132 aa13.32□□□□□ -0.28
Shroom3-204ENSMUST00000168878 Cnot1Q6ZQ08 2375 aaKnown RBP13.32□□□□□ -0.28
Shroom3-204ENSMUST00000168878 Igkv8-16A0A0G2JDG9 121 aa13.32□□□□□ -0.28
Shroom3-204ENSMUST00000168878 Cox7cP17665 63 aa13.32□□□□□ -0.28
Shroom3-204ENSMUST00000168878 B230307C23RikQ8BLB2 64 aa13.32□□□□□ -0.28
Shroom3-204ENSMUST00000168878 MplkipQ9D011 178 aa13.32□□□□□ -0.28
Shroom3-204ENSMUST00000168878 BB014433Q8C5R5 389 aa13.32□□□□□ -0.28
Shroom3-204ENSMUST00000168878 Gm15294V9GXA7 121 aa13.32□□□□□ -0.28
Shroom3-204ENSMUST00000168878 4930415O20RikQ8CDT5 131 aa13.31□□□□□ -0.28
Shroom3-204ENSMUST00000168878 Trav9d-4A0A0G2JG37 103 aa13.31□□□□□ -0.28
Shroom3-204ENSMUST00000168878 Ighv1-77A0A0G2JGS9 117 aa13.31□□□□□ -0.28
Shroom3-204ENSMUST00000168878 Trbv14A0A140T8L9 115 aa13.31□□□□□ -0.28
Shroom3-204ENSMUST00000168878 Igkv6-13A0A0G2JGY3 119 aa13.31□□□□□ -0.28
Shroom3-204ENSMUST00000168878 Dad1P61804 113 aa13.31□□□□□ -0.28
Shroom3-204ENSMUST00000168878 Myo7bQ99MZ6 2113 aa13.3□□□□□ -0.28
Shroom3-204ENSMUST00000168878 Gm9961Q8BNV2 113 aa13.3□□□□□ -0.28
Shroom3-204ENSMUST00000168878 Igkv4-54A0A0G2JES9 117 aa13.3□□□□□ -0.28
Shroom3-204ENSMUST00000168878 Defa21Q8C1P2 93 aa13.3□□□□□ -0.28
Shroom3-204ENSMUST00000168878 Chchd5Q9CQP3 110 aa13.3□□□□□ -0.28
Shroom3-204ENSMUST00000168878 Igkv4-72A0A0B4J1I4 117 aa13.3□□□□□ -0.28
Shroom3-204ENSMUST00000168878 Cox17P56394 63 aa13.29□□□□□ -0.28
Shroom3-204ENSMUST00000168878 Rmi2Q3UPE3 149 aa13.29□□□□□ -0.28
Shroom3-204ENSMUST00000168878 Gm5941Q497P9 117 aa13.29□□□□□ -0.28
Shroom3-204ENSMUST00000168878 Greb1Q3UHK3 1954 aa13.29□□□□□ -0.28
Shroom3-204ENSMUST00000168878 Gp9O88186 177 aa13.29□□□□□ -0.28
Shroom3-204ENSMUST00000168878 Mapk1ip1lQ8BH93 242 aa13.29□□□□□ -0.28
Shroom3-204ENSMUST00000168878 Spink12Q9D256 87 aa13.29□□□□□ -0.28
Shroom3-204ENSMUST00000168878 Rpl32P62911 135 aaKnown RBP13.29□□□□□ -0.28
Shroom3-204ENSMUST00000168878 Olfr311Q5NC59 308 aa13.29□□□□□ -0.28
Shroom3-204ENSMUST00000168878 Vwa8Q8CC88 1905 aa13.29□□□□□ -0.28
Shroom3-204ENSMUST00000168878 Kif26aQ52KG5 1881 aa13.28□□□□□ -0.28
Shroom3-204ENSMUST00000168878 Pcnx1Q9QYC1 2344 aa13.28□□□□□ -0.28
Shroom3-204ENSMUST00000168878 Sslp1Q3UN54 99 aa13.28□□□□□ -0.28
Shroom3-204ENSMUST00000168878 Fam241bQ9D882 120 aa13.28□□□□□ -0.28
Shroom3-204ENSMUST00000168878 Spag11Q8K4N2 71 aa13.27□□□□□ -0.28
Shroom3-204ENSMUST00000168878 Gm37988J3QM41 62 aa13.27□□□□□ -0.29
Shroom3-204ENSMUST00000168878 P06330 118 aa13.27□□□□□ -0.29
Shroom3-204ENSMUST00000168878 Wfdc11A2A5H7 82 aa13.27□□□□□ -0.29
Shroom3-204ENSMUST00000168878 Cox11Q6P8I6 275 aa13.27□□□□□ -0.29
Shroom3-204ENSMUST00000168878 Jmjd1cQ69ZK6 2350 aa13.27□□□□□ -0.29
Shroom3-204ENSMUST00000168878 P01756 117 aa13.26□□□□□ -0.29
Shroom3-204ENSMUST00000168878 P01757 117 aa13.26□□□□□ -0.29
Shroom3-204ENSMUST00000168878 Ndufa12Q7TMF3 145 aaKnown RBP13.26□□□□□ -0.29
Shroom3-204ENSMUST00000168878 Rnf114Q9ET26 229 aa13.26□□□□□ -0.29
Shroom3-204ENSMUST00000168878 Inafm2A0A1L1STD6 152 aa13.26□□□□□ -0.29
Shroom3-204ENSMUST00000168878 Lgals4Q8K419 326 aa13.26□□□□□ -0.29
Shroom3-204ENSMUST00000168878 MyofQ69ZN7 2048 aaKnown RBP13.25□□□□□ -0.29
Shroom3-204ENSMUST00000168878 P01750 117 aa13.25□□□□□ -0.29
Shroom3-204ENSMUST00000168878 Ociad2Q9D8W7 154 aa13.25□□□□□ -0.29
Shroom3-204ENSMUST00000168878 FancmQ8BGE5 2021 aa13.25□□□□□ -0.29
Shroom3-204ENSMUST00000168878 Tm2d1Q99MB3 208 aa13.24□□□□□ -0.29
Shroom3-204ENSMUST00000168878 Dazap2Q9DCP9 168 aa13.24□□□□□ -0.29
Shroom3-204ENSMUST00000168878 Igkv8-34A0A0G2JDU0 121 aa13.24□□□□□ -0.29
Shroom3-204ENSMUST00000168878 GhrhP16043 103 aa13.24□□□□□ -0.29
Shroom3-204ENSMUST00000168878 Gm9936Q8C864 160 aa13.24□□□□□ -0.29
Shroom3-204ENSMUST00000168878 Spry4Q9WTP2 300 aa13.24□□□□□ -0.29
Shroom3-204ENSMUST00000168878 Igkv4-69A0A0B4J1I6 116 aa13.24□□□□□ -0.29
Shroom3-204ENSMUST00000168878 Hoxd3P09027 433 aa13.24□□□□□ -0.29
Shroom3-204ENSMUST00000168878 BC048562Q80ZQ7 204 aa13.24□□□□□ -0.29
Shroom3-204ENSMUST00000168878 Defb29Q8BGW9 78 aa13.24□□□□□ -0.29
Shroom3-204ENSMUST00000168878 Fam24aQ8CF27 98 aa13.24□□□□□ -0.29
Shroom3-204ENSMUST00000168878 Gm7257D3YX25 99 aa13.23□□□□□ -0.29
Shroom3-204ENSMUST00000168878 Col6a6Q8C6K9 2265 aa13.23□□□□□ -0.29
Shroom3-204ENSMUST00000168878 Gm17324Q8C6J8 137 aa13.23□□□□□ -0.29
Shroom3-204ENSMUST00000168878 Igkv4-79A0A075B5L8 119 aa13.23□□□□□ -0.29
Shroom3-204ENSMUST00000168878 Sp5Q9JHX2 398 aa13.23□□□□□ -0.29
Shroom3-204ENSMUST00000168878 Erdr1J3QMM0 206 aa13.23□□□□□ -0.29
Shroom3-204ENSMUST00000168878 Gm20730A0A075B5J6 119 aa13.22□□□□□ -0.29
Shroom3-204ENSMUST00000168878 SelenowP63300 88 aa13.22□□□□□ -0.29
Shroom3-204ENSMUST00000168878 Ighv1-52A0A0A6YXC3 117 aa13.21□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 46.8 ms