RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Ighv3-1A0A075B5S6 116 aa14.32□□□□□ -0.12
Scaf11-201ENSMUST00000047835 Ndufa4Q62425 82 aaKnown RBP14.32□□□□□ -0.12
Scaf11-201ENSMUST00000047835 Gm9747Q810H1 104 aa14.32□□□□□ -0.12
Scaf11-201ENSMUST00000047835 Wfdc15bQ9JHY4 80 aa14.32□□□□□ -0.12
Scaf11-201ENSMUST00000047835 Ighv1-23A0A0A6YVW3 117 aa14.32□□□□□ -0.12
Scaf11-201ENSMUST00000047835 Hbb-b2P02089 147 aa14.32□□□□□ -0.12
Scaf11-201ENSMUST00000047835 Dennd4cA6H8H2 1906 aa14.32□□□□□ -0.12
Scaf11-201ENSMUST00000047835 Usf3B2RUQ2 2221 aa14.32□□□□□ -0.12
Scaf11-201ENSMUST00000047835 Igkv4-57-1A0A075B5M4 119 aa14.32□□□□□ -0.12
Scaf11-201ENSMUST00000047835 Trav14n-2A0A0G2JDF5 121 aa14.32□□□□□ -0.12
Scaf11-201ENSMUST00000047835 Mrps12O35680 139 aa14.31□□□□□ -0.12
Scaf11-201ENSMUST00000047835 Dmrtc2Q8CGW9 370 aa14.31□□□□□ -0.12
Scaf11-201ENSMUST00000047835 Pfn2Q9JJV2 140 aa14.31□□□□□ -0.12
Scaf11-201ENSMUST00000047835 Greb1Q3UHK3 1954 aa14.31□□□□□ -0.12
Scaf11-201ENSMUST00000047835 Gm20379A0A087WR34 119 aa14.31□□□□□ -0.12
Scaf11-201ENSMUST00000047835 Edn1P22387 202 aa14.31□□□□□ -0.12
Scaf11-201ENSMUST00000047835 Tnrc6aQ3UHK8 1896 aaKnown RBP14.3□□□□□ -0.12
Scaf11-201ENSMUST00000047835 Trav14-3A0A075B607 120 aa14.3□□□□□ -0.12
Scaf11-201ENSMUST00000047835 Mfap4Q9D1H9 257 aa14.3□□□□□ -0.12
Scaf11-201ENSMUST00000047835 Trbv14A0A140T8L9 115 aa14.3□□□□□ -0.12
Scaf11-201ENSMUST00000047835 C730034F03RikQ8BGL5 111 aa14.3□□□□□ -0.12
Scaf11-201ENSMUST00000047835 Dpm2Q9Z324 84 aa14.3□□□□□ -0.12
Scaf11-201ENSMUST00000047835 Defa28D3Z1V9 94 aa14.3□□□□□ -0.12
Scaf11-201ENSMUST00000047835 Gm20517G3UVU6 152 aa14.3□□□□□ -0.12
Scaf11-201ENSMUST00000047835 MturnQ8CGA4 131 aa14.3□□□□□ -0.12
Scaf11-201ENSMUST00000047835 Lyrm9Q3UN90 78 aa14.3□□□□□ -0.12
Scaf11-201ENSMUST00000047835 Trav14d-1A0A075B6B1 121 aa14.29□□□□□ -0.12
Scaf11-201ENSMUST00000047835 Ighv1-12A0A0A6YXJ9 117 aa14.29□□□□□ -0.12
Scaf11-201ENSMUST00000047835 GfyJ3KML8 504 aa14.29□□□□□ -0.12
Scaf11-201ENSMUST00000047835 Cdpf1Q8R3A2 119 aa14.29□□□□□ -0.12
Scaf11-201ENSMUST00000047835 E030018B13RikJ3QMS9 113 aa14.29□□□□□ -0.12
Scaf11-201ENSMUST00000047835 Cd300eQ8K249 196 aa14.29□□□□□ -0.12
Scaf11-201ENSMUST00000047835 Gm5941Q497P9 117 aa14.28□□□□□ -0.12
Scaf11-201ENSMUST00000047835 Anapc13Q8R034 74 aa14.28□□□□□ -0.12
Scaf11-201ENSMUST00000047835 Trav9n-2A0A0G2JDP3 113 aa14.28□□□□□ -0.12
Scaf11-201ENSMUST00000047835 Trav14-2A0A075B694 121 aa14.28□□□□□ -0.12
Scaf11-201ENSMUST00000047835 Igll1P20764 209 aa14.28□□□□□ -0.12
Scaf11-201ENSMUST00000047835 Ighv1-77A0A0G2JGS9 117 aa14.28□□□□□ -0.12
Scaf11-201ENSMUST00000047835 E130218I03RikA0A0U1RNU5 63 aa14.28□□□□□ -0.12
Scaf11-201ENSMUST00000047835 Gm20499D3Z4G5 72 aa14.28□□□□□ -0.12
Scaf11-201ENSMUST00000047835 Fam216aQ9DB54 251 aa14.28□□□□□ -0.12
Scaf11-201ENSMUST00000047835 Tmem14cQ9CQN6 114 aa14.27□□□□□ -0.12
Scaf11-201ENSMUST00000047835 Reg3dQ9QUS9 175 aa14.27□□□□□ -0.12
Scaf11-201ENSMUST00000047835 Gm7102J3QQ10 178 aa14.27□□□□□ -0.12
Scaf11-201ENSMUST00000047835 Slc25a29Q8BL03 306 aa14.27□□□□□ -0.12
Scaf11-201ENSMUST00000047835 Gm10638F6QEG2 257 aa14.27□□□□□ -0.13
Scaf11-201ENSMUST00000047835 P04943 107 aa14.27□□□□□ -0.13
Scaf11-201ENSMUST00000047835 Gm10767Q3TQP0 103 aa14.27□□□□□ -0.13
Scaf11-201ENSMUST00000047835 Cend1Q9JKC6 149 aa14.27□□□□□ -0.13
Scaf11-201ENSMUST00000047835 SNORCQ9CXL7 121 aa14.26□□□□□ -0.13
Scaf11-201ENSMUST00000047835 Bex1Q9R224 128 aa14.26□□□□□ -0.13
Scaf11-201ENSMUST00000047835 Olfr311Q5NC59 308 aa14.26□□□□□ -0.13
Scaf11-201ENSMUST00000047835 Prr12E9PYL2 2035 aaKnown RBP14.26□□□□□ -0.13
Scaf11-201ENSMUST00000047835 Igkv8-16A0A0G2JDG9 121 aa14.26□□□□□ -0.13
Scaf11-201ENSMUST00000047835 Prh1P05142 261 aa14.26□□□□□ -0.13
Scaf11-201ENSMUST00000047835 Tm2d1Q99MB3 208 aa14.26□□□□□ -0.13
Scaf11-201ENSMUST00000047835 Rp1l1Q8CGM2 1859 aa14.26□□□□□ -0.13
Scaf11-201ENSMUST00000047835 Ighv13-2A0A0A6YWN3 119 aa14.26□□□□□ -0.13
Scaf11-201ENSMUST00000047835 Trav9d-3A0A075B695 113 aa14.25□□□□□ -0.13
Scaf11-201ENSMUST00000047835 Igkv2-137A0A0B4J1H6 120 aa14.25□□□□□ -0.13
Scaf11-201ENSMUST00000047835 Olfr312Q7TRZ9 308 aa14.25□□□□□ -0.13
Scaf11-201ENSMUST00000047835 Gm11733Q8BQP1 125 aa14.25□□□□□ -0.13
Scaf11-201ENSMUST00000047835 Heatr5aQ5PRF0 2038 aa14.25□□□□□ -0.13
Scaf11-201ENSMUST00000047835 CrygbP04344 175 aa14.25□□□□□ -0.13
Scaf11-201ENSMUST00000047835 Hoxd3P09027 433 aa14.25□□□□□ -0.13
Scaf11-201ENSMUST00000047835 Il22ra2Q80XF5 230 aa14.24□□□□□ -0.13
Scaf11-201ENSMUST00000047835 Znf672Q99LH4 468 aa14.24□□□□□ -0.13
Scaf11-201ENSMUST00000047835 Notch4P31695 1964 aa14.24□□□□□ -0.13
Scaf11-201ENSMUST00000047835 Dmrtc1c1Q9D410 238 aa14.24□□□□□ -0.13
Scaf11-201ENSMUST00000047835 Gp9O88186 177 aa14.24□□□□□ -0.13
Scaf11-201ENSMUST00000047835 Tdgf1P51865 171 aa14.24□□□□□ -0.13
Scaf11-201ENSMUST00000047835 Bub3Q9WVA3 326 aa14.24□□□□□ -0.13
Scaf11-201ENSMUST00000047835 SrcapA0A087WQ44 3271 aa14.23□□□□□ -0.13
Scaf11-201ENSMUST00000047835 Cited2O35740 269 aa14.23□□□□□ -0.13
Scaf11-201ENSMUST00000047835 Zc2hc1bQ9D534 172 aa14.23□□□□□ -0.13
Scaf11-201ENSMUST00000047835 Tet1Q3URK3 2007 aaKnown RBP14.23□□□□□ -0.13
Scaf11-201ENSMUST00000047835 Ighv12-3A0A075B5T1 117 aa14.23□□□□□ -0.13
Scaf11-201ENSMUST00000047835 SpinklQ8CEK3 90 aa14.23□□□□□ -0.13
Scaf11-201ENSMUST00000047835 Gm15294V9GXA7 121 aa14.23□□□□□ -0.13
Scaf11-201ENSMUST00000047835 March3Q8BRX9 218 aa14.23□□□□□ -0.13
Scaf11-201ENSMUST00000047835 P01794 123 aa14.23□□□□□ -0.13
Scaf11-201ENSMUST00000047835 Gm17455G3UW87 128 aa14.22□□□□□ -0.13
Scaf11-201ENSMUST00000047835 Ighv2-7A0A075B5Q8 116 aa14.22□□□□□ -0.13
Scaf11-201ENSMUST00000047835 Ppp1r32Q148A4 427 aa14.22□□□□□ -0.13
Scaf11-201ENSMUST00000047835 Igkv4-61A0A0G2JH00 117 aa14.22□□□□□ -0.13
Scaf11-201ENSMUST00000047835 PtprsB0V2N1 1907 aa14.22□□□□□ -0.13
Scaf11-201ENSMUST00000047835 Gm6793B2RXM2 351 aa14.22□□□□□ -0.13
Scaf11-201ENSMUST00000047835 F5O88783 2183 aa14.22□□□□□ -0.13
Scaf11-201ENSMUST00000047835 Znf740Q6NZQ6 180 aa14.22□□□□□ -0.13
Scaf11-201ENSMUST00000047835 Lamtor3O88653 124 aa14.21□□□□□ -0.13
Scaf11-201ENSMUST00000047835 Ndufs7Q9DC70 224 aa14.21□□□□□ -0.13
Scaf11-201ENSMUST00000047835 Klk11Q9QYN3 276 aa14.21□□□□□ -0.13
Scaf11-201ENSMUST00000047835 Wisp2Q9Z0G4 251 aa14.21□□□□□ -0.13
Scaf11-201ENSMUST00000047835 Defa26Q3L180 93 aa14.21□□□□□ -0.13
Scaf11-201ENSMUST00000047835 Dopey2Q3UHQ6 2295 aa14.21□□□□□ -0.13
Scaf11-201ENSMUST00000047835 P01658 132 aa14.2□□□□□ -0.14
Scaf11-201ENSMUST00000047835 P01753 117 aa14.2□□□□□ -0.14
Scaf11-201ENSMUST00000047835 Lgals4Q8K419 326 aa14.2□□□□□ -0.14
Scaf11-201ENSMUST00000047835 Gm9925F6T2U3 160 aa14.2□□□□□ -0.14
Scaf11-201ENSMUST00000047835 Ca1P13634 261 aa14.2□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 170.3 ms