RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Col6a6Q8C6K9 2265 aa7.99□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Shisal2aA2A9G7 189 aa7.99□□□□□ -1.13
Ubr1-201ENSMUST00000028728 PpdpfQ9CR37 115 aa7.99□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Cox17P56394 63 aa7.99□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Ang2Q64438 145 aa7.99□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Fstl3Q9EQC7 256 aa7.99□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Tomm7Q9D173 55 aa7.99□□□□□ -1.13
Ubr1-201ENSMUST00000028728 MyofQ69ZN7 2048 aaKnown RBP7.99□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Trav4-3A0A0B4J1K1 110 aa7.99□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Timm17aQ9Z0V8 171 aa7.99□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Gm10192Q3V0S1 108 aa7.99□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Zfp407G3UVV3 2246 aa7.99□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Zfp951A0A087WRH0 451 aa7.98□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Gp9O88186 177 aa7.98□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Usf3B2RUQ2 2221 aa7.98□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Sptan1P16546 2472 aaKnown RBP7.98□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Gm21060J3KMU4 56 aa7.98□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Klk13Q8CGR6 276 aa7.98□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Igkv2-137A0A0B4J1H6 120 aa7.98□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Igkv4-81A0A0G2JEY5 119 aa7.98□□□□□ -1.13
Ubr1-201ENSMUST00000028728 A0A286YE02 88 aa7.98□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Ndufa11Q9D8B4 141 aa7.98□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Ighv1-77A0A0G2JGS9 117 aa7.98□□□□□ -1.13
Ubr1-201ENSMUST00000028728 4930415O20RikQ8CDT5 131 aa7.98□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Q8R092 253 aa7.98□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Igkv4-62A0A0G2JDW9 117 aa7.97□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Edn1P22387 202 aa7.97□□□□□ -1.13
Ubr1-201ENSMUST00000028728 B230104I21RikQ3USW4 141 aa7.97□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Igkv6-13A0A0G2JGY3 119 aa7.97□□□□□ -1.13
Ubr1-201ENSMUST00000028728 P01728 117 aa7.97□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Gm2174F6ZVF2 133 aa7.97□□□□□ -1.13
Ubr1-201ENSMUST00000028728 P04944 107 aa7.97□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Gm5941Q497P9 117 aa7.97□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Zmat4Q8BZ94 229 aa7.97□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Fancd2osQ9D4K4 178 aa7.97□□□□□ -1.13
Ubr1-201ENSMUST00000028728 P04943 107 aa7.97□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Dopey2Q3UHQ6 2295 aa7.97□□□□□ -1.13
Ubr1-201ENSMUST00000028728 P01658 132 aa7.96□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Ang5Q5GAN1 145 aa7.96□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Acyp1P56376 99 aa7.96□□□□□ -1.13
Ubr1-201ENSMUST00000028728 BC048502Q80Y74 154 aa7.96□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Foxi2Q3I5G5 311 aa7.96□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Tcf15Q60756 195 aa7.96□□□□□ -1.14
Ubr1-201ENSMUST00000028728 UrahQ9CRB3 118 aa7.96□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Rp1l1Q8CGM2 1859 aa7.96□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Nxph4G3X9N5 304 aa7.96□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Gm15093A2BI72 449 aa7.96□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Gm15085Q62012 449 aa7.96□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Ptprz1B9EKR1 2312 aa7.96□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Ighv5-9-1A0A0A6YVS4 126 aa7.96□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Ncor2Q9WU42 2472 aaKnown RBP7.95□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Ighv1-64A0A075B5X3 117 aa7.95□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Vsig4F6TUL9 280 aa7.95□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Fhl4Q8CDC8 279 aa7.95□□□□□ -1.14
Ubr1-201ENSMUST00000028728 IgipA0A1B0GR74 53 aa7.95□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Obox8V9GWY9 217 aa7.95□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Gm7075D3Z497 112 aa7.95□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Glrp1E9Q9S8 174 aa7.95□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Mrps12O35680 139 aa7.95□□□□□ -1.14
Ubr1-201ENSMUST00000028728 PtprsB0V2N1 1907 aa7.95□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Cd59aO55186 123 aa7.95□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Rbm3O89086 153 aaKnown RBP7.95□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Ndufa12Q7TMF3 145 aaKnown RBP7.95□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Obsl1D3YYU8 1804 aaKnown RBP7.94□□□□□ -1.14
Ubr1-201ENSMUST00000028728 P04219 140 aa7.94□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Myo7bQ99MZ6 2113 aa7.94□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Gm19410A0A140LJC7 2098 aa7.94□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Defb47Q30KN1 79 aa7.94□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Fam24aQ8CF27 98 aa7.94□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Cox8cA6H666 72 aa7.94□□□□□ -1.14
Ubr1-201ENSMUST00000028728 NpbQ8K4P1 119 aa7.94□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Pcnx1Q9QYC1 2344 aa7.94□□□□□ -1.14
Ubr1-201ENSMUST00000028728 SelenowP63300 88 aa7.94□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Lyzl4Q9D925 145 aa7.94□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Adamts9E9PUN6 1931 aa7.93□□□□□ -1.14
Ubr1-201ENSMUST00000028728 GrnP28798 589 aaKnown RBP7.93□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Prr3Q811B5 190 aaKnown RBP7.93□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Vwa8Q8CC88 1905 aa7.93□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Plxnb3Q9QY40 1902 aa7.93□□□□□ -1.14
Ubr1-201ENSMUST00000028728 LoxP28301 411 aa7.93□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Gm6040Q4QY32 63 aa7.93□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Pfn2Q9JJV2 140 aa7.93□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Igkv4-57-1A0A075B5M4 119 aa7.93□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Lst1O08843 95 aa7.93□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Cnot1Q6ZQ08 2375 aaKnown RBP7.93□□□□□ -1.14
Ubr1-201ENSMUST00000028728 1500011B03RikQ3TTH7 73 aa7.93□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Ighv1-74A0A0G2JGK2 117 aa7.92□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Cfc1P97766 202 aa7.92□□□□□ -1.14
Ubr1-201ENSMUST00000028728 C920008G01RikA0A0B4J1N1 112 aa7.92□□□□□ -1.14
Ubr1-201ENSMUST00000028728 3110021N24RikJ3QMN2 152 aa7.92□□□□□ -1.14
Ubr1-201ENSMUST00000028728 CrygcQ61597 174 aa7.92□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Igkv1-99F6XWB2 120 aa7.92□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Ang4Q3TMQ6 144 aa7.92□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Lrcol1Q3URS3 161 aa7.92□□□□□ -1.14
Ubr1-201ENSMUST00000028728 PemtQ61907 199 aa7.92□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Ighv1-50A0A075B5W1 117 aa7.92□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Trav11A0A0B4J1J9 114 aa7.92□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Pou2af1Q64693 256 aa7.92□□□□□ -1.14
Ubr1-201ENSMUST00000028728 MgamB5THE2 1827 aa7.91□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Rmi2Q3UPE3 149 aa7.91□□□□□ -1.14
Retrieved 100 of 22,080 RNA–protein pairs in 14.4 ms