RNA–Protein interactions for RNA: ENSMUST00000023123.14

Col2a1-201, Transcript of Collagen alpha-1(II) chain, mousemouse

TSL 1 (best) BASIC

Gene Col2a1, Length 5,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-201ENSMUST00000023123 P01630 113 aa12.01□□□□□ -0.49
Col2a1-201ENSMUST00000023123 Oxld1Q9CR10 201 aa12.01□□□□□ -0.49
Col2a1-201ENSMUST00000023123 Trav14d-3-dv8A0A075B619 120 aa12□□□□□ -0.49
Col2a1-201ENSMUST00000023123 E130218I03RikA0A0U1RNU5 63 aa12□□□□□ -0.49
Col2a1-201ENSMUST00000023123 Gm9747Q810H1 104 aa12□□□□□ -0.49
Col2a1-201ENSMUST00000023123 Greb1Q3UHK3 1954 aa12□□□□□ -0.49
Col2a1-201ENSMUST00000023123 Fam241bQ9D882 120 aa12□□□□□ -0.49
Col2a1-201ENSMUST00000023123 Igkv6-13A0A0G2JGY3 119 aa12□□□□□ -0.49
Col2a1-201ENSMUST00000023123 Gvin1Q80SU7 2427 aa12□□□□□ -0.49
Col2a1-201ENSMUST00000023123 Ighv5-9-1A0A0A6YVS4 126 aa11.99□□□□□ -0.49
Col2a1-201ENSMUST00000023123 Gm815Q3UWS2 115 aa11.99□□□□□ -0.49
Col2a1-201ENSMUST00000023123 Fstl3Q9EQC7 256 aa11.99□□□□□ -0.49
Col2a1-201ENSMUST00000023123 Tnfrsf23Q9ER63 176 aa11.99□□□□□ -0.49
Col2a1-201ENSMUST00000023123 3110021N24RikJ3QMN2 152 aa11.99□□□□□ -0.49
Col2a1-201ENSMUST00000023123 P01738 130 aa11.99□□□□□ -0.49
Col2a1-201ENSMUST00000023123 BC048502Q80Y74 154 aa11.99□□□□□ -0.49
Col2a1-201ENSMUST00000023123 Igkv3-2A0A075B5P0 119 aa11.99□□□□□ -0.49
Col2a1-201ENSMUST00000023123 P01786 117 aa11.99□□□□□ -0.49
Col2a1-201ENSMUST00000023123 9930022D16RikQ8BG27 128 aa11.99□□□□□ -0.49
Col2a1-201ENSMUST00000023123 Ighv1-64A0A075B5X3 117 aa11.98□□□□□ -0.49
Col2a1-201ENSMUST00000023123 GhrhP16043 103 aa11.98□□□□□ -0.49
Col2a1-201ENSMUST00000023123 P04942 107 aa11.98□□□□□ -0.49
Col2a1-201ENSMUST00000023123 4930415O20RikQ8CDT5 131 aa11.98□□□□□ -0.49
Col2a1-201ENSMUST00000023123 MplkipQ9D011 178 aa11.98□□□□□ -0.49
Col2a1-201ENSMUST00000023123 Igkv4-59A0A0B4J1I8 117 aa11.98□□□□□ -0.49
Col2a1-201ENSMUST00000023123 CadB2RQC6 2225 aa11.98□□□□□ -0.49
Col2a1-201ENSMUST00000023123 Igkv4-61A0A0G2JH00 117 aa11.98□□□□□ -0.49
Col2a1-201ENSMUST00000023123 Rpl32P62911 135 aaKnown RBP11.98□□□□□ -0.49
Col2a1-201ENSMUST00000023123 NpbQ8K4P1 119 aa11.98□□□□□ -0.49
Col2a1-201ENSMUST00000023123 Q8R092 253 aa11.98□□□□□ -0.49
Col2a1-201ENSMUST00000023123 Cela2aP05208 271 aa11.97□□□□□ -0.49
Col2a1-201ENSMUST00000023123 Tmem52Q9D702 196 aa11.97□□□□□ -0.49
Col2a1-201ENSMUST00000023123 Plxna2P70207 1894 aa11.97□□□□□ -0.49
Col2a1-201ENSMUST00000023123 Mrps12O35680 139 aa11.97□□□□□ -0.49
Col2a1-201ENSMUST00000023123 Edn1P22387 202 aa11.97□□□□□ -0.49
Col2a1-201ENSMUST00000023123 Leap2Q91V13 76 aa11.97□□□□□ -0.49
Col2a1-201ENSMUST00000023123 Tm2d1Q99MB3 208 aa11.97□□□□□ -0.49
Col2a1-201ENSMUST00000023123 Ss18l2Q9D174 77 aa11.97□□□□□ -0.49
Col2a1-201ENSMUST00000023123 Fancd2osQ9D4K4 178 aa11.97□□□□□ -0.49
Col2a1-201ENSMUST00000023123 Nup210lQ9D2F7 1881 aa11.97□□□□□ -0.49
Col2a1-201ENSMUST00000023123 Reg3dQ9QUS9 175 aa11.97□□□□□ -0.49
Col2a1-201ENSMUST00000023123 Obsl1D3YYU8 1804 aaKnown RBP11.96□□□□□ -0.49
Col2a1-201ENSMUST00000023123 Synj2bpQ9D6K5 145 aa11.96□□□□□ -0.49
Col2a1-201ENSMUST00000023123 Ighv1-74A0A0G2JGK2 117 aa11.96□□□□□ -0.49
Col2a1-201ENSMUST00000023123 Notch3Q61982 2318 aa11.96□□□□□ -0.49
Col2a1-201ENSMUST00000023123 Gm9936Q8C864 160 aa11.96□□□□□ -0.5
Col2a1-201ENSMUST00000023123 Spink10Q8CAC8 162 aa11.96□□□□□ -0.5
Col2a1-201ENSMUST00000023123 Cdpf1Q8R3A2 119 aa11.96□□□□□ -0.5
Col2a1-201ENSMUST00000023123 Ighv3-4A0A0A6YXF1 117 aa11.96□□□□□ -0.5
Col2a1-201ENSMUST00000023123 Inafm2A0A1L1STD6 152 aa11.96□□□□□ -0.5
Col2a1-201ENSMUST00000023123 Spink12Q9D256 87 aa11.96□□□□□ -0.5
Col2a1-201ENSMUST00000023123 P01756 117 aa11.95□□□□□ -0.5
Col2a1-201ENSMUST00000023123 P01757 117 aa11.95□□□□□ -0.5
Col2a1-201ENSMUST00000023123 Gm15294V9GXA7 121 aa11.95□□□□□ -0.5
Col2a1-201ENSMUST00000023123 Olfr311Q5NC59 308 aa11.95□□□□□ -0.5
Col2a1-201ENSMUST00000023123 CenpeQ6RT24 2474 aaKnown RBP11.95□□□□□ -0.5
Col2a1-201ENSMUST00000023123 Ndufa12Q7TMF3 145 aaKnown RBP11.95□□□□□ -0.5
Col2a1-201ENSMUST00000023123 LoxP28301 411 aa11.95□□□□□ -0.5
Col2a1-201ENSMUST00000023123 Igkv8-16A0A0G2JDG9 121 aa11.94□□□□□ -0.5
Col2a1-201ENSMUST00000023123 Trav9d-4A0A0G2JG37 103 aa11.94□□□□□ -0.5
Col2a1-201ENSMUST00000023123 Ighv1-77A0A0G2JGS9 117 aa11.94□□□□□ -0.5
Col2a1-201ENSMUST00000023123 Igkv3-9A0A140T8P4 119 aa11.94□□□□□ -0.5
Col2a1-201ENSMUST00000023123 Adamts9E9PUN6 1931 aa11.94□□□□□ -0.5
Col2a1-201ENSMUST00000023123 Nlrc5C3VPR6 1915 aa11.94□□□□□ -0.5
Col2a1-201ENSMUST00000023123 Tmem263Q9DAM7 115 aa11.94□□□□□ -0.5
Col2a1-201ENSMUST00000023123 Zfp951A0A087WRH0 451 aa11.94□□□□□ -0.5
Col2a1-201ENSMUST00000023123 Gp9O88186 177 aa11.93□□□□□ -0.5
Col2a1-201ENSMUST00000023123 Cox17P56394 63 aa11.93□□□□□ -0.5
Col2a1-201ENSMUST00000023123 Rmi2Q3UPE3 149 aa11.93□□□□□ -0.5
Col2a1-201ENSMUST00000023123 Fam24aQ8CF27 98 aa11.93□□□□□ -0.5
Col2a1-201ENSMUST00000023123 Tax1bp3Q9DBG9 124 aa11.93□□□□□ -0.5
Col2a1-201ENSMUST00000023123 Trbv14A0A140T8L9 115 aa11.93□□□□□ -0.5
Col2a1-201ENSMUST00000023123 Ighv1-50A0A075B5W1 117 aa11.93□□□□□ -0.5
Col2a1-201ENSMUST00000023123 Igkv4-72A0A0B4J1I4 117 aa11.93□□□□□ -0.5
Col2a1-201ENSMUST00000023123 Igkv4-54A0A0G2JES9 117 aa11.93□□□□□ -0.5
Col2a1-201ENSMUST00000023123 Ighv5-8A0A075B676 92 aa11.92□□□□□ -0.5
Col2a1-201ENSMUST00000023123 P01739 132 aa11.92□□□□□ -0.5
Col2a1-201ENSMUST00000023123 Rbmy1bQ60990 380 aa11.92□□□□□ -0.5
Col2a1-201ENSMUST00000023123 Defb26Q30KN7 186 aa11.92□□□□□ -0.5
Col2a1-201ENSMUST00000023123 Gm5941Q497P9 117 aa11.92□□□□□ -0.5
Col2a1-201ENSMUST00000023123 Zc2hc1aQ8BJH1 324 aa11.92□□□□□ -0.5
Col2a1-201ENSMUST00000023123 Eml5Q8BQM8 1977 aa11.92□□□□□ -0.5
Col2a1-201ENSMUST00000023123 Iglc1A0A0G2JE99 106 aa11.92□□□□□ -0.5
Col2a1-201ENSMUST00000023123 Tmem243B2RVB9 118 aa11.92□□□□□ -0.5
Col2a1-201ENSMUST00000023123 P01843 105 aa11.92□□□□□ -0.5
Col2a1-201ENSMUST00000023123 Kif26aQ52KG5 1881 aa11.92□□□□□ -0.5
Col2a1-201ENSMUST00000023123 MylkQ6PDN3 1941 aaKnown RBP11.92□□□□□ -0.5
Col2a1-201ENSMUST00000023123 Defb29Q8BGW9 78 aa11.91□□□□□ -0.5
Col2a1-201ENSMUST00000023123 SelenowP63300 88 aa11.91□□□□□ -0.5
Col2a1-201ENSMUST00000023123 Smim10l1A0A087WNQ7 89 aa11.91□□□□□ -0.5
Col2a1-201ENSMUST00000023123 Heatr5aQ5PRF0 2038 aa11.91□□□□□ -0.5
Col2a1-201ENSMUST00000023123 Gm9970F6ZED4 185 aa11.9□□□□□ -0.5
Col2a1-201ENSMUST00000023123 Nxph4G3X9N5 304 aa11.9□□□□□ -0.5
Col2a1-201ENSMUST00000023123 Reg3gO09049 174 aa11.9□□□□□ -0.5
Col2a1-201ENSMUST00000023123 Defb47Q30KN1 79 aa11.9□□□□□ -0.5
Col2a1-201ENSMUST00000023123 Hoxd3P09027 433 aa11.9□□□□□ -0.5
Col2a1-201ENSMUST00000023123 Ighv1-4A0A075B5T4 117 aa11.89□□□□□ -0.51
Col2a1-201ENSMUST00000023123 NpyP57774 97 aa11.89□□□□□ -0.51
Col2a1-201ENSMUST00000023123 Foxi2Q3I5G5 311 aa11.89□□□□□ -0.51
Col2a1-201ENSMUST00000023123 Tmem210Q9D2F0 147 aa11.89□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 979.8 ms