RNA–Protein interactions for RNA: ENSMUST00000005600.5

Rfx1-201, Transcript of MHC class II regulatory factor RFX1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rfx1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1-201ENSMUST00000005600 Prrc2cQ3TLH4 2846 aaKnown RBP9.24□□□□□ -0.93
Rfx1-201ENSMUST00000005600 Igkv4-90A0A075B5L3 117 aa9.24□□□□□ -0.93
Rfx1-201ENSMUST00000005600 Iglc1A0A0G2JE99 106 aa9.24□□□□□ -0.93
Rfx1-201ENSMUST00000005600 P01843 105 aa9.24□□□□□ -0.93
Rfx1-201ENSMUST00000005600 Trav7-2Q5R1I3 112 aa9.24□□□□□ -0.93
Rfx1-201ENSMUST00000005600 Ighv1-22A0A075B5U7 117 aa9.24□□□□□ -0.93
Rfx1-201ENSMUST00000005600 Zfand3Q497H0 227 aa9.24□□□□□ -0.93
Rfx1-201ENSMUST00000005600 Chd8Q09XV5 2582 aaKnown RBP9.24□□□□□ -0.93
Rfx1-201ENSMUST00000005600 Ighv1-4A0A075B5T4 117 aa9.23□□□□□ -0.93
Rfx1-201ENSMUST00000005600 P01741 114 aa9.23□□□□□ -0.93
Rfx1-201ENSMUST00000005600 Gm5464Q3UY29 175 aa9.23□□□□□ -0.93
Rfx1-201ENSMUST00000005600 Olfr312Q7TRZ9 308 aa9.23□□□□□ -0.93
Rfx1-201ENSMUST00000005600 Mrpl36Q99N90 102 aa9.23□□□□□ -0.93
Rfx1-201ENSMUST00000005600 Q9CX25 107 aa9.23□□□□□ -0.93
Rfx1-201ENSMUST00000005600 Q9CX63 252 aa9.23□□□□□ -0.93
Rfx1-201ENSMUST00000005600 Dnajb12Q9QYI4 376 aaKnown RBP9.23□□□□□ -0.93
Rfx1-201ENSMUST00000005600 Ighv1-53A0A075B5W3 117 aa9.23□□□□□ -0.93
Rfx1-201ENSMUST00000005600 Wfdc11A2A5H7 82 aa9.23□□□□□ -0.93
Rfx1-201ENSMUST00000005600 Trav2Q5R1I9 109 aa9.23□□□□□ -0.93
Rfx1-201ENSMUST00000005600 Ndufa4Q62425 82 aaKnown RBP9.23□□□□□ -0.93
Rfx1-201ENSMUST00000005600 Crip3Q6Q6R3 243 aa9.23□□□□□ -0.93
Rfx1-201ENSMUST00000005600 Anapc13Q8R034 74 aa9.23□□□□□ -0.93
Rfx1-201ENSMUST00000005600 Tcf24V9GWT9 166 aa9.23□□□□□ -0.93
Rfx1-201ENSMUST00000005600 Ighv3-1A0A075B5S6 116 aa9.23□□□□□ -0.93
Rfx1-201ENSMUST00000005600 Ighv1-62-3P01754 117 aa9.23□□□□□ -0.93
Rfx1-201ENSMUST00000005600 P01725 110 aa9.23□□□□□ -0.93
Rfx1-201ENSMUST00000005600 Wfdc15bQ9JHY4 80 aa9.23□□□□□ -0.93
Rfx1-201ENSMUST00000005600 Clec5aQ9R007 190 aa9.23□□□□□ -0.93
Rfx1-201ENSMUST00000005600 Rs1Q9Z1L4 224 aa9.23□□□□□ -0.93
Rfx1-201ENSMUST00000005600 ApomQ9Z1R3 190 aa9.23□□□□□ -0.93
Rfx1-201ENSMUST00000005600 Gm5878E9PUB3 99 aa9.22□□□□□ -0.93
Rfx1-201ENSMUST00000005600 P01724 129 aa9.22□□□□□ -0.93
Rfx1-201ENSMUST00000005600 P01727 129 aa9.22□□□□□ -0.93
Rfx1-201ENSMUST00000005600 Sumo2P61957 95 aaKnown RBP9.22□□□□□ -0.93
Rfx1-201ENSMUST00000005600 Zfp248Q640N4 576 aa9.22□□□□□ -0.93
Rfx1-201ENSMUST00000005600 Nhlrc1Q8BR37 401 aa9.22□□□□□ -0.93
Rfx1-201ENSMUST00000005600 Gm14137Q8CE97 175 aa9.22□□□□□ -0.93
Rfx1-201ENSMUST00000005600 Mustn1Q99JI1 82 aa9.22□□□□□ -0.93
Rfx1-201ENSMUST00000005600 Cryba4Q9JJV0 196 aa9.22□□□□□ -0.93
Rfx1-201ENSMUST00000005600 Trav3-1Q5R1I8 114 aa9.22□□□□□ -0.93
Rfx1-201ENSMUST00000005600 Gm12845A0A0N4SUM5 588 aa9.21□□□□□ -0.93
Rfx1-201ENSMUST00000005600 PolP10400 120 aa9.21□□□□□ -0.93
Rfx1-201ENSMUST00000005600 Tmem14cQ9CQN6 114 aa9.21□□□□□ -0.93
Rfx1-201ENSMUST00000005600 Plac1Q9JI83 173 aa9.21□□□□□ -0.93
Rfx1-201ENSMUST00000005600 Pla2g2dQ9WVF6 144 aa9.21□□□□□ -0.93
Rfx1-201ENSMUST00000005600 Ighv3-4A0A0A6YXF1 117 aa9.21□□□□□ -0.94
Rfx1-201ENSMUST00000005600 Igkv4-59A0A0B4J1I8 117 aa9.21□□□□□ -0.94
Rfx1-201ENSMUST00000005600 4930447F04RikA2AFR2 126 aa9.21□□□□□ -0.94
Rfx1-201ENSMUST00000005600 Cox8cA6H666 72 aa9.21□□□□□ -0.94
Rfx1-201ENSMUST00000005600 Ccl25O35903 144 aa9.21□□□□□ -0.94
Rfx1-201ENSMUST00000005600 A130051J06RikQ8CAU1 227 aa9.21□□□□□ -0.94
Rfx1-201ENSMUST00000005600 Srsf9Q9D0B0 222 aaKnown RBP9.21□□□□□ -0.94
Rfx1-201ENSMUST00000005600 Pgpep1Q9ESW8 209 aa9.21□□□□□ -0.94
Rfx1-201ENSMUST00000005600 Q4KKZ1 196 aa9.2□□□□□ -0.94
Rfx1-201ENSMUST00000005600 Nbl1Q61477 178 aa9.2□□□□□ -0.94
Rfx1-201ENSMUST00000005600 Tmem30bQ8BHG3 353 aa9.2□□□□□ -0.94
Rfx1-201ENSMUST00000005600 Uqcrfs1Q9CR68 274 aa9.2□□□□□ -0.94
Rfx1-201ENSMUST00000005600 Gm3285A0A1W2P7U0 201 aa9.2□□□□□ -0.94
Rfx1-201ENSMUST00000005600 Pradc1Q9D9N8 188 aa9.2□□□□□ -0.94
Rfx1-201ENSMUST00000005600 HilpdaQ9JLS0 64 aa9.2□□□□□ -0.94
Rfx1-201ENSMUST00000005600 Zzef1Q5SSH7 2924 aa9.2□□□□□ -0.94
Rfx1-201ENSMUST00000005600 Ighv1-74A0A0G2JGK2 117 aa9.2□□□□□ -0.94
Rfx1-201ENSMUST00000005600 Gm45717A0A1B0GT68 152 aa9.2□□□□□ -0.94
Rfx1-201ENSMUST00000005600 Smim1P0C8K7 78 aa9.2□□□□□ -0.94
Rfx1-201ENSMUST00000005600 Gm21370Q3T9V6 190 aa9.2□□□□□ -0.94
Rfx1-201ENSMUST00000005600 Qrich2A0A140LIY9 2337 aa9.2□□□□□ -0.94
Rfx1-201ENSMUST00000005600 Igkv20-101-2A0A0G2JDU3 113 aa9.2□□□□□ -0.94
Rfx1-201ENSMUST00000005600 P18527 97 aa9.2□□□□□ -0.94
Rfx1-201ENSMUST00000005600 SonQ9QX47 2444 aaKnown RBP9.19□□□□□ -0.94
Rfx1-201ENSMUST00000005600 Ighv1-9A0A0A6YW37 117 aa9.19□□□□□ -0.94
Rfx1-201ENSMUST00000005600 NrepQ07475 68 aa9.19□□□□□ -0.94
Rfx1-201ENSMUST00000005600 Tex26Q0VB26 296 aa9.19□□□□□ -0.94
Rfx1-201ENSMUST00000005600 Cxcl14Q9WUQ5 99 aa9.19□□□□□ -0.94
Rfx1-201ENSMUST00000005600 1700056E22RikF7CNM6 234 aa9.19□□□□□ -0.94
Rfx1-201ENSMUST00000005600 Tcrg-C3L7N479 172 aa9.19□□□□□ -0.94
Rfx1-201ENSMUST00000005600 P03985 172 aa9.19□□□□□ -0.94
Rfx1-201ENSMUST00000005600 Pgpep1lQ9CWB5 130 aa9.19□□□□□ -0.94
Rfx1-201ENSMUST00000005600 Lgals6O54891 301 aa9.19□□□□□ -0.94
Rfx1-201ENSMUST00000005600 E130116L18RikQ8BMV6 101 aa9.19□□□□□ -0.94
Rfx1-201ENSMUST00000005600 Arl3Q9WUL7 182 aa9.19□□□□□ -0.94
Rfx1-201ENSMUST00000005600 Sdk1Q3UH53 2193 aa9.19□□□□□ -0.94
Rfx1-201ENSMUST00000005600 Rpl36-ps4A0A140T8U4 117 aa9.18□□□□□ -0.94
Rfx1-201ENSMUST00000005600 Wipf1Q8K1I7 493 aa9.18□□□□□ -0.94
Rfx1-201ENSMUST00000005600 Rasl11bQ922H7 247 aa9.18□□□□□ -0.94
Rfx1-201ENSMUST00000005600 Ube2e1P52482 193 aa9.18□□□□□ -0.94
Rfx1-201ENSMUST00000005600 Sdhaf1Q3U276 118 aa9.18□□□□□ -0.94
Rfx1-201ENSMUST00000005600 Ang5Q5GAN1 145 aa9.18□□□□□ -0.94
Rfx1-201ENSMUST00000005600 Prss41Q920S2 322 aa9.18□□□□□ -0.94
Rfx1-201ENSMUST00000005600 Ighv1-80A0A075B5Y3 117 aa9.18□□□□□ -0.94
Rfx1-201ENSMUST00000005600 P01837 106 aa9.18□□□□□ -0.94
Rfx1-201ENSMUST00000005600 Tctex1d4Q8CDY7 219 aa9.18□□□□□ -0.94
Rfx1-201ENSMUST00000005600 Tmem219Q9D123 240 aa9.18□□□□□ -0.94
Rfx1-201ENSMUST00000005600 Dopey2Q3UHQ6 2295 aa9.18□□□□□ -0.94
Rfx1-201ENSMUST00000005600 Gm9970F6ZED4 185 aa9.17□□□□□ -0.94
Rfx1-201ENSMUST00000005600 Egr1P08046 533 aa9.17□□□□□ -0.94
Rfx1-201ENSMUST00000005600 TshbP12656 138 aa9.17□□□□□ -0.94
Rfx1-201ENSMUST00000005600 Fhl1P97447 280 aaKnown RBP9.17□□□□□ -0.94
Rfx1-201ENSMUST00000005600 Gm17334Q8C6U3 126 aa9.17□□□□□ -0.94
Rfx1-201ENSMUST00000005600 Gm16223Q8CBM3 117 aa9.17□□□□□ -0.94
Rfx1-201ENSMUST00000005600 Dpm3Q9D1Q4 92 aa9.17□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 50.4 ms