RNA–Protein interactions for RNA: ENST00000640969.1

KCNMA1-293, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,789 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-293ENST00000640969 KMT2CQ8NEZ4 4911 aaKnown RBP5.84□□□□□ -1.47
KCNMA1-293ENST00000640969 PKHD1P08F94 4074 aa5.82□□□□□ -1.48
KCNMA1-293ENST00000640969 TNXBP22105 4242 aa5.81□□□□□ -1.48
KCNMA1-293ENST00000640969 FLGP20930 4061 aaPredicted RBP5.81□□□□□ -1.48
KCNMA1-293ENST00000640969 MUC17Q685J3 4493 aa5.76□□□□□ -1.49
KCNMA1-293ENST00000640969 ABCA13Q86UQ4 5058 aa5.73□□□□□ -1.49
KCNMA1-293ENST00000640969 MT1AP04731 61 aa5.69□□□□□ -1.5
KCNMA1-293ENST00000640969 KRTAP4-9Q9BYQ8 210 aa5.67□□□□□ -1.5
KCNMA1-293ENST00000640969 KRTAP9-2Q9BYQ4 174 aa5.65□□□□□ -1.5
KCNMA1-293ENST00000640969 SYNE1Q8NF91 8797 aaKnown RBP5.64□□□□□ -1.51
KCNMA1-293ENST00000640969 KRTAP19-7Q3SYF9 63 aa5.64□□□□□ -1.51
KCNMA1-293ENST00000640969 KRTAP2-3P0C7H8 128 aa5.6□□□□□ -1.51
KCNMA1-293ENST00000640969 KRTAP2-4Q9BYR9 128 aa5.6□□□□□ -1.51
KCNMA1-293ENST00000640969 KRTAP2-1Q9BYU5 128 aa5.6□□□□□ -1.51
KCNMA1-293ENST00000640969 UBR4Q5T4S7 5183 aa5.59□□□□□ -1.52
KCNMA1-293ENST00000640969 LCE5AQ5TCM9 118 aa5.53□□□□□ -1.52
KCNMA1-293ENST00000640969 LCE2AQ5TA79 106 aaPredicted RBP5.47□□□□□ -1.53
KCNMA1-293ENST00000640969 RNF213Q63HN8 5207 aa5.42□□□□□ -1.54
KCNMA1-293ENST00000640969 FAT4Q6V0I7 4981 aa5.4□□□□□ -1.54
KCNMA1-293ENST00000640969 FSIP2Q5CZC0 6907 aa5.39□□□□□ -1.55
KCNMA1-293ENST00000640969 KRTAP6-2Q3LI66 62 aa5.35□□□□□ -1.55
KCNMA1-293ENST00000640969 KRTAP6-1Q3LI64 71 aa5.33□□□□□ -1.56
KCNMA1-293ENST00000640969 KRTAP9-6A0A140TA67 174 aa5.31□□□□□ -1.56
KCNMA1-293ENST00000640969 KRTAP20-1Q3LI63 56 aa5.29□□□□□ -1.56
KCNMA1-293ENST00000640969 HMCN2Q8NDA2 5059 aa5.27□□□□□ -1.57
KCNMA1-293ENST00000640969 KRTAP9-4Q9BYQ2 154 aa5.25□□□□□ -1.57
KCNMA1-293ENST00000640969 SYNE2Q8WXH0 6885 aaKnown RBP5.24□□□□□ -1.57
KCNMA1-293ENST00000640969 KRTAP9-6A8MVA2 160 aa5.22□□□□□ -1.57
KCNMA1-293ENST00000640969 LCE1AQ5T7P2 110 aa5.19□□□□□ -1.58
KCNMA1-293ENST00000640969 MUC2Q02817 5179 aa5.18□□□□□ -1.58
KCNMA1-293ENST00000640969 KRTAP9-7A8MTY7 169 aa5.11□□□□□ -1.59
KCNMA1-293ENST00000640969 KRTAP6-3Q3LI67 103 aa5.1□□□□□ -1.59
KCNMA1-293ENST00000640969 LCE1CQ5T751 118 aa5.08□□□□□ -1.6
KCNMA1-293ENST00000640969 LCE1EQ5T753 118 aa5.08□□□□□ -1.6
KCNMA1-293ENST00000640969 LCE1FQ5T754 118 aa5.08□□□□□ -1.6
KCNMA1-293ENST00000640969 LCE4AQ5TA78 99 aa5.07□□□□□ -1.6
KCNMA1-293ENST00000640969 OBSCNQ5VST9 7968 aa5□□□□□ -1.61
KCNMA1-293ENST00000640969 KRTAP2-2Q9BYT5 123 aa4.88□□□□□ -1.63
KCNMA1-293ENST00000640969 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.86□□□□□ -1.63
KCNMA1-293ENST00000640969 USH2AO75445 5202 aa4.63□□□□□ -1.67
KCNMA1-293ENST00000640969 FCGBPQ9Y6R7 5405 aaPredicted RBP4.56□□□□□ -1.68
KCNMA1-293ENST00000640969 DSTQ03001 7570 aaKnown RBP4.54□□□□□ -1.68
KCNMA1-293ENST00000640969 KRTAP9-9Q9BYP9 154 aa4.53□□□□□ -1.68
KCNMA1-293ENST00000640969 KRTAP4-11Q9BYQ6 195 aa4.5□□□□□ -1.69
KCNMA1-293ENST00000640969 MACF1Q9UPN3 7388 aaKnown RBP4.45□□□□□ -1.7
KCNMA1-293ENST00000640969 KMT2DO14686 5537 aa4.41□□□□□ -1.7
KCNMA1-293ENST00000640969 KRTAP4-6Q9BYQ5 205 aa4.27□□□□□ -1.73
KCNMA1-293ENST00000640969 KRTAP5-9P26371 169 aa4.27□□□□□ -1.73
KCNMA1-293ENST00000640969 KRTAP20-2Q3LI61 65 aa4.2□□□□□ -1.74
KCNMA1-293ENST00000640969 NEBP20929 6669 aa4.2□□□□□ -1.74
KCNMA1-293ENST00000640969 MDN1Q9NU22 5596 aa4.18□□□□□ -1.74
KCNMA1-293ENST00000640969 SSPOA2VEC9 5147 aa4.13□□□□□ -1.75
KCNMA1-293ENST00000640969 KRTAP4-4Q9BYR3 166 aa4.13□□□□□ -1.75
KCNMA1-293ENST00000640969 GPR98Q8WXG9 6306 aa4.07□□□□□ -1.76
KCNMA1-293ENST00000640969 MUC12Q9UKN1 5478 aa4.05□□□□□ -1.76
KCNMA1-293ENST00000640969 MUC19Q7Z5P9 8384 aa4.02□□□□□ -1.77
KCNMA1-293ENST00000640969 KRTAP4-12Q9BQ66 201 aa4.01□□□□□ -1.77
KCNMA1-293ENST00000640969 KRTAP4-2Q9BYR5 136 aa4.01□□□□□ -1.77
KCNMA1-293ENST00000640969 KRTAP5-5Q701N2 237 aaPredicted RBP3.92□□□□□ -1.78
KCNMA1-293ENST00000640969 KRTAP5-4Q6L8H1 288 aa3.86□□□□□ -1.79
KCNMA1-293ENST00000640969 MUC5ACP98088 5654 aa3.37□□□□□ -1.87
KCNMA1-293ENST00000640969 KRTAP5-3Q6L8H2 238 aa3.35□□□□□ -1.87
KCNMA1-293ENST00000640969 HMCN1Q96RW7 5635 aa3.29□□□□□ -1.88
KCNMA1-293ENST00000640969 AHNAK2Q8IVF2 5795 aa3.29□□□□□ -1.88
KCNMA1-293ENST00000640969 KRTAP5-10Q6L8G5 202 aa3.1□□□□□ -1.91
KCNMA1-293ENST00000640969 KRTAP5-8O75690 187 aa3.05□□□□□ -1.92
KCNMA1-293ENST00000640969 PHGR1C9JFL3 82 aa2.93□□□□□ -1.94
KCNMA1-293ENST00000640969 KRTAP5-2Q701N4 177 aa2.92□□□□□ -1.94
KCNMA1-293ENST00000640969 MUC5BQ9HC84 5762 aaPredicted RBP2.83□□□□□ -1.96
KCNMA1-293ENST00000640969 KRTAP5-1Q6L8H4 278 aa2.76□□□□□ -1.97
KCNMA1-293ENST00000640969 AHNAKQ09666 5890 aaKnown RBP2.74□□□□□ -1.97
KCNMA1-293ENST00000640969 KRTAP5-11Q6L8G4 156 aa2.68□□□□□ -1.98
KCNMA1-293ENST00000640969 KRTAP21-2Q3LI59 83 aa2.56□□□□□ -2
KCNMA1-293ENST00000640969 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
KCNMA1-293ENST00000640969 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.32□□□□□ -2.04
KCNMA1-293ENST00000640969 KRTAP5-7Q6L8G8 165 aa2.23□□□□□ -2.05
KCNMA1-293ENST00000640969 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 73.4 ms