RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 LCE2DQ5TA82 110 aaPredicted RBP5.59□□□□□ -1.51
SCARB2-213ENST00000638680 MT4P47944 62 aa5.47□□□□□ -1.53
SCARB2-213ENST00000638680 KRTAP19-6Q3LI70 58 aa5.46□□□□□ -1.54
SCARB2-213ENST00000638680 KRTAP19-7Q3SYF9 63 aa5.42□□□□□ -1.54
SCARB2-213ENST00000638680 KRTAP2-3P0C7H8 128 aa5.39□□□□□ -1.55
SCARB2-213ENST00000638680 KRTAP2-4Q9BYR9 128 aa5.39□□□□□ -1.55
SCARB2-213ENST00000638680 KRTAP2-1Q9BYU5 128 aa5.39□□□□□ -1.55
SCARB2-213ENST00000638680 KRTAP4-9Q9BYQ8 210 aa5.38□□□□□ -1.55
SCARB2-213ENST00000638680 EPPK1P58107 5090 aaKnown RBP5.37□□□□□ -1.55
SCARB2-213ENST00000638680 LCE1BQ5T7P3 118 aa5.36□□□□□ -1.55
SCARB2-213ENST00000638680 ABCA13Q86UQ4 5058 aa5.36□□□□□ -1.55
SCARB2-213ENST00000638680 LCE1DQ5T752 114 aa5.33□□□□□ -1.56
SCARB2-213ENST00000638680 MT1AP04731 61 aa5.31□□□□□ -1.56
SCARB2-213ENST00000638680 HMCN2Q8NDA2 5059 aa5.26□□□□□ -1.57
SCARB2-213ENST00000638680 FAT4Q6V0I7 4981 aa5.2□□□□□ -1.58
SCARB2-213ENST00000638680 RNF213Q63HN8 5207 aa5.16□□□□□ -1.58
SCARB2-213ENST00000638680 UBR4Q5T4S7 5183 aa5.15□□□□□ -1.59
SCARB2-213ENST00000638680 KRTAP9-6A8MVA2 160 aa5.14□□□□□ -1.59
SCARB2-213ENST00000638680 KRTAP9-2Q9BYQ4 174 aa5.12□□□□□ -1.59
SCARB2-213ENST00000638680 SYNE1Q8NF91 8797 aaKnown RBP5.12□□□□□ -1.59
SCARB2-213ENST00000638680 LCE2AQ5TA79 106 aaPredicted RBP5.09□□□□□ -1.59
SCARB2-213ENST00000638680 FSIP2Q5CZC0 6907 aa5.07□□□□□ -1.6
SCARB2-213ENST00000638680 KRTAP6-1Q3LI64 71 aa5.04□□□□□ -1.6
SCARB2-213ENST00000638680 KRTAP6-2Q3LI66 62 aa5.04□□□□□ -1.6
SCARB2-213ENST00000638680 SYNE2Q8WXH0 6885 aaKnown RBP5.03□□□□□ -1.6
SCARB2-213ENST00000638680 LCE5AQ5TCM9 118 aa4.96□□□□□ -1.62
SCARB2-213ENST00000638680 MUC2Q02817 5179 aa4.92□□□□□ -1.62
SCARB2-213ENST00000638680 KRTAP9-4Q9BYQ2 154 aa4.91□□□□□ -1.62
SCARB2-213ENST00000638680 KRTAP9-7A8MTY7 169 aa4.89□□□□□ -1.63
SCARB2-213ENST00000638680 KRTAP9-6A0A140TA67 174 aa4.84□□□□□ -1.63
SCARB2-213ENST00000638680 OBSCNQ5VST9 7968 aa4.8□□□□□ -1.64
SCARB2-213ENST00000638680 KRTAP20-1Q3LI63 56 aa4.79□□□□□ -1.64
SCARB2-213ENST00000638680 LCE1AQ5T7P2 110 aa4.78□□□□□ -1.64
SCARB2-213ENST00000638680 KRTAP6-3Q3LI67 103 aa4.63□□□□□ -1.67
SCARB2-213ENST00000638680 LCE4AQ5TA78 99 aa4.59□□□□□ -1.67
SCARB2-213ENST00000638680 LCE1CQ5T751 118 aa4.57□□□□□ -1.68
SCARB2-213ENST00000638680 LCE1EQ5T753 118 aa4.57□□□□□ -1.68
SCARB2-213ENST00000638680 LCE1FQ5T754 118 aa4.57□□□□□ -1.68
SCARB2-213ENST00000638680 KRTAP2-2Q9BYT5 123 aa4.48□□□□□ -1.69
SCARB2-213ENST00000638680 FCGBPQ9Y6R7 5405 aaPredicted RBP4.46□□□□□ -1.7
SCARB2-213ENST00000638680 USH2AO75445 5202 aa4.45□□□□□ -1.7
SCARB2-213ENST00000638680 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.42□□□□□ -1.7
SCARB2-213ENST00000638680 KMT2DO14686 5537 aa4.36□□□□□ -1.71
SCARB2-213ENST00000638680 KRTAP4-11Q9BYQ6 195 aa4.23□□□□□ -1.73
SCARB2-213ENST00000638680 DSTQ03001 7570 aaKnown RBP4.16□□□□□ -1.74
SCARB2-213ENST00000638680 KRTAP9-9Q9BYP9 154 aa4.1□□□□□ -1.75
SCARB2-213ENST00000638680 SSPOA2VEC9 5147 aa4.09□□□□□ -1.76
SCARB2-213ENST00000638680 MACF1Q9UPN3 7388 aaKnown RBP4.04□□□□□ -1.76
SCARB2-213ENST00000638680 KRTAP4-6Q9BYQ5 205 aa4.01□□□□□ -1.77
SCARB2-213ENST00000638680 KRTAP5-9P26371 169 aa3.96□□□□□ -1.77
SCARB2-213ENST00000638680 KRTAP20-2Q3LI61 65 aa3.92□□□□□ -1.78
SCARB2-213ENST00000638680 MUC12Q9UKN1 5478 aa3.9□□□□□ -1.78
SCARB2-213ENST00000638680 KRTAP5-5Q701N2 237 aaPredicted RBP3.88□□□□□ -1.79
SCARB2-213ENST00000638680 NEBP20929 6669 aa3.88□□□□□ -1.79
SCARB2-213ENST00000638680 KRTAP4-4Q9BYR3 166 aa3.82□□□□□ -1.8
SCARB2-213ENST00000638680 MUC19Q7Z5P9 8384 aa3.74□□□□□ -1.81
SCARB2-213ENST00000638680 KRTAP4-12Q9BQ66 201 aa3.66□□□□□ -1.82
SCARB2-213ENST00000638680 KRTAP4-2Q9BYR5 136 aa3.66□□□□□ -1.82
SCARB2-213ENST00000638680 KRTAP5-4Q6L8H1 288 aa3.57□□□□□ -1.84
SCARB2-213ENST00000638680 MDN1Q9NU22 5596 aa3.57□□□□□ -1.84
SCARB2-213ENST00000638680 GPR98Q8WXG9 6306 aa3.2□□□□□ -1.9
SCARB2-213ENST00000638680 MUC5ACP98088 5654 aa3.19□□□□□ -1.9
SCARB2-213ENST00000638680 KRTAP5-3Q6L8H2 238 aa3.1□□□□□ -1.91
SCARB2-213ENST00000638680 KRTAP5-10Q6L8G5 202 aa3.02□□□□□ -1.93
SCARB2-213ENST00000638680 HMCN1Q96RW7 5635 aa2.97□□□□□ -1.93
SCARB2-213ENST00000638680 KRTAP5-8O75690 187 aa2.83□□□□□ -1.96
SCARB2-213ENST00000638680 KRTAP5-2Q701N4 177 aa2.78□□□□□ -1.96
SCARB2-213ENST00000638680 AHNAK2Q8IVF2 5795 aa2.72□□□□□ -1.97
SCARB2-213ENST00000638680 MUC5BQ9HC84 5762 aaPredicted RBP2.66□□□□□ -1.98
SCARB2-213ENST00000638680 PHGR1C9JFL3 82 aa2.66□□□□□ -1.98
SCARB2-213ENST00000638680 KRTAP5-1Q6L8H4 278 aa2.65□□□□□ -1.98
SCARB2-213ENST00000638680 KRTAP5-11Q6L8G4 156 aa2.54□□□□□ -2
SCARB2-213ENST00000638680 KRTAP21-2Q3LI59 83 aa2.51□□□□□ -2.01
SCARB2-213ENST00000638680 KRTAP21-1Q3LI58 79 aa2.45□□□□□ -2.02
SCARB2-213ENST00000638680 AHNAKQ09666 5890 aaKnown RBP2.39□□□□□ -2.03
SCARB2-213ENST00000638680 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.23□□□□□ -2.05
SCARB2-213ENST00000638680 KRTAP5-7Q6L8G8 165 aa2□□□□□ -2.09
SCARB2-213ENST00000638680 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 90.6 ms