RNA–Protein interactions for RNA: ENST00000636662.2

SCN2A-212, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 9,456 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-212ENST00000636662 KRTAP19-2Q3LHN2 52 aa1.65□□□□□ -2.15
SCN2A-212ENST00000636662 KRTAP9-2Q9BYQ4 174 aa1.65□□□□□ -2.15
SCN2A-212ENST00000636662 FAT3Q8TDW7 4589 aa1.64□□□□□ -2.15
SCN2A-212ENST00000636662 UBR4Q5T4S7 5183 aa1.63□□□□□ -2.15
SCN2A-212ENST00000636662 LCE1CQ5T751 118 aa1.63□□□□□ -2.15
SCN2A-212ENST00000636662 LCE1EQ5T753 118 aa1.63□□□□□ -2.15
SCN2A-212ENST00000636662 LCE1FQ5T754 118 aa1.63□□□□□ -2.15
SCN2A-212ENST00000636662 LCE1AQ5T7P2 110 aa1.63□□□□□ -2.15
SCN2A-212ENST00000636662 KRTAP9-3Q9BYQ3 159 aa1.63□□□□□ -2.15
SCN2A-212ENST00000636662 MT1MQ8N339 61 aa1.62□□□□□ -2.15
SCN2A-212ENST00000636662 LOC100996750A0A140TA64 210 aa1.61□□□□□ -2.15
SCN2A-212ENST00000636662 EPPK1P58107 5090 aaKnown RBP1.61□□□□□ -2.15
SCN2A-212ENST00000636662 KRTAP4-9Q9BYQ8 210 aa1.61□□□□□ -2.15
SCN2A-212ENST00000636662 RNF213Q63HN8 5207 aa1.58□□□□□ -2.16
SCN2A-212ENST00000636662 HMCN2Q8NDA2 5059 aa1.57□□□□□ -2.16
SCN2A-212ENST00000636662 KIAA1109Q2LD37 5005 aa1.57□□□□□ -2.16
SCN2A-212ENST00000636662 BIRC6Q9NR09 4857 aa1.57□□□□□ -2.16
SCN2A-212ENST00000636662 KRTAP20-1Q3LI63 56 aa1.56□□□□□ -2.16
SCN2A-212ENST00000636662 KRTAP6-2Q3LI66 62 aa1.56□□□□□ -2.16
SCN2A-212ENST00000636662 KRTAP19-7Q3SYF9 63 aa1.54□□□□□ -2.16
SCN2A-212ENST00000636662 MUC17Q685J3 4493 aa1.54□□□□□ -2.16
SCN2A-212ENST00000636662 KMT2CQ8NEZ4 4911 aaKnown RBP1.53□□□□□ -2.16
SCN2A-212ENST00000636662 KRTAP2-2Q9BYT5 123 aa1.52□□□□□ -2.17
SCN2A-212ENST00000636662 KRTAP9-7A8MTY7 169 aa1.52□□□□□ -2.17
SCN2A-212ENST00000636662 KRTAP9-6A8MVA2 160 aa1.51□□□□□ -2.17
SCN2A-212ENST00000636662 KRTAP4-3Q9BYR4 195 aa1.51□□□□□ -2.17
SCN2A-212ENST00000636662 HERC2O95714 4834 aa1.5□□□□□ -2.17
SCN2A-212ENST00000636662 LRP2P98164 4655 aa1.47□□□□□ -2.17
SCN2A-212ENST00000636662 KRTAP19-6Q3LI70 58 aa1.47□□□□□ -2.17
SCN2A-212ENST00000636662 KRTAP6-3Q3LI67 103 aa1.44□□□□□ -2.18
SCN2A-212ENST00000636662 KRTAP4-11Q9BYQ6 195 aa1.43□□□□□ -2.18
SCN2A-212ENST00000636662 KRTAP9-4Q9BYQ2 154 aa1.41□□□□□ -2.18
SCN2A-212ENST00000636662 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.41□□□□□ -2.18
SCN2A-212ENST00000636662 LPAP08519 4548 aa1.41□□□□□ -2.18
SCN2A-212ENST00000636662 FAT4Q6V0I7 4981 aa1.4□□□□□ -2.18
SCN2A-212ENST00000636662 SSPOA2VEC9 5147 aa1.4□□□□□ -2.19
SCN2A-212ENST00000636662 USH2AO75445 5202 aa1.4□□□□□ -2.19
SCN2A-212ENST00000636662 SYNE1Q8NF91 8797 aaKnown RBP1.37□□□□□ -2.19
SCN2A-212ENST00000636662 KRTAP20-2Q3LI61 65 aa1.36□□□□□ -2.19
SCN2A-212ENST00000636662 SYNE2Q8WXH0 6885 aaKnown RBP1.36□□□□□ -2.19
SCN2A-212ENST00000636662 KRTAP6-1Q3LI64 71 aa1.35□□□□□ -2.19
SCN2A-212ENST00000636662 MUC2Q02817 5179 aa1.32□□□□□ -2.2
SCN2A-212ENST00000636662 KRTAP5-5Q701N2 237 aaPredicted RBP1.28□□□□□ -2.2
SCN2A-212ENST00000636662 KRTAP9-9Q9BYP9 154 aa1.23□□□□□ -2.21
SCN2A-212ENST00000636662 OBSCNQ5VST9 7968 aa1.23□□□□□ -2.21
SCN2A-212ENST00000636662 KRTAP4-4Q9BYR3 166 aa1.23□□□□□ -2.21
SCN2A-212ENST00000636662 KRTAP4-6Q9BYQ5 205 aa1.2□□□□□ -2.22
SCN2A-212ENST00000636662 KRTAP4-12Q9BQ66 201 aa1.17□□□□□ -2.22
SCN2A-212ENST00000636662 KRTAP4-2Q9BYR5 136 aa1.17□□□□□ -2.22
SCN2A-212ENST00000636662 KMT2DO14686 5537 aa1.15□□□□□ -2.23
SCN2A-212ENST00000636662 FSIP2Q5CZC0 6907 aa1.15□□□□□ -2.23
SCN2A-212ENST00000636662 NEBP20929 6669 aa1.14□□□□□ -2.23
SCN2A-212ENST00000636662 MDN1Q9NU22 5596 aa1.13□□□□□ -2.23
SCN2A-212ENST00000636662 KRTAP5-9P26371 169 aa1.1□□□□□ -2.23
SCN2A-212ENST00000636662 MUC19Q7Z5P9 8384 aa1.08□□□□□ -2.24
SCN2A-212ENST00000636662 DSTQ03001 7570 aaKnown RBP1.07□□□□□ -2.24
SCN2A-212ENST00000636662 KRTAP5-4Q6L8H1 288 aa1.03□□□□□ -2.24
SCN2A-212ENST00000636662 MUC12Q9UKN1 5478 aa1.03□□□□□ -2.25
SCN2A-212ENST00000636662 KRTAP5-2Q701N4 177 aa1.02□□□□□ -2.25
SCN2A-212ENST00000636662 FCGBPQ9Y6R7 5405 aaPredicted RBP1□□□□□ -2.25
SCN2A-212ENST00000636662 MACF1Q9UPN3 7388 aaKnown RBP0.98□□□□□ -2.25
SCN2A-212ENST00000636662 KRTAP5-10Q6L8G5 202 aa0.98□□□□□ -2.25
SCN2A-212ENST00000636662 KRTAP21-1Q3LI58 79 aa0.95□□□□□ -2.26
SCN2A-212ENST00000636662 MUC5BQ9HC84 5762 aaPredicted RBP0.92□□□□□ -2.26
SCN2A-212ENST00000636662 KRTAP5-3Q6L8H2 238 aa0.92□□□□□ -2.26
SCN2A-212ENST00000636662 GPR98Q8WXG9 6306 aa0.86□□□□□ -2.27
SCN2A-212ENST00000636662 KRTAP5-1Q6L8H4 278 aa0.86□□□□□ -2.27
SCN2A-212ENST00000636662 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.85□□□□□ -2.27
SCN2A-212ENST00000636662 HMCN1Q96RW7 5635 aa0.84□□□□□ -2.27
SCN2A-212ENST00000636662 PHGR1C9JFL3 82 aa0.83□□□□□ -2.28
SCN2A-212ENST00000636662 KRTAP5-11Q6L8G4 156 aa0.81□□□□□ -2.28
SCN2A-212ENST00000636662 KRTAP5-8O75690 187 aa0.8□□□□□ -2.28
SCN2A-212ENST00000636662 MUC5ACP98088 5654 aa0.79□□□□□ -2.28
SCN2A-212ENST00000636662 AHNAK2Q8IVF2 5795 aa0.78□□□□□ -2.28
SCN2A-212ENST00000636662 KRTAP21-2Q3LI59 83 aa0.76□□□□□ -2.29
SCN2A-212ENST00000636662 KRTAP5-7Q6L8G8 165 aa0.73□□□□□ -2.29
SCN2A-212ENST00000636662 AHNAKQ09666 5890 aaKnown RBP0.69□□□□□ -2.3
SCN2A-212ENST00000636662 MUC16Q8WXI7 14507 aa0.67□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 64 ms