RNA–Protein interactions for RNA: ENST00000636662.2

SCN2A-212, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 9,456 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-212ENST00000636662 MYT1Q01538 1121 aa9.76□□□□□ -0.85
SCN2A-212ENST00000636662 PELP1Q8IZL8 1130 aaKnown RBP9.65□□□□□ -0.87
SCN2A-212ENST00000636662 ERICH6Q7L0X2 663 aa9.16□□□□□ -0.94
SCN2A-212ENST00000636662 TTBK1Q5TCY1 1321 aaPredicted RBP9.15□□□□□ -0.95
SCN2A-212ENST00000636662 CCER1Q8TC90 406 aaPredicted RBP8.9□□□□□ -0.99
SCN2A-212ENST00000636662 ZEB1P37275 1124 aaPredicted RBP8.78□□□□□ -1
SCN2A-212ENST00000636662 CENPBP07199 599 aaPredicted RBP8.74□□□□□ -1.01
SCN2A-212ENST00000636662 YTHDC1Q96MU7 727 aaKnown RBP8.69□□□□□ -1.02
SCN2A-212ENST00000636662 RANGAP1P46060 587 aaPredicted RBP8.53□□□□□ -1.04
SCN2A-212ENST00000636662 DAXXQ9UER7 740 aaPredicted RBP8.49□□□□□ -1.05
SCN2A-212ENST00000636662 NISCHQ9Y2I1 1504 aa8.47□□□□□ -1.05
SCN2A-212ENST00000636662 HRCP23327 699 aa8.47□□□□□ -1.05
SCN2A-212ENST00000636662 NEFLP07196 543 aa8.45□□□□□ -1.06
SCN2A-212ENST00000636662 EHMT2Q96KQ7 1210 aa8.36□□□□□ -1.07
SCN2A-212ENST00000636662 CLSPNQ9HAW4 1339 aa8.34□□□□□ -1.07
SCN2A-212ENST00000636662 DCAF8L2P0C7V8 631 aa8.34□□□□□ -1.07
SCN2A-212ENST00000636662 RTL5Q5HYW3 569 aaPredicted RBP8.33□□□□□ -1.08
SCN2A-212ENST00000636662 MYT1LQ9UL68 1186 aa8.33□□□□□ -1.08
SCN2A-212ENST00000636662 EIF5BO60841 1220 aaKnown RBP8.31□□□□□ -1.08
SCN2A-212ENST00000636662 PCGF6Q9BYE7 350 aa8.28□□□□□ -1.08
SCN2A-212ENST00000636662 GLIPR1L2Q4G1C9 344 aa8.25□□□□□ -1.09
SCN2A-212ENST00000636662 ZNF316A6NFI3 1004 aaPredicted RBP8.24□□□□□ -1.09
SCN2A-212ENST00000636662 TRIM26Q12899 539 aaPredicted RBP8.19□□□□□ -1.1
SCN2A-212ENST00000636662 APLP2Q06481 763 aa8.14□□□□□ -1.11
SCN2A-212ENST00000636662 SUPT5HO00267 1087 aaKnown RBP8.1□□□□□ -1.11
SCN2A-212ENST00000636662 ACIN1Q9UKV3 1341 aaKnown RBP8.04□□□□□ -1.12
SCN2A-212ENST00000636662 GTF3C3Q9Y5Q9 886 aa7.98□□□□□ -1.13
SCN2A-212ENST00000636662 AMER1Q5JTC6 1135 aaPredicted RBP7.95□□□□□ -1.14
SCN2A-212ENST00000636662 DCAF1Q9Y4B6 1507 aa7.95□□□□□ -1.14
SCN2A-212ENST00000636662 DIEXFQ68CQ4 756 aaKnown RBP7.94□□□□□ -1.14
SCN2A-212ENST00000636662 FAM9AQ8IZU1 332 aaPredicted RBP7.94□□□□□ -1.14
SCN2A-212ENST00000636662 POLR3GLQ9BT43 218 aa7.9□□□□□ -1.14
SCN2A-212ENST00000636662 CCDC180Q9P1Z9 1646 aa7.9□□□□□ -1.14
SCN2A-212ENST00000636662 BCL11AQ9H165 835 aa7.9□□□□□ -1.14
SCN2A-212ENST00000636662 ANP32EQ9BTT0 268 aa7.9□□□□□ -1.15
SCN2A-212ENST00000636662 CNGB1Q14028 1251 aaPredicted RBP7.89□□□□□ -1.15
SCN2A-212ENST00000636662 TNNT2P45379 298 aaPredicted RBP7.89□□□□□ -1.15
SCN2A-212ENST00000636662 ANP32BQ92688 251 aaKnown RBP7.89□□□□□ -1.15
SCN2A-212ENST00000636662 CDK11BP21127 795 aaKnown RBP7.87□□□□□ -1.15
SCN2A-212ENST00000636662 SLC24A1O60721 1099 aa7.86□□□□□ -1.15
SCN2A-212ENST00000636662 SCAF1Q9H7N4 1312 aaKnown RBP7.85□□□□□ -1.15
SCN2A-212ENST00000636662 CDK11AQ9UQ88 783 aaPredicted RBP7.84□□□□□ -1.15
SCN2A-212ENST00000636662 BCANQ96GW7 911 aa7.83□□□□□ -1.16
SCN2A-212ENST00000636662 ERICH6BQ5W0A0 696 aa7.8□□□□□ -1.16
SCN2A-212ENST00000636662 PPARGC1BQ86YN6 1023 aaKnown RBP7.8□□□□□ -1.16
SCN2A-212ENST00000636662 ATP1B4Q9UN42 357 aaPredicted RBP7.8□□□□□ -1.16
SCN2A-212ENST00000636662 ARXQ96QS3 562 aa7.78□□□□□ -1.16
SCN2A-212ENST00000636662 ZNF326Q5BKZ1 582 aaKnown RBP7.77□□□□□ -1.17
SCN2A-212ENST00000636662 ANP32AP39687 249 aaKnown RBP7.75□□□□□ -1.17
SCN2A-212ENST00000636662 ZBTB47Q9UFB7 747 aaPredicted RBP7.75□□□□□ -1.17
SCN2A-212ENST00000636662 SHROOM4Q9ULL8 1493 aa7.75□□□□□ -1.17
SCN2A-212ENST00000636662 NPM2Q86SE8 214 aaKnown RBP7.75□□□□□ -1.17
SCN2A-212ENST00000636662 NBR1Q14596 966 aa7.74□□□□□ -1.17
SCN2A-212ENST00000636662 SLC4A1APQ9BWU0 796 aaKnown RBP7.73□□□□□ -1.17
SCN2A-212ENST00000636662 NCLP19338 710 aaKnown RBP7.73□□□□□ -1.17
SCN2A-212ENST00000636662 TRIM41Q8WV44 630 aa7.72□□□□□ -1.17
SCN2A-212ENST00000636662 CHIC1Q5VXU3 224 aa7.68□□□□□ -1.18
SCN2A-212ENST00000636662 TRIM44Q96DX7 344 aaPredicted RBP7.67□□□□□ -1.18
SCN2A-212ENST00000636662 HSP90AA1P07900 732 aaKnown RBP7.67□□□□□ -1.18
SCN2A-212ENST00000636662 CALRP27797 417 aaKnown RBP7.66□□□□□ -1.18
SCN2A-212ENST00000636662 NEUROD1Q13562 356 aa7.66□□□□□ -1.18
SCN2A-212ENST00000636662 RTN4Q9NQC3 1192 aaKnown RBP7.63□□□□□ -1.19
SCN2A-212ENST00000636662 NAP1L5Q96NT1 182 aaPredicted RBP7.62□□□□□ -1.19
SCN2A-212ENST00000636662 PRKCSHP14314 528 aaPredicted RBP7.6□□□□□ -1.19
SCN2A-212ENST00000636662 DNTTIP2Q5QJE6 756 aaKnown RBP7.59□□□□□ -1.19
SCN2A-212ENST00000636662 CANXP27824 592 aaKnown RBP7.57□□□□□ -1.2
SCN2A-212ENST00000636662 ANP32CO43423 234 aa7.56□□□□□ -1.2
SCN2A-212ENST00000636662 TNNT3P45378 269 aaPredicted RBP7.56□□□□□ -1.2
SCN2A-212ENST00000636662 ARID4BQ4LE39 1312 aaPredicted RBP7.55□□□□□ -1.2
SCN2A-212ENST00000636662 DDRGK1Q96HY6 314 aa7.55□□□□□ -1.2
SCN2A-212ENST00000636662 PPM1GO15355 546 aaPredicted RBP7.54□□□□□ -1.2
SCN2A-212ENST00000636662 RSPH6AQ9H0K4 717 aa7.52□□□□□ -1.21
SCN2A-212ENST00000636662 ITGAEP38570 1179 aa7.51□□□□□ -1.21
SCN2A-212ENST00000636662 UPF2Q9HAU5 1272 aaKnown RBP7.5□□□□□ -1.21
SCN2A-212ENST00000636662 PTMAP06454 111 aaKnown RBP7.49□□□□□ -1.21
SCN2A-212ENST00000636662 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.49□□□□□ -1.21
SCN2A-212ENST00000636662 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.48□□□□□ -1.21
SCN2A-212ENST00000636662 UBTFP17480 764 aaKnown RBP7.47□□□□□ -1.21
SCN2A-212ENST00000636662 USP35Q9P2H5 1018 aa7.47□□□□□ -1.21
SCN2A-212ENST00000636662 DEKP35659 375 aaKnown RBP7.46□□□□□ -1.22
SCN2A-212ENST00000636662 NCBP3Q53F19 620 aaKnown RBP7.46□□□□□ -1.22
SCN2A-212ENST00000636662 ARID3AQ99856 593 aa7.46□□□□□ -1.22
SCN2A-212ENST00000636662 TULP1O00294 542 aaPredicted RBP7.46□□□□□ -1.22
SCN2A-212ENST00000636662 FKBP8Q14318 412 aa7.46□□□□□ -1.22
SCN2A-212ENST00000636662 NEFMP07197 916 aa7.44□□□□□ -1.22
SCN2A-212ENST00000636662 APPP05067 770 aa7.44□□□□□ -1.22
SCN2A-212ENST00000636662 NOP58Q9Y2X3 529 aaKnown RBP7.43□□□□□ -1.22
SCN2A-212ENST00000636662 CSRNP3Q8WYN3 585 aa7.43□□□□□ -1.22
SCN2A-212ENST00000636662 L1TD1Q5T7N2 865 aaKnown RBP7.43□□□□□ -1.22
SCN2A-212ENST00000636662 A0A0U1RQG5 324 aaPredicted RBP7.42□□□□□ -1.22
SCN2A-212ENST00000636662 PTMSP20962 102 aa7.42□□□□□ -1.22
SCN2A-212ENST00000636662 TPRNQ4KMQ1 711 aa7.41□□□□□ -1.22
SCN2A-212ENST00000636662 PKNOX2Q96KN3 472 aa7.41□□□□□ -1.22
SCN2A-212ENST00000636662 SUPT16HQ9Y5B9 1047 aaKnown RBP7.4□□□□□ -1.22
SCN2A-212ENST00000636662 LOC105371045A0A1W2PR82 267 aa7.4□□□□□ -1.23
SCN2A-212ENST00000636662 BECN1Q14457 450 aa7.39□□□□□ -1.23
SCN2A-212ENST00000636662 GOLGA6L22H0YM25 854 aa7.39□□□□□ -1.23
SCN2A-212ENST00000636662 UBE2Q2Q8WVN8 375 aa7.39□□□□□ -1.23
SCN2A-212ENST00000636662 MEX3CQ5U5Q3 659 aaKnown RBP7.38□□□□□ -1.23
SCN2A-212ENST00000636662 FANCIQ9NVI1 1328 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms