RNA–Protein interactions for RNA: ENST00000636559.1

SMARCA2-252, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 2 BASIC

Gene SMARCA2, Length 6,853 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-252ENST00000636559 ABCA13Q86UQ4 5058 aa2.45□□□□□ -2.02
SMARCA2-252ENST00000636559 MT4P47944 62 aa2.39□□□□□ -2.03
SMARCA2-252ENST00000636559 FAT4Q6V0I7 4981 aa2.39□□□□□ -2.03
SMARCA2-252ENST00000636559 LOC100996750A0A140TA64 210 aa2.39□□□□□ -2.03
SMARCA2-252ENST00000636559 KRTAP4-3Q9BYR4 195 aa2.39□□□□□ -2.03
SMARCA2-252ENST00000636559 MT3P25713 68 aa2.38□□□□□ -2.03
SMARCA2-252ENST00000636559 KRTAP9-6A0A140TA67 174 aa2.36□□□□□ -2.03
SMARCA2-252ENST00000636559 KRTAP19-7Q3SYF9 63 aa2.36□□□□□ -2.03
SMARCA2-252ENST00000636559 RNF213Q63HN8 5207 aa2.36□□□□□ -2.03
SMARCA2-252ENST00000636559 HMCN2Q8NDA2 5059 aa2.35□□□□□ -2.03
SMARCA2-252ENST00000636559 UBR4Q5T4S7 5183 aa2.32□□□□□ -2.04
SMARCA2-252ENST00000636559 FSIP2Q5CZC0 6907 aa2.32□□□□□ -2.04
SMARCA2-252ENST00000636559 MT1AP04731 61 aa2.28□□□□□ -2.04
SMARCA2-252ENST00000636559 PRM1P04553 51 aa2.27□□□□□ -2.05
SMARCA2-252ENST00000636559 LCE1DQ5T752 114 aa2.25□□□□□ -2.05
SMARCA2-252ENST00000636559 LCE1BQ5T7P3 118 aa2.25□□□□□ -2.05
SMARCA2-252ENST00000636559 KRTAP9-7A8MTY7 169 aa2.23□□□□□ -2.05
SMARCA2-252ENST00000636559 KRTAP6-3Q3LI67 103 aa2.23□□□□□ -2.05
SMARCA2-252ENST00000636559 LCE1AQ5T7P2 110 aa2.23□□□□□ -2.05
SMARCA2-252ENST00000636559 KRTAP20-1Q3LI63 56 aa2.22□□□□□ -2.05
SMARCA2-252ENST00000636559 KRTAP2-3P0C7H8 128 aa2.22□□□□□ -2.05
SMARCA2-252ENST00000636559 KRTAP2-4Q9BYR9 128 aa2.22□□□□□ -2.05
SMARCA2-252ENST00000636559 KRTAP2-1Q9BYU5 128 aa2.22□□□□□ -2.05
SMARCA2-252ENST00000636559 MUC2Q02817 5179 aa2.21□□□□□ -2.06
SMARCA2-252ENST00000636559 SYNE1Q8NF91 8797 aaKnown RBP2.2□□□□□ -2.06
SMARCA2-252ENST00000636559 KRTAP4-9Q9BYQ8 210 aa2.19□□□□□ -2.06
SMARCA2-252ENST00000636559 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.17□□□□□ -2.06
SMARCA2-252ENST00000636559 LCE5AQ5TCM9 118 aa2.17□□□□□ -2.06
SMARCA2-252ENST00000636559 SYNE2Q8WXH0 6885 aaKnown RBP2.16□□□□□ -2.06
SMARCA2-252ENST00000636559 KRTAP6-1Q3LI64 71 aa2.14□□□□□ -2.07
SMARCA2-252ENST00000636559 KRTAP9-6A8MVA2 160 aa2.13□□□□□ -2.07
SMARCA2-252ENST00000636559 KRTAP6-2Q3LI66 62 aa2.12□□□□□ -2.07
SMARCA2-252ENST00000636559 LCE4AQ5TA78 99 aa2.11□□□□□ -2.07
SMARCA2-252ENST00000636559 KRTAP9-4Q9BYQ2 154 aa2.11□□□□□ -2.07
SMARCA2-252ENST00000636559 KRTAP2-2Q9BYT5 123 aa2.09□□□□□ -2.08
SMARCA2-252ENST00000636559 OBSCNQ5VST9 7968 aa2.03□□□□□ -2.08
SMARCA2-252ENST00000636559 USH2AO75445 5202 aa1.97□□□□□ -2.09
SMARCA2-252ENST00000636559 LCE1CQ5T751 118 aa1.94□□□□□ -2.1
SMARCA2-252ENST00000636559 LCE1EQ5T753 118 aa1.94□□□□□ -2.1
SMARCA2-252ENST00000636559 LCE1FQ5T754 118 aa1.94□□□□□ -2.1
SMARCA2-252ENST00000636559 FCGBPQ9Y6R7 5405 aaPredicted RBP1.92□□□□□ -2.1
SMARCA2-252ENST00000636559 KRTAP5-9P26371 169 aa1.92□□□□□ -2.1
SMARCA2-252ENST00000636559 KMT2DO14686 5537 aa1.9□□□□□ -2.1
SMARCA2-252ENST00000636559 MACF1Q9UPN3 7388 aaKnown RBP1.88□□□□□ -2.11
SMARCA2-252ENST00000636559 DSTQ03001 7570 aaKnown RBP1.85□□□□□ -2.11
SMARCA2-252ENST00000636559 SSPOA2VEC9 5147 aa1.84□□□□□ -2.12
SMARCA2-252ENST00000636559 KRTAP9-9Q9BYP9 154 aa1.82□□□□□ -2.12
SMARCA2-252ENST00000636559 KRTAP4-6Q9BYQ5 205 aa1.82□□□□□ -2.12
SMARCA2-252ENST00000636559 NEBP20929 6669 aa1.81□□□□□ -2.12
SMARCA2-252ENST00000636559 KRTAP20-2Q3LI61 65 aa1.79□□□□□ -2.12
SMARCA2-252ENST00000636559 MUC12Q9UKN1 5478 aa1.76□□□□□ -2.13
SMARCA2-252ENST00000636559 GPR98Q8WXG9 6306 aa1.73□□□□□ -2.13
SMARCA2-252ENST00000636559 KRTAP4-11Q9BYQ6 195 aa1.69□□□□□ -2.14
SMARCA2-252ENST00000636559 KRTAP5-4Q6L8H1 288 aa1.67□□□□□ -2.14
SMARCA2-252ENST00000636559 MDN1Q9NU22 5596 aa1.66□□□□□ -2.14
SMARCA2-252ENST00000636559 KRTAP5-5Q701N2 237 aaPredicted RBP1.61□□□□□ -2.15
SMARCA2-252ENST00000636559 KRTAP4-4Q9BYR3 166 aa1.57□□□□□ -2.16
SMARCA2-252ENST00000636559 KRTAP4-12Q9BQ66 201 aa1.57□□□□□ -2.16
SMARCA2-252ENST00000636559 KRTAP4-2Q9BYR5 136 aa1.57□□□□□ -2.16
SMARCA2-252ENST00000636559 MUC19Q7Z5P9 8384 aa1.55□□□□□ -2.16
SMARCA2-252ENST00000636559 HMCN1Q96RW7 5635 aa1.53□□□□□ -2.16
SMARCA2-252ENST00000636559 KRTAP5-3Q6L8H2 238 aa1.46□□□□□ -2.18
SMARCA2-252ENST00000636559 MUC5ACP98088 5654 aa1.4□□□□□ -2.18
SMARCA2-252ENST00000636559 KRTAP5-8O75690 187 aa1.35□□□□□ -2.19
SMARCA2-252ENST00000636559 KRTAP5-2Q701N4 177 aa1.33□□□□□ -2.2
SMARCA2-252ENST00000636559 KRTAP5-10Q6L8G5 202 aa1.27□□□□□ -2.21
SMARCA2-252ENST00000636559 AHNAK2Q8IVF2 5795 aa1.27□□□□□ -2.21
SMARCA2-252ENST00000636559 MUC5BQ9HC84 5762 aaPredicted RBP1.24□□□□□ -2.21
SMARCA2-252ENST00000636559 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.24□□□□□ -2.21
SMARCA2-252ENST00000636559 PHGR1C9JFL3 82 aa1.22□□□□□ -2.21
SMARCA2-252ENST00000636559 KRTAP5-11Q6L8G4 156 aa1.18□□□□□ -2.22
SMARCA2-252ENST00000636559 KRTAP5-1Q6L8H4 278 aa1.17□□□□□ -2.22
SMARCA2-252ENST00000636559 KRTAP21-2Q3LI59 83 aa1.11□□□□□ -2.23
SMARCA2-252ENST00000636559 AHNAKQ09666 5890 aaKnown RBP1.11□□□□□ -2.23
SMARCA2-252ENST00000636559 KRTAP5-7Q6L8G8 165 aa0.99□□□□□ -2.25
SMARCA2-252ENST00000636559 KRTAP21-1Q3LI58 79 aa0.96□□□□□ -2.26
SMARCA2-252ENST00000636559 MUC16Q8WXI7 14507 aa0.76□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 6.1 ms