RNA–Protein interactions for RNA: ENST00000636135.1

SCN2A-210, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 8,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-210ENST00000636135 LCE3EQ5T5B0 92 aa1.49□□□□□ -2.17
SCN2A-210ENST00000636135 LCE3DQ9BYE3 92 aa1.48□□□□□ -2.17
SCN2A-210ENST00000636135 FAT4Q6V0I7 4981 aa1.48□□□□□ -2.17
SCN2A-210ENST00000636135 LCE5AQ5TCM9 118 aa1.47□□□□□ -2.17
SCN2A-210ENST00000636135 RNF213Q63HN8 5207 aa1.46□□□□□ -2.18
SCN2A-210ENST00000636135 MT1AP04731 61 aa1.45□□□□□ -2.18
SCN2A-210ENST00000636135 KRTAP4-7Q9BYR0 210 aa1.45□□□□□ -2.18
SCN2A-210ENST00000636135 KRTAP4-9Q9BYQ8 210 aa1.45□□□□□ -2.18
SCN2A-210ENST00000636135 MUC2Q02817 5179 aa1.45□□□□□ -2.18
SCN2A-210ENST00000636135 KRTAP19-6Q3LI70 58 aa1.45□□□□□ -2.18
SCN2A-210ENST00000636135 LCE1CQ5T751 118 aa1.44□□□□□ -2.18
SCN2A-210ENST00000636135 LCE1EQ5T753 118 aa1.44□□□□□ -2.18
SCN2A-210ENST00000636135 LCE1FQ5T754 118 aa1.44□□□□□ -2.18
SCN2A-210ENST00000636135 LCE1AQ5T7P2 110 aa1.44□□□□□ -2.18
SCN2A-210ENST00000636135 MUC5BQ9HC84 5762 aaPredicted RBP1.44□□□□□ -2.18
SCN2A-210ENST00000636135 KRTAP2-3P0C7H8 128 aa1.42□□□□□ -2.18
SCN2A-210ENST00000636135 KRTAP2-4Q9BYR9 128 aa1.42□□□□□ -2.18
SCN2A-210ENST00000636135 KRTAP2-1Q9BYU5 128 aa1.42□□□□□ -2.18
SCN2A-210ENST00000636135 KRTAP9-2Q9BYQ4 174 aa1.41□□□□□ -2.18
SCN2A-210ENST00000636135 LOC100996750A0A140TA64 210 aa1.41□□□□□ -2.18
SCN2A-210ENST00000636135 MT1MQ8N339 61 aa1.4□□□□□ -2.19
SCN2A-210ENST00000636135 LCE4AQ5TA78 99 aa1.4□□□□□ -2.19
SCN2A-210ENST00000636135 KRTAP19-3Q7Z4W3 81 aa1.4□□□□□ -2.19
SCN2A-210ENST00000636135 KRTAP4-3Q9BYR4 195 aa1.39□□□□□ -2.19
SCN2A-210ENST00000636135 LPAP08519 4548 aa1.38□□□□□ -2.19
SCN2A-210ENST00000636135 KRTAP4-6Q9BYQ5 205 aa1.38□□□□□ -2.19
SCN2A-210ENST00000636135 KRTAP9-6A0A140TA67 174 aa1.37□□□□□ -2.19
SCN2A-210ENST00000636135 KRTAP20-1Q3LI63 56 aa1.37□□□□□ -2.19
SCN2A-210ENST00000636135 PRM1P04553 51 aa1.36□□□□□ -2.19
SCN2A-210ENST00000636135 SYNE2Q8WXH0 6885 aaKnown RBP1.36□□□□□ -2.19
SCN2A-210ENST00000636135 SSPOA2VEC9 5147 aa1.33□□□□□ -2.2
SCN2A-210ENST00000636135 KRTAP19-7Q3SYF9 63 aa1.32□□□□□ -2.2
SCN2A-210ENST00000636135 FSIP2Q5CZC0 6907 aa1.32□□□□□ -2.2
SCN2A-210ENST00000636135 KRTAP9-7A8MTY7 169 aa1.3□□□□□ -2.2
SCN2A-210ENST00000636135 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.26□□□□□ -2.21
SCN2A-210ENST00000636135 KRTAP4-12Q9BQ66 201 aa1.26□□□□□ -2.21
SCN2A-210ENST00000636135 KRTAP5-9P26371 169 aa1.25□□□□□ -2.21
SCN2A-210ENST00000636135 USH2AO75445 5202 aa1.25□□□□□ -2.21
SCN2A-210ENST00000636135 KRTAP20-2Q3LI61 65 aa1.21□□□□□ -2.22
SCN2A-210ENST00000636135 SYNE1Q8NF91 8797 aaKnown RBP1.21□□□□□ -2.22
SCN2A-210ENST00000636135 KRTAP9-9Q9BYP9 154 aa1.19□□□□□ -2.22
SCN2A-210ENST00000636135 KRTAP9-4Q9BYQ2 154 aa1.19□□□□□ -2.22
SCN2A-210ENST00000636135 KRTAP6-3Q3LI67 103 aa1.19□□□□□ -2.22
SCN2A-210ENST00000636135 KRTAP4-2Q9BYR5 136 aa1.19□□□□□ -2.22
SCN2A-210ENST00000636135 KRTAP4-4Q9BYR3 166 aa1.17□□□□□ -2.22
SCN2A-210ENST00000636135 KRTAP9-6A8MVA2 160 aa1.16□□□□□ -2.22
SCN2A-210ENST00000636135 GPR98Q8WXG9 6306 aa1.16□□□□□ -2.22
SCN2A-210ENST00000636135 KRTAP6-2Q3LI66 62 aa1.15□□□□□ -2.23
SCN2A-210ENST00000636135 KRTAP5-5Q701N2 237 aaPredicted RBP1.15□□□□□ -2.23
SCN2A-210ENST00000636135 KRTAP2-2Q9BYT5 123 aa1.14□□□□□ -2.23
SCN2A-210ENST00000636135 HMCN1Q96RW7 5635 aa1.13□□□□□ -2.23
SCN2A-210ENST00000636135 FCGBPQ9Y6R7 5405 aaPredicted RBP1.12□□□□□ -2.23
SCN2A-210ENST00000636135 KMT2DO14686 5537 aa1.11□□□□□ -2.23
SCN2A-210ENST00000636135 OBSCNQ5VST9 7968 aa1.1□□□□□ -2.23
SCN2A-210ENST00000636135 MDN1Q9NU22 5596 aa1.09□□□□□ -2.23
SCN2A-210ENST00000636135 KRTAP6-1Q3LI64 71 aa1.09□□□□□ -2.24
SCN2A-210ENST00000636135 KRTAP5-4Q6L8H1 288 aa1.07□□□□□ -2.24
SCN2A-210ENST00000636135 KRTAP4-11Q9BYQ6 195 aa1.05□□□□□ -2.24
SCN2A-210ENST00000636135 MACF1Q9UPN3 7388 aaKnown RBP1.03□□□□□ -2.24
SCN2A-210ENST00000636135 KRTAP5-2Q701N4 177 aa1.01□□□□□ -2.25
SCN2A-210ENST00000636135 MUC12Q9UKN1 5478 aa1□□□□□ -2.25
SCN2A-210ENST00000636135 DSTQ03001 7570 aaKnown RBP0.99□□□□□ -2.25
SCN2A-210ENST00000636135 MUC5ACP98088 5654 aa0.99□□□□□ -2.25
SCN2A-210ENST00000636135 NEBP20929 6669 aa0.98□□□□□ -2.25
SCN2A-210ENST00000636135 AHNAK2Q8IVF2 5795 aa0.97□□□□□ -2.25
SCN2A-210ENST00000636135 KRTAP5-3Q6L8H2 238 aa0.96□□□□□ -2.26
SCN2A-210ENST00000636135 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.93□□□□□ -2.26
SCN2A-210ENST00000636135 MUC19Q7Z5P9 8384 aa0.92□□□□□ -2.26
SCN2A-210ENST00000636135 KRTAP5-8O75690 187 aa0.9□□□□□ -2.26
SCN2A-210ENST00000636135 KRTAP5-7Q6L8G8 165 aa0.89□□□□□ -2.27
SCN2A-210ENST00000636135 AHNAKQ09666 5890 aaKnown RBP0.89□□□□□ -2.27
SCN2A-210ENST00000636135 PHGR1C9JFL3 82 aa0.86□□□□□ -2.27
SCN2A-210ENST00000636135 KRTAP5-1Q6L8H4 278 aa0.86□□□□□ -2.27
SCN2A-210ENST00000636135 KRTAP5-10Q6L8G5 202 aa0.86□□□□□ -2.27
SCN2A-210ENST00000636135 KRTAP5-11Q6L8G4 156 aa0.81□□□□□ -2.28
SCN2A-210ENST00000636135 KRTAP21-2Q3LI59 83 aa0.72□□□□□ -2.29
SCN2A-210ENST00000636135 KRTAP21-1Q3LI58 79 aa0.71□□□□□ -2.3
SCN2A-210ENST00000636135 MUC16Q8WXI7 14507 aa0.5□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 44 ms