RNA–Protein interactions for RNA: ENST00000636135.1

SCN2A-210, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 8,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-210ENST00000636135 NISCHQ9Y2I1 1504 aa8.35□□□□□ -1.07
SCN2A-210ENST00000636135 CCDC180Q9P1Z9 1646 aa7.71□□□□□ -1.18
SCN2A-210ENST00000636135 MYT1Q01538 1121 aa7.42□□□□□ -1.22
SCN2A-210ENST00000636135 DCAF8L2P0C7V8 631 aa7.36□□□□□ -1.23
SCN2A-210ENST00000636135 PELP1Q8IZL8 1130 aaKnown RBP7.28□□□□□ -1.24
SCN2A-210ENST00000636135 DCAF1Q9Y4B6 1507 aa7.27□□□□□ -1.25
SCN2A-210ENST00000636135 MYO15BQ96JP2 1530 aa7.19□□□□□ -1.26
SCN2A-210ENST00000636135 EHMT2Q96KQ7 1210 aa7.13□□□□□ -1.27
SCN2A-210ENST00000636135 ZCCHC6Q5VYS8 1495 aaKnown RBP7.12□□□□□ -1.27
SCN2A-210ENST00000636135 TTBK1Q5TCY1 1321 aaPredicted RBP6.94□□□□□ -1.3
SCN2A-210ENST00000636135 NACADO15069 1562 aa6.93□□□□□ -1.3
SCN2A-210ENST00000636135 ZEB1P37275 1124 aaPredicted RBP6.89□□□□□ -1.31
SCN2A-210ENST00000636135 CCER1Q8TC90 406 aaPredicted RBP6.86□□□□□ -1.31
SCN2A-210ENST00000636135 SHROOM4Q9ULL8 1493 aa6.85□□□□□ -1.31
SCN2A-210ENST00000636135 YTHDC1Q96MU7 727 aaKnown RBP6.85□□□□□ -1.31
SCN2A-210ENST00000636135 ABCC9O60706 1549 aa6.83□□□□□ -1.32
SCN2A-210ENST00000636135 RB1CC1Q8TDY2 1594 aa6.78□□□□□ -1.32
SCN2A-210ENST00000636135 CENPBP07199 599 aaPredicted RBP6.75□□□□□ -1.33
SCN2A-210ENST00000636135 KAT6BQ8WYB5 2073 aa6.72□□□□□ -1.33
SCN2A-210ENST00000636135 RANGAP1P46060 587 aaPredicted RBP6.69□□□□□ -1.34
SCN2A-210ENST00000636135 CHIC1Q5VXU3 224 aa6.69□□□□□ -1.34
SCN2A-210ENST00000636135 PRDM2Q13029 1718 aa6.63□□□□□ -1.35
SCN2A-210ENST00000636135 CLSPNQ9HAW4 1339 aa6.63□□□□□ -1.35
SCN2A-210ENST00000636135 SMARCA2P51531 1590 aa6.62□□□□□ -1.35
SCN2A-210ENST00000636135 BAZ1AQ9NRL2 1556 aaPredicted RBP6.61□□□□□ -1.35
SCN2A-210ENST00000636135 UNC13AQ9UPW8 1703 aa6.6□□□□□ -1.35
SCN2A-210ENST00000636135 ERICH6Q7L0X2 663 aa6.6□□□□□ -1.35
SCN2A-210ENST00000636135 SUPT5HO00267 1087 aaKnown RBP6.58□□□□□ -1.36
SCN2A-210ENST00000636135 FAM9AQ8IZU1 332 aaPredicted RBP6.58□□□□□ -1.36
SCN2A-210ENST00000636135 PEG3Q9GZU2 1588 aa6.55□□□□□ -1.36
SCN2A-210ENST00000636135 ATP1B4Q9UN42 357 aaPredicted RBP6.54□□□□□ -1.36
SCN2A-210ENST00000636135 SCRIBQ14160 1630 aa6.53□□□□□ -1.36
SCN2A-210ENST00000636135 MYT1LQ9UL68 1186 aa6.52□□□□□ -1.37
SCN2A-210ENST00000636135 APLP2Q06481 763 aa6.52□□□□□ -1.37
SCN2A-210ENST00000636135 CNGB1Q14028 1251 aaPredicted RBP6.5□□□□□ -1.37
SCN2A-210ENST00000636135 TOP2AP11388 1531 aaKnown RBP6.49□□□□□ -1.37
SCN2A-210ENST00000636135 SMARCA4P51532 1647 aa6.49□□□□□ -1.37
SCN2A-210ENST00000636135 EEA1Q15075 1411 aa6.49□□□□□ -1.37
SCN2A-210ENST00000636135 NEFLP07196 543 aa6.46□□□□□ -1.37
SCN2A-210ENST00000636135 PLPPR3Q6T4P5 718 aa6.41□□□□□ -1.38
SCN2A-210ENST00000636135 HMGXB3Q12766 1538 aa6.4□□□□□ -1.39
SCN2A-210ENST00000636135 EIF4G1Q04637 1599 aaKnown RBP6.39□□□□□ -1.39
SCN2A-210ENST00000636135 RSF1Q96T23 1441 aaPredicted RBP6.37□□□□□ -1.39
SCN2A-210ENST00000636135 BCL11AQ9H165 835 aa6.37□□□□□ -1.39
SCN2A-210ENST00000636135 ACIN1Q9UKV3 1341 aaKnown RBP6.35□□□□□ -1.39
SCN2A-210ENST00000636135 KIF21BO75037 1637 aa6.34□□□□□ -1.39
SCN2A-210ENST00000636135 KIF21AQ7Z4S6 1674 aa6.34□□□□□ -1.39
SCN2A-210ENST00000636135 POLR3GLQ9BT43 218 aa6.34□□□□□ -1.39
SCN2A-210ENST00000636135 PCGF6Q9BYE7 350 aa6.33□□□□□ -1.4
SCN2A-210ENST00000636135 TRIM26Q12899 539 aaPredicted RBP6.32□□□□□ -1.4
SCN2A-210ENST00000636135 BIVM-ERCC5R4GMW8 1640 aa6.32□□□□□ -1.4
SCN2A-210ENST00000636135 BAZ1BQ9UIG0 1483 aaKnown RBP6.32□□□□□ -1.4
SCN2A-210ENST00000636135 SLC4A1APQ9BWU0 796 aaKnown RBP6.32□□□□□ -1.4
SCN2A-210ENST00000636135 WDR97A6NE52 1622 aa6.3□□□□□ -1.4
SCN2A-210ENST00000636135 WIZO95785 1651 aa6.3□□□□□ -1.4
SCN2A-210ENST00000636135 DAXXQ9UER7 740 aaPredicted RBP6.28□□□□□ -1.4
SCN2A-210ENST00000636135 GLIPR1L2Q4G1C9 344 aa6.28□□□□□ -1.4
SCN2A-210ENST00000636135 ERICH3Q5RHP9 1530 aa6.28□□□□□ -1.4
SCN2A-210ENST00000636135 SENP3Q9H4L4 574 aaPredicted RBP6.25□□□□□ -1.41
SCN2A-210ENST00000636135 HRCP23327 699 aa6.25□□□□□ -1.41
SCN2A-210ENST00000636135 SLC24A1O60721 1099 aa6.25□□□□□ -1.41
SCN2A-210ENST00000636135 BICRAQ9NZM4 1560 aa6.24□□□□□ -1.41
SCN2A-210ENST00000636135 TOP2BQ02880 1626 aa6.24□□□□□ -1.41
SCN2A-210ENST00000636135 WRNQ14191 1432 aaPredicted RBP eCLIP6.24□□□□□ -1.41
SCN2A-210ENST00000636135 MROH2BQ7Z745 1585 aa6.24□□□□□ -1.41
SCN2A-210ENST00000636135 RTL5Q5HYW3 569 aaPredicted RBP6.22□□□□□ -1.41
SCN2A-210ENST00000636135 CUL7Q14999 1698 aa6.21□□□□□ -1.42
SCN2A-210ENST00000636135 PLEKHG5O94827 1062 aa6.21□□□□□ -1.42
SCN2A-210ENST00000636135 ABCC8Q09428 1581 aa6.21□□□□□ -1.42
SCN2A-210ENST00000636135 CEP164Q9UPV0 1460 aa6.21□□□□□ -1.42
SCN2A-210ENST00000636135 CC2D2AQ9P2K1 1620 aa6.2□□□□□ -1.42
SCN2A-210ENST00000636135 PPARGC1BQ86YN6 1023 aaKnown RBP6.2□□□□□ -1.42
SCN2A-210ENST00000636135 GOLGA3Q08378 1498 aa6.2□□□□□ -1.42
SCN2A-210ENST00000636135 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.2□□□□□ -1.42
SCN2A-210ENST00000636135 HNRNPUL2Q1KMD3 747 aaKnown RBP6.2□□□□□ -1.42
SCN2A-210ENST00000636135 ARID4BQ4LE39 1312 aaPredicted RBP6.18□□□□□ -1.42
SCN2A-210ENST00000636135 MAP3K1Q13233 1512 aa6.16□□□□□ -1.42
SCN2A-210ENST00000636135 EIF5BO60841 1220 aaKnown RBP6.16□□□□□ -1.42
SCN2A-210ENST00000636135 CTTNBP2Q8WZ74 1663 aa6.16□□□□□ -1.42
SCN2A-210ENST00000636135 NCAPD3P42695 1498 aa6.15□□□□□ -1.42
SCN2A-210ENST00000636135 THOC2Q8NI27 1593 aaKnown RBP6.15□□□□□ -1.43
SCN2A-210ENST00000636135 A0A0G2JS52 829 aa6.15□□□□□ -1.43
SCN2A-210ENST00000636135 TRIM41Q8WV44 630 aa6.14□□□□□ -1.43
SCN2A-210ENST00000636135 TNIKQ9UKE5 1360 aa6.14□□□□□ -1.43
SCN2A-210ENST00000636135 CCDC88BA6NC98 1476 aa6.13□□□□□ -1.43
SCN2A-210ENST00000636135 ANP32EQ9BTT0 268 aa6.13□□□□□ -1.43
SCN2A-210ENST00000636135 EFCAB5A4FU69 1503 aa6.13□□□□□ -1.43
SCN2A-210ENST00000636135 ITGAEP38570 1179 aa6.12□□□□□ -1.43
SCN2A-210ENST00000636135 ATAD2BQ9ULI0 1458 aa6.11□□□□□ -1.43
SCN2A-210ENST00000636135 LAMC3Q9Y6N6 1575 aa6.11□□□□□ -1.43
SCN2A-210ENST00000636135 CFAP43Q8NDM7 1665 aa6.11□□□□□ -1.43
SCN2A-210ENST00000636135 NCBP3Q53F19 620 aaKnown RBP6.09□□□□□ -1.43
SCN2A-210ENST00000636135 BCANQ96GW7 911 aa6.09□□□□□ -1.43
SCN2A-210ENST00000636135 CECR2Q9BXF3 1484 aa6.09□□□□□ -1.43
SCN2A-210ENST00000636135 MYH10P35580 1976 aa6.08□□□□□ -1.44
SCN2A-210ENST00000636135 NEFMP07197 916 aa6.08□□□□□ -1.44
SCN2A-210ENST00000636135 ZNF316A6NFI3 1004 aaPredicted RBP6.07□□□□□ -1.44
SCN2A-210ENST00000636135 DNMBPQ6XZF7 1577 aa6.07□□□□□ -1.44
SCN2A-210ENST00000636135 MYO10Q9HD67 2058 aa6.07□□□□□ -1.44
SCN2A-210ENST00000636135 CACNA1FO60840 1977 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms