RNA–Protein interactions for RNA: ENST00000615287.4

CHRNA4-207, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5 BASIC

Gene CHRNA4, Length 5,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-207ENST00000615287 MT1MQ8N339 61 aa5.88□□□□□ -1.47
CHRNA4-207ENST00000615287 LCE3EQ5T5B0 92 aa5.87□□□□□ -1.47
CHRNA4-207ENST00000615287 MT4P47944 62 aa5.85□□□□□ -1.47
CHRNA4-207ENST00000615287 FAT4Q6V0I7 4981 aa5.74□□□□□ -1.49
CHRNA4-207ENST00000615287 MT3P25713 68 aa5.74□□□□□ -1.49
CHRNA4-207ENST00000615287 RNF213Q63HN8 5207 aa5.73□□□□□ -1.49
CHRNA4-207ENST00000615287 UBR4Q5T4S7 5183 aa5.72□□□□□ -1.49
CHRNA4-207ENST00000615287 KRTAP4-3Q9BYR4 195 aa5.64□□□□□ -1.51
CHRNA4-207ENST00000615287 LOC100996750A0A140TA64 210 aa5.63□□□□□ -1.51
CHRNA4-207ENST00000615287 FSIP2Q5CZC0 6907 aa5.63□□□□□ -1.51
CHRNA4-207ENST00000615287 KRTAP9-7A8MTY7 169 aa5.55□□□□□ -1.52
CHRNA4-207ENST00000615287 KRTAP20-1Q3LI63 56 aa5.55□□□□□ -1.52
CHRNA4-207ENST00000615287 KRTAP19-7Q3SYF9 63 aa5.55□□□□□ -1.52
CHRNA4-207ENST00000615287 HMCN2Q8NDA2 5059 aa5.49□□□□□ -1.53
CHRNA4-207ENST00000615287 KRTAP6-3Q3LI67 103 aa5.47□□□□□ -1.53
CHRNA4-207ENST00000615287 LCE1DQ5T752 114 aa5.46□□□□□ -1.54
CHRNA4-207ENST00000615287 LCE1BQ5T7P3 118 aa5.46□□□□□ -1.54
CHRNA4-207ENST00000615287 MT1AP04731 61 aa5.44□□□□□ -1.54
CHRNA4-207ENST00000615287 LCE1AQ5T7P2 110 aa5.4□□□□□ -1.55
CHRNA4-207ENST00000615287 SYNE1Q8NF91 8797 aaKnown RBP5.38□□□□□ -1.55
CHRNA4-207ENST00000615287 MUC2Q02817 5179 aa5.38□□□□□ -1.55
CHRNA4-207ENST00000615287 SYNE2Q8WXH0 6885 aaKnown RBP5.37□□□□□ -1.55
CHRNA4-207ENST00000615287 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.35□□□□□ -1.55
CHRNA4-207ENST00000615287 KRTAP2-3P0C7H8 128 aa5.34□□□□□ -1.55
CHRNA4-207ENST00000615287 KRTAP2-4Q9BYR9 128 aa5.34□□□□□ -1.55
CHRNA4-207ENST00000615287 PRM1P04553 51 aa5.27□□□□□ -1.57
CHRNA4-207ENST00000615287 KRTAP2-1Q9BYU5 128 aa5.24□□□□□ -1.57
CHRNA4-207ENST00000615287 LCE5AQ5TCM9 118 aa5.16□□□□□ -1.58
CHRNA4-207ENST00000615287 LCE4AQ5TA78 99 aa5.16□□□□□ -1.58
CHRNA4-207ENST00000615287 KRTAP2-2Q9BYT5 123 aa5.16□□□□□ -1.58
CHRNA4-207ENST00000615287 KRTAP4-9Q9BYQ8 210 aa5.14□□□□□ -1.59
CHRNA4-207ENST00000615287 KRTAP6-1Q3LI64 71 aa5.07□□□□□ -1.6
CHRNA4-207ENST00000615287 KRTAP6-2Q3LI66 62 aa5.05□□□□□ -1.6
CHRNA4-207ENST00000615287 KRTAP9-4Q9BYQ2 154 aa5.03□□□□□ -1.6
CHRNA4-207ENST00000615287 OBSCNQ5VST9 7968 aa4.94□□□□□ -1.62
CHRNA4-207ENST00000615287 KRTAP9-6A8MVA2 160 aa4.9□□□□□ -1.62
CHRNA4-207ENST00000615287 USH2AO75445 5202 aa4.74□□□□□ -1.65
CHRNA4-207ENST00000615287 LCE1CQ5T751 118 aa4.67□□□□□ -1.66
CHRNA4-207ENST00000615287 LCE1EQ5T753 118 aa4.67□□□□□ -1.66
CHRNA4-207ENST00000615287 LCE1FQ5T754 118 aa4.67□□□□□ -1.66
CHRNA4-207ENST00000615287 KRTAP5-9P26371 169 aa4.62□□□□□ -1.67
CHRNA4-207ENST00000615287 NEBP20929 6669 aa4.57□□□□□ -1.68
CHRNA4-207ENST00000615287 FCGBPQ9Y6R7 5405 aaPredicted RBP4.55□□□□□ -1.68
CHRNA4-207ENST00000615287 MACF1Q9UPN3 7388 aaKnown RBP4.54□□□□□ -1.68
CHRNA4-207ENST00000615287 KRTAP9-9Q9BYP9 154 aa4.5□□□□□ -1.69
CHRNA4-207ENST00000615287 DSTQ03001 7570 aaKnown RBP4.49□□□□□ -1.69
CHRNA4-207ENST00000615287 SSPOA2VEC9 5147 aa4.47□□□□□ -1.69
CHRNA4-207ENST00000615287 KMT2DO14686 5537 aa4.39□□□□□ -1.71
CHRNA4-207ENST00000615287 KRTAP4-6Q9BYQ5 205 aa4.36□□□□□ -1.71
CHRNA4-207ENST00000615287 KRTAP20-2Q3LI61 65 aa4.31□□□□□ -1.72
CHRNA4-207ENST00000615287 MDN1Q9NU22 5596 aa4.15□□□□□ -1.75
CHRNA4-207ENST00000615287 MUC12Q9UKN1 5478 aa4.13□□□□□ -1.75
CHRNA4-207ENST00000615287 KRTAP5-4Q6L8H1 288 aa4.05□□□□□ -1.76
CHRNA4-207ENST00000615287 GPR98Q8WXG9 6306 aa4□□□□□ -1.77
CHRNA4-207ENST00000615287 KRTAP4-11Q9BYQ6 195 aa3.9□□□□□ -1.79
CHRNA4-207ENST00000615287 MUC19Q7Z5P9 8384 aa3.84□□□□□ -1.79
CHRNA4-207ENST00000615287 KRTAP4-12Q9BQ66 201 aa3.82□□□□□ -1.8
CHRNA4-207ENST00000615287 KRTAP4-2Q9BYR5 136 aa3.82□□□□□ -1.8
CHRNA4-207ENST00000615287 KRTAP4-4Q9BYR3 166 aa3.77□□□□□ -1.81
CHRNA4-207ENST00000615287 KRTAP5-5Q701N2 237 aaPredicted RBP3.74□□□□□ -1.81
CHRNA4-207ENST00000615287 KRTAP5-3Q6L8H2 238 aa3.6□□□□□ -1.83
CHRNA4-207ENST00000615287 MUC5ACP98088 5654 aa3.41□□□□□ -1.86
CHRNA4-207ENST00000615287 AHNAK2Q8IVF2 5795 aa3.35□□□□□ -1.87
CHRNA4-207ENST00000615287 KRTAP5-8O75690 187 aa3.28□□□□□ -1.88
CHRNA4-207ENST00000615287 HMCN1Q96RW7 5635 aa3.26□□□□□ -1.89
CHRNA4-207ENST00000615287 KRTAP5-2Q701N4 177 aa3.12□□□□□ -1.91
CHRNA4-207ENST00000615287 PHGR1C9JFL3 82 aa2.96□□□□□ -1.94
CHRNA4-207ENST00000615287 KRTAP5-10Q6L8G5 202 aa2.94□□□□□ -1.94
CHRNA4-207ENST00000615287 MUC5BQ9HC84 5762 aaPredicted RBP2.88□□□□□ -1.95
CHRNA4-207ENST00000615287 KRTAP5-11Q6L8G4 156 aa2.8□□□□□ -1.96
CHRNA4-207ENST00000615287 AHNAKQ09666 5890 aaKnown RBP2.79□□□□□ -1.96
CHRNA4-207ENST00000615287 KRTAP5-1Q6L8H4 278 aa2.75□□□□□ -1.97
CHRNA4-207ENST00000615287 KRTAP21-2Q3LI59 83 aa2.58□□□□□ -2
CHRNA4-207ENST00000615287 KRTAP5-7Q6L8G8 165 aa2.48□□□□□ -2.01
CHRNA4-207ENST00000615287 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.43□□□□□ -2.02
CHRNA4-207ENST00000615287 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
CHRNA4-207ENST00000615287 MUC16Q8WXI7 14507 aa1.7□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 65 ms