RNA–Protein interactions for RNA: ENST00000606377.6

PAX6-231, Transcript of paired box 6, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PAX6, Length 6,901 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-231ENST00000606377 LOC100996750A0A140TA64 210 aa3.12□□□□□ -1.91
PAX6-231ENST00000606377 KRTAP20-1Q3LI63 56 aa3.1□□□□□ -1.91
PAX6-231ENST00000606377 LCE1BQ5T7P3 118 aa3.1□□□□□ -1.91
PAX6-231ENST00000606377 KRTAP4-3Q9BYR4 195 aa3.09□□□□□ -1.91
PAX6-231ENST00000606377 MT3P25713 68 aa3.07□□□□□ -1.92
PAX6-231ENST00000606377 LCE1DQ5T752 114 aa3.05□□□□□ -1.92
PAX6-231ENST00000606377 PRM1P04553 51 aa2.98□□□□□ -1.93
PAX6-231ENST00000606377 LCE2AQ5TA79 106 aaPredicted RBP2.98□□□□□ -1.93
PAX6-231ENST00000606377 LCE5AQ5TCM9 118 aa2.97□□□□□ -1.93
PAX6-231ENST00000606377 KRTAP9-7A8MTY7 169 aa2.97□□□□□ -1.93
PAX6-231ENST00000606377 KRTAP19-7Q3SYF9 63 aa2.93□□□□□ -1.94
PAX6-231ENST00000606377 EPPK1P58107 5090 aaKnown RBP2.92□□□□□ -1.94
PAX6-231ENST00000606377 ABCA13Q86UQ4 5058 aa2.9□□□□□ -1.95
PAX6-231ENST00000606377 MT1AP04731 61 aa2.88□□□□□ -1.95
PAX6-231ENST00000606377 KRTAP4-9Q9BYQ8 210 aa2.88□□□□□ -1.95
PAX6-231ENST00000606377 FAT4Q6V0I7 4981 aa2.88□□□□□ -1.95
PAX6-231ENST00000606377 HMCN2Q8NDA2 5059 aa2.87□□□□□ -1.95
PAX6-231ENST00000606377 KRTAP2-3P0C7H8 128 aa2.84□□□□□ -1.96
PAX6-231ENST00000606377 KRTAP2-4Q9BYR9 128 aa2.84□□□□□ -1.96
PAX6-231ENST00000606377 KRTAP2-1Q9BYU5 128 aa2.84□□□□□ -1.96
PAX6-231ENST00000606377 LCE1CQ5T751 118 aa2.83□□□□□ -1.96
PAX6-231ENST00000606377 LCE1EQ5T753 118 aa2.83□□□□□ -1.96
PAX6-231ENST00000606377 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
PAX6-231ENST00000606377 LCE1AQ5T7P2 110 aa2.83□□□□□ -1.96
PAX6-231ENST00000606377 FSIP2Q5CZC0 6907 aa2.83□□□□□ -1.96
PAX6-231ENST00000606377 SYNE2Q8WXH0 6885 aaKnown RBP2.81□□□□□ -1.96
PAX6-231ENST00000606377 RNF213Q63HN8 5207 aa2.81□□□□□ -1.96
PAX6-231ENST00000606377 KRTAP6-3Q3LI67 103 aa2.77□□□□□ -1.97
PAX6-231ENST00000606377 KRTAP6-1Q3LI64 71 aa2.74□□□□□ -1.97
PAX6-231ENST00000606377 KRTAP6-2Q3LI66 62 aa2.74□□□□□ -1.97
PAX6-231ENST00000606377 UBR4Q5T4S7 5183 aa2.72□□□□□ -1.97
PAX6-231ENST00000606377 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.72□□□□□ -1.97
PAX6-231ENST00000606377 KRTAP9-4Q9BYQ2 154 aa2.7□□□□□ -1.98
PAX6-231ENST00000606377 MUC2Q02817 5179 aa2.69□□□□□ -1.98
PAX6-231ENST00000606377 KRTAP9-6A8MVA2 160 aa2.67□□□□□ -1.98
PAX6-231ENST00000606377 KRTAP2-2Q9BYT5 123 aa2.67□□□□□ -1.98
PAX6-231ENST00000606377 LCE4AQ5TA78 99 aa2.67□□□□□ -1.98
PAX6-231ENST00000606377 SYNE1Q8NF91 8797 aaKnown RBP2.58□□□□□ -2
PAX6-231ENST00000606377 KRTAP9-9Q9BYP9 154 aa2.56□□□□□ -2
PAX6-231ENST00000606377 USH2AO75445 5202 aa2.51□□□□□ -2.01
PAX6-231ENST00000606377 OBSCNQ5VST9 7968 aa2.48□□□□□ -2.01
PAX6-231ENST00000606377 KMT2DO14686 5537 aa2.35□□□□□ -2.03
PAX6-231ENST00000606377 KRTAP4-6Q9BYQ5 205 aa2.31□□□□□ -2.04
PAX6-231ENST00000606377 KRTAP5-9P26371 169 aa2.31□□□□□ -2.04
PAX6-231ENST00000606377 FCGBPQ9Y6R7 5405 aaPredicted RBP2.3□□□□□ -2.04
PAX6-231ENST00000606377 MACF1Q9UPN3 7388 aaKnown RBP2.29□□□□□ -2.04
PAX6-231ENST00000606377 KRTAP20-2Q3LI61 65 aa2.26□□□□□ -2.05
PAX6-231ENST00000606377 NEBP20929 6669 aa2.24□□□□□ -2.05
PAX6-231ENST00000606377 SSPOA2VEC9 5147 aa2.23□□□□□ -2.05
PAX6-231ENST00000606377 KRTAP4-11Q9BYQ6 195 aa2.22□□□□□ -2.05
PAX6-231ENST00000606377 DSTQ03001 7570 aaKnown RBP2.22□□□□□ -2.05
PAX6-231ENST00000606377 KRTAP4-12Q9BQ66 201 aa2.17□□□□□ -2.06
PAX6-231ENST00000606377 KRTAP4-2Q9BYR5 136 aa2.17□□□□□ -2.06
PAX6-231ENST00000606377 MDN1Q9NU22 5596 aa2.13□□□□□ -2.07
PAX6-231ENST00000606377 KRTAP4-4Q9BYR3 166 aa2.12□□□□□ -2.07
PAX6-231ENST00000606377 KRTAP5-4Q6L8H1 288 aa2.08□□□□□ -2.08
PAX6-231ENST00000606377 MUC12Q9UKN1 5478 aa2.07□□□□□ -2.08
PAX6-231ENST00000606377 KRTAP5-5Q701N2 237 aaPredicted RBP1.96□□□□□ -2.1
PAX6-231ENST00000606377 GPR98Q8WXG9 6306 aa1.89□□□□□ -2.11
PAX6-231ENST00000606377 MUC19Q7Z5P9 8384 aa1.84□□□□□ -2.12
PAX6-231ENST00000606377 KRTAP5-3Q6L8H2 238 aa1.8□□□□□ -2.12
PAX6-231ENST00000606377 HMCN1Q96RW7 5635 aa1.8□□□□□ -2.12
PAX6-231ENST00000606377 AHNAK2Q8IVF2 5795 aa1.77□□□□□ -2.13
PAX6-231ENST00000606377 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
PAX6-231ENST00000606377 MUC5ACP98088 5654 aa1.69□□□□□ -2.14
PAX6-231ENST00000606377 KRTAP5-8O75690 187 aa1.68□□□□□ -2.14
PAX6-231ENST00000606377 AHNAKQ09666 5890 aaKnown RBP1.6□□□□□ -2.15
PAX6-231ENST00000606377 MUC5BQ9HC84 5762 aaPredicted RBP1.59□□□□□ -2.15
PAX6-231ENST00000606377 KRTAP5-10Q6L8G5 202 aa1.57□□□□□ -2.16
PAX6-231ENST00000606377 KRTAP5-2Q701N4 177 aa1.56□□□□□ -2.16
PAX6-231ENST00000606377 KRTAP5-1Q6L8H4 278 aa1.43□□□□□ -2.18
PAX6-231ENST00000606377 KRTAP5-11Q6L8G4 156 aa1.41□□□□□ -2.18
PAX6-231ENST00000606377 KRTAP21-2Q3LI59 83 aa1.36□□□□□ -2.19
PAX6-231ENST00000606377 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.36□□□□□ -2.19
PAX6-231ENST00000606377 KRTAP5-7Q6L8G8 165 aa1.28□□□□□ -2.2
PAX6-231ENST00000606377 KRTAP21-1Q3LI58 79 aa1.19□□□□□ -2.22
PAX6-231ENST00000606377 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 191.1 ms