RNA–Protein interactions for RNA: ENST00000600237.5

SYMPK-215, Transcript of symplekin, humanhuman

TSL 5

Gene SYMPK, Length 5,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-215ENST00000600237 KRTAP4-7Q9BYR0 210 aa4.65□□□□□ -1.67
SYMPK-215ENST00000600237 LCE2DQ5TA82 110 aaPredicted RBP4.63□□□□□ -1.67
SYMPK-215ENST00000600237 UBR4Q5T4S7 5183 aa4.61□□□□□ -1.67
SYMPK-215ENST00000600237 FAT4Q6V0I7 4981 aa4.59□□□□□ -1.67
SYMPK-215ENST00000600237 RNF213Q63HN8 5207 aa4.58□□□□□ -1.68
SYMPK-215ENST00000600237 MT1MQ8N339 61 aa4.54□□□□□ -1.68
SYMPK-215ENST00000600237 KRTAP9-6A0A140TA67 174 aa4.47□□□□□ -1.69
SYMPK-215ENST00000600237 MT3P25713 68 aa4.46□□□□□ -1.7
SYMPK-215ENST00000600237 FSIP2Q5CZC0 6907 aa4.44□□□□□ -1.7
SYMPK-215ENST00000600237 HMCN2Q8NDA2 5059 aa4.4□□□□□ -1.71
SYMPK-215ENST00000600237 MT4P47944 62 aa4.38□□□□□ -1.71
SYMPK-215ENST00000600237 KRTAP19-7Q3SYF9 63 aa4.37□□□□□ -1.71
SYMPK-215ENST00000600237 LOC100996750A0A140TA64 210 aa4.35□□□□□ -1.71
SYMPK-215ENST00000600237 KRTAP4-3Q9BYR4 195 aa4.34□□□□□ -1.71
SYMPK-215ENST00000600237 PRM1P04553 51 aa4.33□□□□□ -1.72
SYMPK-215ENST00000600237 MUC2Q02817 5179 aa4.27□□□□□ -1.73
SYMPK-215ENST00000600237 KRTAP2-3P0C7H8 128 aa4.27□□□□□ -1.73
SYMPK-215ENST00000600237 KRTAP2-4Q9BYR9 128 aa4.27□□□□□ -1.73
SYMPK-215ENST00000600237 KRTAP2-1Q9BYU5 128 aa4.27□□□□□ -1.73
SYMPK-215ENST00000600237 MT1AP04731 61 aa4.26□□□□□ -1.73
SYMPK-215ENST00000600237 KRTAP9-7A8MTY7 169 aa4.21□□□□□ -1.74
SYMPK-215ENST00000600237 KRTAP6-3Q3LI67 103 aa4.21□□□□□ -1.74
SYMPK-215ENST00000600237 LCE1AQ5T7P2 110 aa4.2□□□□□ -1.74
SYMPK-215ENST00000600237 KRTAP20-1Q3LI63 56 aa4.17□□□□□ -1.74
SYMPK-215ENST00000600237 OBSCNQ5VST9 7968 aa4.14□□□□□ -1.75
SYMPK-215ENST00000600237 SYNE2Q8WXH0 6885 aaKnown RBP4.11□□□□□ -1.75
SYMPK-215ENST00000600237 LCE1DQ5T752 114 aa4.11□□□□□ -1.75
SYMPK-215ENST00000600237 LCE1BQ5T7P3 118 aa4.11□□□□□ -1.75
SYMPK-215ENST00000600237 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.1□□□□□ -1.75
SYMPK-215ENST00000600237 KRTAP4-9Q9BYQ8 210 aa4.06□□□□□ -1.76
SYMPK-215ENST00000600237 KRTAP9-6A8MVA2 160 aa4.03□□□□□ -1.76
SYMPK-215ENST00000600237 LCE5AQ5TCM9 118 aa4.03□□□□□ -1.76
SYMPK-215ENST00000600237 LCE4AQ5TA78 99 aa3.94□□□□□ -1.78
SYMPK-215ENST00000600237 KRTAP6-1Q3LI64 71 aa3.94□□□□□ -1.78
SYMPK-215ENST00000600237 KRTAP2-2Q9BYT5 123 aa3.93□□□□□ -1.78
SYMPK-215ENST00000600237 KRTAP9-4Q9BYQ2 154 aa3.88□□□□□ -1.79
SYMPK-215ENST00000600237 KRTAP6-2Q3LI66 62 aa3.87□□□□□ -1.79
SYMPK-215ENST00000600237 USH2AO75445 5202 aa3.85□□□□□ -1.79
SYMPK-215ENST00000600237 FCGBPQ9Y6R7 5405 aaPredicted RBP3.77□□□□□ -1.81
SYMPK-215ENST00000600237 DSTQ03001 7570 aaKnown RBP3.64□□□□□ -1.83
SYMPK-215ENST00000600237 KRTAP5-9P26371 169 aa3.64□□□□□ -1.83
SYMPK-215ENST00000600237 MACF1Q9UPN3 7388 aaKnown RBP3.58□□□□□ -1.84
SYMPK-215ENST00000600237 KMT2DO14686 5537 aa3.56□□□□□ -1.84
SYMPK-215ENST00000600237 SSPOA2VEC9 5147 aa3.53□□□□□ -1.84
SYMPK-215ENST00000600237 NEBP20929 6669 aa3.53□□□□□ -1.84
SYMPK-215ENST00000600237 LCE1CQ5T751 118 aa3.45□□□□□ -1.86
SYMPK-215ENST00000600237 LCE1EQ5T753 118 aa3.45□□□□□ -1.86
SYMPK-215ENST00000600237 LCE1FQ5T754 118 aa3.45□□□□□ -1.86
SYMPK-215ENST00000600237 KRTAP9-9Q9BYP9 154 aa3.38□□□□□ -1.87
SYMPK-215ENST00000600237 MUC12Q9UKN1 5478 aa3.37□□□□□ -1.87
SYMPK-215ENST00000600237 MUC19Q7Z5P9 8384 aa3.37□□□□□ -1.87
SYMPK-215ENST00000600237 MDN1Q9NU22 5596 aa3.36□□□□□ -1.87
SYMPK-215ENST00000600237 KRTAP4-6Q9BYQ5 205 aa3.35□□□□□ -1.87
SYMPK-215ENST00000600237 KRTAP20-2Q3LI61 65 aa3.33□□□□□ -1.88
SYMPK-215ENST00000600237 KRTAP4-11Q9BYQ6 195 aa3.17□□□□□ -1.9
SYMPK-215ENST00000600237 GPR98Q8WXG9 6306 aa3.15□□□□□ -1.9
SYMPK-215ENST00000600237 KRTAP5-4Q6L8H1 288 aa3.13□□□□□ -1.91
SYMPK-215ENST00000600237 KRTAP5-5Q701N2 237 aaPredicted RBP3□□□□□ -1.93
SYMPK-215ENST00000600237 KRTAP4-12Q9BQ66 201 aa2.87□□□□□ -1.95
SYMPK-215ENST00000600237 KRTAP4-2Q9BYR5 136 aa2.87□□□□□ -1.95
SYMPK-215ENST00000600237 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
SYMPK-215ENST00000600237 KRTAP5-3Q6L8H2 238 aa2.78□□□□□ -1.96
SYMPK-215ENST00000600237 MUC5ACP98088 5654 aa2.74□□□□□ -1.97
SYMPK-215ENST00000600237 AHNAK2Q8IVF2 5795 aa2.67□□□□□ -1.98
SYMPK-215ENST00000600237 HMCN1Q96RW7 5635 aa2.67□□□□□ -1.98
SYMPK-215ENST00000600237 KRTAP5-8O75690 187 aa2.53□□□□□ -2
SYMPK-215ENST00000600237 KRTAP5-2Q701N4 177 aa2.5□□□□□ -2.01
SYMPK-215ENST00000600237 KRTAP5-10Q6L8G5 202 aa2.43□□□□□ -2.02
SYMPK-215ENST00000600237 MUC5BQ9HC84 5762 aaPredicted RBP2.27□□□□□ -2.05
SYMPK-215ENST00000600237 AHNAKQ09666 5890 aaKnown RBP2.22□□□□□ -2.05
SYMPK-215ENST00000600237 KRTAP5-11Q6L8G4 156 aa2.21□□□□□ -2.06
SYMPK-215ENST00000600237 KRTAP5-1Q6L8H4 278 aa2.19□□□□□ -2.06
SYMPK-215ENST00000600237 PHGR1C9JFL3 82 aa2.19□□□□□ -2.06
SYMPK-215ENST00000600237 KRTAP21-2Q3LI59 83 aa2.05□□□□□ -2.08
SYMPK-215ENST00000600237 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.98□□□□□ -2.09
SYMPK-215ENST00000600237 KRTAP5-7Q6L8G8 165 aa1.93□□□□□ -2.1
SYMPK-215ENST00000600237 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
SYMPK-215ENST00000600237 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 79 ms