RNA–Protein interactions for RNA: ENST00000585058.1

RAB11FIP4-210, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 2

Gene RAB11FIP4, Length 5,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-210ENST00000585058 MT3P25713 68 aa4.1□□□□□ -1.75
RAB11FIP4-210ENST00000585058 LOC100996750A0A140TA64 210 aa4.08□□□□□ -1.76
RAB11FIP4-210ENST00000585058 MT1MQ8N339 61 aa4.08□□□□□ -1.76
RAB11FIP4-210ENST00000585058 UBR4Q5T4S7 5183 aa4.06□□□□□ -1.76
RAB11FIP4-210ENST00000585058 LCE1BQ5T7P3 118 aa4.05□□□□□ -1.76
RAB11FIP4-210ENST00000585058 FAT4Q6V0I7 4981 aa4.04□□□□□ -1.76
RAB11FIP4-210ENST00000585058 KRTAP4-3Q9BYR4 195 aa4.01□□□□□ -1.77
RAB11FIP4-210ENST00000585058 LCE1DQ5T752 114 aa4.01□□□□□ -1.77
RAB11FIP4-210ENST00000585058 RNF213Q63HN8 5207 aa4.01□□□□□ -1.77
RAB11FIP4-210ENST00000585058 LCE2AQ5TA79 106 aaPredicted RBP4□□□□□ -1.77
RAB11FIP4-210ENST00000585058 KRTAP19-6Q3LI70 58 aa3.98□□□□□ -1.77
RAB11FIP4-210ENST00000585058 HMCN2Q8NDA2 5059 aa3.97□□□□□ -1.77
RAB11FIP4-210ENST00000585058 KRTAP9-2Q9BYQ4 174 aa3.94□□□□□ -1.78
RAB11FIP4-210ENST00000585058 SYNE1Q8NF91 8797 aaKnown RBP3.93□□□□□ -1.78
RAB11FIP4-210ENST00000585058 MUC2Q02817 5179 aa3.87□□□□□ -1.79
RAB11FIP4-210ENST00000585058 KRTAP4-9Q9BYQ8 210 aa3.85□□□□□ -1.79
RAB11FIP4-210ENST00000585058 FSIP2Q5CZC0 6907 aa3.82□□□□□ -1.8
RAB11FIP4-210ENST00000585058 MT1AP04731 61 aa3.8□□□□□ -1.8
RAB11FIP4-210ENST00000585058 LCE5AQ5TCM9 118 aa3.77□□□□□ -1.81
RAB11FIP4-210ENST00000585058 KRTAP19-7Q3SYF9 63 aa3.77□□□□□ -1.81
RAB11FIP4-210ENST00000585058 KRTAP2-3P0C7H8 128 aa3.76□□□□□ -1.81
RAB11FIP4-210ENST00000585058 KRTAP2-4Q9BYR9 128 aa3.76□□□□□ -1.81
RAB11FIP4-210ENST00000585058 KRTAP2-1Q9BYU5 128 aa3.76□□□□□ -1.81
RAB11FIP4-210ENST00000585058 KRTAP9-6A0A140TA67 174 aa3.73□□□□□ -1.81
RAB11FIP4-210ENST00000585058 KRTAP20-1Q3LI63 56 aa3.66□□□□□ -1.82
RAB11FIP4-210ENST00000585058 SYNE2Q8WXH0 6885 aaKnown RBP3.66□□□□□ -1.82
RAB11FIP4-210ENST00000585058 KRTAP6-2Q3LI66 62 aa3.59□□□□□ -1.83
RAB11FIP4-210ENST00000585058 KRTAP6-1Q3LI64 71 aa3.57□□□□□ -1.84
RAB11FIP4-210ENST00000585058 OBSCNQ5VST9 7968 aa3.54□□□□□ -1.84
RAB11FIP4-210ENST00000585058 LCE1CQ5T751 118 aa3.52□□□□□ -1.85
RAB11FIP4-210ENST00000585058 LCE1EQ5T753 118 aa3.52□□□□□ -1.85
RAB11FIP4-210ENST00000585058 LCE1FQ5T754 118 aa3.52□□□□□ -1.85
RAB11FIP4-210ENST00000585058 LCE1AQ5T7P2 110 aa3.52□□□□□ -1.85
RAB11FIP4-210ENST00000585058 KRTAP6-3Q3LI67 103 aa3.51□□□□□ -1.85
RAB11FIP4-210ENST00000585058 KRTAP9-7A8MTY7 169 aa3.5□□□□□ -1.85
RAB11FIP4-210ENST00000585058 KRTAP9-4Q9BYQ2 154 aa3.5□□□□□ -1.85
RAB11FIP4-210ENST00000585058 KRTAP9-6A8MVA2 160 aa3.49□□□□□ -1.85
RAB11FIP4-210ENST00000585058 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.43□□□□□ -1.86
RAB11FIP4-210ENST00000585058 LCE4AQ5TA78 99 aa3.4□□□□□ -1.87
RAB11FIP4-210ENST00000585058 USH2AO75445 5202 aa3.37□□□□□ -1.87
RAB11FIP4-210ENST00000585058 KMT2DO14686 5537 aa3.34□□□□□ -1.87
RAB11FIP4-210ENST00000585058 KRTAP2-2Q9BYT5 123 aa3.3□□□□□ -1.88
RAB11FIP4-210ENST00000585058 MACF1Q9UPN3 7388 aaKnown RBP3.24□□□□□ -1.89
RAB11FIP4-210ENST00000585058 DSTQ03001 7570 aaKnown RBP3.22□□□□□ -1.89
RAB11FIP4-210ENST00000585058 SSPOA2VEC9 5147 aa3.22□□□□□ -1.89
RAB11FIP4-210ENST00000585058 FCGBPQ9Y6R7 5405 aaPredicted RBP3.19□□□□□ -1.9
RAB11FIP4-210ENST00000585058 KRTAP9-9Q9BYP9 154 aa3.15□□□□□ -1.9
RAB11FIP4-210ENST00000585058 GPR98Q8WXG9 6306 aa3.14□□□□□ -1.91
RAB11FIP4-210ENST00000585058 KRTAP5-9P26371 169 aa3.09□□□□□ -1.92
RAB11FIP4-210ENST00000585058 KRTAP4-11Q9BYQ6 195 aa3.05□□□□□ -1.92
RAB11FIP4-210ENST00000585058 MUC12Q9UKN1 5478 aa3.02□□□□□ -1.93
RAB11FIP4-210ENST00000585058 MDN1Q9NU22 5596 aa3.01□□□□□ -1.93
RAB11FIP4-210ENST00000585058 NEBP20929 6669 aa3□□□□□ -1.93
RAB11FIP4-210ENST00000585058 MUC19Q7Z5P9 8384 aa2.96□□□□□ -1.94
RAB11FIP4-210ENST00000585058 KRTAP4-6Q9BYQ5 205 aa2.89□□□□□ -1.95
RAB11FIP4-210ENST00000585058 KRTAP20-2Q3LI61 65 aa2.83□□□□□ -1.96
RAB11FIP4-210ENST00000585058 KRTAP4-4Q9BYR3 166 aa2.82□□□□□ -1.96
RAB11FIP4-210ENST00000585058 KRTAP4-12Q9BQ66 201 aa2.75□□□□□ -1.97
RAB11FIP4-210ENST00000585058 KRTAP4-2Q9BYR5 136 aa2.75□□□□□ -1.97
RAB11FIP4-210ENST00000585058 KRTAP5-5Q701N2 237 aaPredicted RBP2.68□□□□□ -1.98
RAB11FIP4-210ENST00000585058 KRTAP5-4Q6L8H1 288 aa2.64□□□□□ -1.99
RAB11FIP4-210ENST00000585058 MUC5ACP98088 5654 aa2.33□□□□□ -2.04
RAB11FIP4-210ENST00000585058 KRTAP5-3Q6L8H2 238 aa2.32□□□□□ -2.04
RAB11FIP4-210ENST00000585058 HMCN1Q96RW7 5635 aa2.29□□□□□ -2.04
RAB11FIP4-210ENST00000585058 AHNAK2Q8IVF2 5795 aa2.28□□□□□ -2.05
RAB11FIP4-210ENST00000585058 KRTAP5-2Q701N4 177 aa2.2□□□□□ -2.06
RAB11FIP4-210ENST00000585058 KRTAP5-8O75690 187 aa2.13□□□□□ -2.07
RAB11FIP4-210ENST00000585058 PHGR1C9JFL3 82 aa2.06□□□□□ -2.08
RAB11FIP4-210ENST00000585058 KRTAP5-10Q6L8G5 202 aa2.06□□□□□ -2.08
RAB11FIP4-210ENST00000585058 KRTAP5-1Q6L8H4 278 aa1.94□□□□□ -2.1
RAB11FIP4-210ENST00000585058 MUC5BQ9HC84 5762 aaPredicted RBP1.93□□□□□ -2.1
RAB11FIP4-210ENST00000585058 AHNAKQ09666 5890 aaKnown RBP1.87□□□□□ -2.11
RAB11FIP4-210ENST00000585058 KRTAP5-11Q6L8G4 156 aa1.86□□□□□ -2.11
RAB11FIP4-210ENST00000585058 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
RAB11FIP4-210ENST00000585058 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.69□□□□□ -2.14
RAB11FIP4-210ENST00000585058 KRTAP5-7Q6L8G8 165 aa1.66□□□□□ -2.14
RAB11FIP4-210ENST00000585058 KRTAP21-1Q3LI58 79 aa1.62□□□□□ -2.15
RAB11FIP4-210ENST00000585058 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 419.2 ms