RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 EPPK1P58107 5090 aaKnown RBP4.73□□□□□ -1.65
ITGB4-206ENST00000579662 MT3P25713 68 aa4.71□□□□□ -1.66
ITGB4-206ENST00000579662 FAT4Q6V0I7 4981 aa4.62□□□□□ -1.67
ITGB4-206ENST00000579662 RNF213Q63HN8 5207 aa4.62□□□□□ -1.67
ITGB4-206ENST00000579662 KRTAP19-7Q3SYF9 63 aa4.61□□□□□ -1.67
ITGB4-206ENST00000579662 LOC100996750A0A140TA64 210 aa4.58□□□□□ -1.68
ITGB4-206ENST00000579662 MT4P47944 62 aa4.57□□□□□ -1.68
ITGB4-206ENST00000579662 KRTAP4-3Q9BYR4 195 aa4.56□□□□□ -1.68
ITGB4-206ENST00000579662 MT1AP04731 61 aa4.52□□□□□ -1.69
ITGB4-206ENST00000579662 KRTAP9-6A0A140TA67 174 aa4.51□□□□□ -1.69
ITGB4-206ENST00000579662 HMCN2Q8NDA2 5059 aa4.48□□□□□ -1.69
ITGB4-206ENST00000579662 PRM1P04553 51 aa4.41□□□□□ -1.7
ITGB4-206ENST00000579662 LCE1AQ5T7P2 110 aa4.4□□□□□ -1.7
ITGB4-206ENST00000579662 UBR4Q5T4S7 5183 aa4.39□□□□□ -1.71
ITGB4-206ENST00000579662 KRTAP2-3P0C7H8 128 aa4.39□□□□□ -1.71
ITGB4-206ENST00000579662 KRTAP2-4Q9BYR9 128 aa4.39□□□□□ -1.71
ITGB4-206ENST00000579662 KRTAP2-1Q9BYU5 128 aa4.39□□□□□ -1.71
ITGB4-206ENST00000579662 KRTAP6-3Q3LI67 103 aa4.35□□□□□ -1.71
ITGB4-206ENST00000579662 LCE1DQ5T752 114 aa4.34□□□□□ -1.71
ITGB4-206ENST00000579662 LCE1BQ5T7P3 118 aa4.33□□□□□ -1.72
ITGB4-206ENST00000579662 KRTAP20-1Q3LI63 56 aa4.3□□□□□ -1.72
ITGB4-206ENST00000579662 KRTAP9-7A8MTY7 169 aa4.24□□□□□ -1.73
ITGB4-206ENST00000579662 LCE5AQ5TCM9 118 aa4.24□□□□□ -1.73
ITGB4-206ENST00000579662 KRTAP4-9Q9BYQ8 210 aa4.19□□□□□ -1.74
ITGB4-206ENST00000579662 LCE4AQ5TA78 99 aa4.17□□□□□ -1.74
ITGB4-206ENST00000579662 FSIP2Q5CZC0 6907 aa4.17□□□□□ -1.74
ITGB4-206ENST00000579662 KRTAP6-1Q3LI64 71 aa4.17□□□□□ -1.74
ITGB4-206ENST00000579662 KRTAP9-4Q9BYQ2 154 aa4.16□□□□□ -1.74
ITGB4-206ENST00000579662 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.15□□□□□ -1.74
ITGB4-206ENST00000579662 MUC2Q02817 5179 aa4.14□□□□□ -1.75
ITGB4-206ENST00000579662 KRTAP9-6A8MVA2 160 aa4.13□□□□□ -1.75
ITGB4-206ENST00000579662 KRTAP6-2Q3LI66 62 aa4.1□□□□□ -1.75
ITGB4-206ENST00000579662 SYNE2Q8WXH0 6885 aaKnown RBP4.09□□□□□ -1.75
ITGB4-206ENST00000579662 SYNE1Q8NF91 8797 aaKnown RBP4.07□□□□□ -1.76
ITGB4-206ENST00000579662 KRTAP2-2Q9BYT5 123 aa4.05□□□□□ -1.76
ITGB4-206ENST00000579662 OBSCNQ5VST9 7968 aa3.84□□□□□ -1.79
ITGB4-206ENST00000579662 USH2AO75445 5202 aa3.82□□□□□ -1.8
ITGB4-206ENST00000579662 KRTAP5-9P26371 169 aa3.76□□□□□ -1.81
ITGB4-206ENST00000579662 LCE1CQ5T751 118 aa3.65□□□□□ -1.82
ITGB4-206ENST00000579662 LCE1EQ5T753 118 aa3.65□□□□□ -1.82
ITGB4-206ENST00000579662 LCE1FQ5T754 118 aa3.65□□□□□ -1.82
ITGB4-206ENST00000579662 SSPOA2VEC9 5147 aa3.59□□□□□ -1.84
ITGB4-206ENST00000579662 NEBP20929 6669 aa3.58□□□□□ -1.84
ITGB4-206ENST00000579662 KRTAP9-9Q9BYP9 154 aa3.54□□□□□ -1.84
ITGB4-206ENST00000579662 MACF1Q9UPN3 7388 aaKnown RBP3.52□□□□□ -1.85
ITGB4-206ENST00000579662 FCGBPQ9Y6R7 5405 aaPredicted RBP3.51□□□□□ -1.85
ITGB4-206ENST00000579662 KRTAP20-2Q3LI61 65 aa3.48□□□□□ -1.85
ITGB4-206ENST00000579662 KMT2DO14686 5537 aa3.44□□□□□ -1.86
ITGB4-206ENST00000579662 KRTAP4-6Q9BYQ5 205 aa3.44□□□□□ -1.86
ITGB4-206ENST00000579662 DSTQ03001 7570 aaKnown RBP3.36□□□□□ -1.87
ITGB4-206ENST00000579662 KRTAP5-4Q6L8H1 288 aa3.31□□□□□ -1.88
ITGB4-206ENST00000579662 MUC12Q9UKN1 5478 aa3.24□□□□□ -1.89
ITGB4-206ENST00000579662 KRTAP4-11Q9BYQ6 195 aa3.22□□□□□ -1.89
ITGB4-206ENST00000579662 MDN1Q9NU22 5596 aa3.18□□□□□ -1.9
ITGB4-206ENST00000579662 KRTAP5-5Q701N2 237 aaPredicted RBP3.17□□□□□ -1.9
ITGB4-206ENST00000579662 KRTAP4-4Q9BYR3 166 aa2.97□□□□□ -1.93
ITGB4-206ENST00000579662 KRTAP4-12Q9BQ66 201 aa2.96□□□□□ -1.94
ITGB4-206ENST00000579662 KRTAP4-2Q9BYR5 136 aa2.96□□□□□ -1.94
ITGB4-206ENST00000579662 GPR98Q8WXG9 6306 aa2.95□□□□□ -1.94
ITGB4-206ENST00000579662 MUC19Q7Z5P9 8384 aa2.91□□□□□ -1.94
ITGB4-206ENST00000579662 KRTAP5-3Q6L8H2 238 aa2.87□□□□□ -1.95
ITGB4-206ENST00000579662 MUC5ACP98088 5654 aa2.64□□□□□ -1.99
ITGB4-206ENST00000579662 KRTAP5-2Q701N4 177 aa2.63□□□□□ -1.99
ITGB4-206ENST00000579662 AHNAK2Q8IVF2 5795 aa2.63□□□□□ -1.99
ITGB4-206ENST00000579662 KRTAP5-8O75690 187 aa2.57□□□□□ -2
ITGB4-206ENST00000579662 HMCN1Q96RW7 5635 aa2.55□□□□□ -2
ITGB4-206ENST00000579662 KRTAP5-10Q6L8G5 202 aa2.51□□□□□ -2.01
ITGB4-206ENST00000579662 MUC5BQ9HC84 5762 aaPredicted RBP2.35□□□□□ -2.03
ITGB4-206ENST00000579662 KRTAP5-11Q6L8G4 156 aa2.34□□□□□ -2.03
ITGB4-206ENST00000579662 KRTAP5-1Q6L8H4 278 aa2.26□□□□□ -2.05
ITGB4-206ENST00000579662 PHGR1C9JFL3 82 aa2.25□□□□□ -2.05
ITGB4-206ENST00000579662 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
ITGB4-206ENST00000579662 AHNAKQ09666 5890 aaKnown RBP2.16□□□□□ -2.06
ITGB4-206ENST00000579662 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.12□□□□□ -2.07
ITGB4-206ENST00000579662 KRTAP21-1Q3LI58 79 aa1.94□□□□□ -2.1
ITGB4-206ENST00000579662 KRTAP5-7Q6L8G8 165 aa1.93□□□□□ -2.1
ITGB4-206ENST00000579662 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 21.2 ms