RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 SPRR2BP35325 72 aa3.22□□□□□ -1.89
PTPRM-205ENST00000577827 SPRR2AP35326 72 aa3.22□□□□□ -1.89
PTPRM-205ENST00000577827 FAT4Q6V0I7 4981 aa3.18□□□□□ -1.9
PTPRM-205ENST00000577827 LCE2DQ5TA82 110 aaPredicted RBP3.18□□□□□ -1.9
PTPRM-205ENST00000577827 KRTAP19-6Q3LI70 58 aa3.18□□□□□ -1.9
PTPRM-205ENST00000577827 UBR4Q5T4S7 5183 aa3.16□□□□□ -1.9
PTPRM-205ENST00000577827 RNF213Q63HN8 5207 aa3.15□□□□□ -1.9
PTPRM-205ENST00000577827 LOC100996750A0A140TA64 210 aa3.12□□□□□ -1.91
PTPRM-205ENST00000577827 KRTAP9-6A8MVA2 160 aa3.12□□□□□ -1.91
PTPRM-205ENST00000577827 SPRR2DP22532 72 aa3.11□□□□□ -1.91
PTPRM-205ENST00000577827 SYNE1Q8NF91 8797 aaKnown RBP3.11□□□□□ -1.91
PTPRM-205ENST00000577827 LCE2AQ5TA79 106 aaPredicted RBP3.09□□□□□ -1.91
PTPRM-205ENST00000577827 PRM1P04553 51 aa3.09□□□□□ -1.92
PTPRM-205ENST00000577827 KRTAP4-3Q9BYR4 195 aa3.09□□□□□ -1.92
PTPRM-205ENST00000577827 MUC2Q02817 5179 aa3.06□□□□□ -1.92
PTPRM-205ENST00000577827 MT3P25713 68 aa3.05□□□□□ -1.92
PTPRM-205ENST00000577827 MT1AP04731 61 aa3.04□□□□□ -1.92
PTPRM-205ENST00000577827 FSIP2Q5CZC0 6907 aa2.95□□□□□ -1.94
PTPRM-205ENST00000577827 KRTAP4-9Q9BYQ8 210 aa2.91□□□□□ -1.94
PTPRM-205ENST00000577827 OBSCNQ5VST9 7968 aa2.91□□□□□ -1.94
PTPRM-205ENST00000577827 LCE5AQ5TCM9 118 aa2.88□□□□□ -1.95
PTPRM-205ENST00000577827 KRTAP6-1Q3LI64 71 aa2.84□□□□□ -1.95
PTPRM-205ENST00000577827 LCE1AQ5T7P2 110 aa2.8□□□□□ -1.96
PTPRM-205ENST00000577827 KRTAP6-2Q3LI66 62 aa2.79□□□□□ -1.96
PTPRM-205ENST00000577827 KRTAP9-4Q9BYQ2 154 aa2.77□□□□□ -1.97
PTPRM-205ENST00000577827 KRTAP9-2Q9BYQ4 174 aa2.76□□□□□ -1.97
PTPRM-205ENST00000577827 KRTAP9-7A8MTY7 169 aa2.73□□□□□ -1.97
PTPRM-205ENST00000577827 FCGBPQ9Y6R7 5405 aaPredicted RBP2.71□□□□□ -1.98
PTPRM-205ENST00000577827 USH2AO75445 5202 aa2.71□□□□□ -1.98
PTPRM-205ENST00000577827 MT4P47944 62 aa2.7□□□□□ -1.98
PTPRM-205ENST00000577827 DSTQ03001 7570 aaKnown RBP2.69□□□□□ -1.98
PTPRM-205ENST00000577827 LCE1DQ5T752 114 aa2.68□□□□□ -1.98
PTPRM-205ENST00000577827 LCE1BQ5T7P3 118 aa2.66□□□□□ -1.98
PTPRM-205ENST00000577827 LCE1EQ5T753 118 aa2.65□□□□□ -1.99
PTPRM-205ENST00000577827 SYNE2Q8WXH0 6885 aaKnown RBP2.64□□□□□ -1.99
PTPRM-205ENST00000577827 KMT2DO14686 5537 aa2.63□□□□□ -1.99
PTPRM-205ENST00000577827 KRTAP2-2Q9BYT5 123 aa2.62□□□□□ -1.99
PTPRM-205ENST00000577827 KRTAP9-6A0A140TA67 174 aa2.6□□□□□ -1.99
PTPRM-205ENST00000577827 KRTAP6-3Q3LI67 103 aa2.6□□□□□ -1.99
PTPRM-205ENST00000577827 LCE4AQ5TA78 99 aa2.53□□□□□ -2
PTPRM-205ENST00000577827 MUC19Q7Z5P9 8384 aa2.47□□□□□ -2.01
PTPRM-205ENST00000577827 SSPOA2VEC9 5147 aa2.46□□□□□ -2.01
PTPRM-205ENST00000577827 KRTAP5-9P26371 169 aa2.45□□□□□ -2.02
PTPRM-205ENST00000577827 KRTAP4-6Q9BYQ5 205 aa2.44□□□□□ -2.02
PTPRM-205ENST00000577827 MUC12Q9UKN1 5478 aa2.44□□□□□ -2.02
PTPRM-205ENST00000577827 MACF1Q9UPN3 7388 aaKnown RBP2.4□□□□□ -2.02
PTPRM-205ENST00000577827 KRTAP5-5Q701N2 237 aaPredicted RBP2.4□□□□□ -2.03
PTPRM-205ENST00000577827 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.39□□□□□ -2.03
PTPRM-205ENST00000577827 LCE1FQ5T754 118 aa2.37□□□□□ -2.03
PTPRM-205ENST00000577827 KRTAP20-1Q3LI63 56 aa2.31□□□□□ -2.04
PTPRM-205ENST00000577827 KRTAP4-11Q9BYQ6 195 aa2.24□□□□□ -2.05
PTPRM-205ENST00000577827 KRTAP20-2Q3LI61 65 aa2.22□□□□□ -2.05
PTPRM-205ENST00000577827 MDN1Q9NU22 5596 aa2.16□□□□□ -2.06
PTPRM-205ENST00000577827 LCE1CQ5T751 118 aa2.1□□□□□ -2.07
PTPRM-205ENST00000577827 GPR98Q8WXG9 6306 aa2.09□□□□□ -2.07
PTPRM-205ENST00000577827 NEBP20929 6669 aa2.08□□□□□ -2.08
PTPRM-205ENST00000577827 KRTAP5-4Q6L8H1 288 aa2.08□□□□□ -2.08
PTPRM-205ENST00000577827 KRTAP5-3Q6L8H2 238 aa2.02□□□□□ -2.09
PTPRM-205ENST00000577827 KRTAP9-9Q9BYP9 154 aa1.98□□□□□ -2.09
PTPRM-205ENST00000577827 KRTAP4-12Q9BQ66 201 aa1.91□□□□□ -2.1
PTPRM-205ENST00000577827 KRTAP4-4Q9BYR3 166 aa1.89□□□□□ -2.11
PTPRM-205ENST00000577827 KRTAP4-2Q9BYR5 136 aa1.89□□□□□ -2.11
PTPRM-205ENST00000577827 KRTAP5-10Q6L8G5 202 aa1.87□□□□□ -2.11
PTPRM-205ENST00000577827 KRTAP5-2Q701N4 177 aa1.86□□□□□ -2.11
PTPRM-205ENST00000577827 MUC5ACP98088 5654 aa1.84□□□□□ -2.11
PTPRM-205ENST00000577827 HMCN1Q96RW7 5635 aa1.77□□□□□ -2.13
PTPRM-205ENST00000577827 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.68□□□□□ -2.14
PTPRM-205ENST00000577827 AHNAK2Q8IVF2 5795 aa1.64□□□□□ -2.15
PTPRM-205ENST00000577827 KRTAP5-1Q6L8H4 278 aa1.62□□□□□ -2.15
PTPRM-205ENST00000577827 KRTAP5-11Q6L8G4 156 aa1.6□□□□□ -2.15
PTPRM-205ENST00000577827 KRTAP21-2Q3LI59 83 aa1.59□□□□□ -2.16
PTPRM-205ENST00000577827 KRTAP21-1Q3LI58 79 aa1.57□□□□□ -2.16
PTPRM-205ENST00000577827 KRTAP5-8O75690 187 aa1.56□□□□□ -2.16
PTPRM-205ENST00000577827 MUC5BQ9HC84 5762 aaPredicted RBP1.53□□□□□ -2.16
PTPRM-205ENST00000577827 AHNAKQ09666 5890 aaKnown RBP1.51□□□□□ -2.17
PTPRM-205ENST00000577827 KRTAP5-7Q6L8G8 165 aa1.45□□□□□ -2.18
PTPRM-205ENST00000577827 PHGR1C9JFL3 82 aa1.32□□□□□ -2.2
PTPRM-205ENST00000577827 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 662.1 ms