RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 KRTAP19-6Q3LI70 58 aa4.23□□□□□ -1.73
CX3CL1-204ENST00000565912 MT1MQ8N339 61 aa4.21□□□□□ -1.74
CX3CL1-204ENST00000565912 LCE1BQ5T7P3 118 aa4.21□□□□□ -1.74
CX3CL1-204ENST00000565912 LCE2AQ5TA79 106 aaPredicted RBP4.19□□□□□ -1.74
CX3CL1-204ENST00000565912 PRM1P04553 51 aa4.18□□□□□ -1.74
CX3CL1-204ENST00000565912 LOC100996750A0A140TA64 210 aa4.17□□□□□ -1.74
CX3CL1-204ENST00000565912 FAT4Q6V0I7 4981 aa4.17□□□□□ -1.74
CX3CL1-204ENST00000565912 LCE1DQ5T752 114 aa4.16□□□□□ -1.74
CX3CL1-204ENST00000565912 RNF213Q63HN8 5207 aa4.13□□□□□ -1.75
CX3CL1-204ENST00000565912 KRTAP4-3Q9BYR4 195 aa4.13□□□□□ -1.75
CX3CL1-204ENST00000565912 FSIP2Q5CZC0 6907 aa4.06□□□□□ -1.76
CX3CL1-204ENST00000565912 HMCN2Q8NDA2 5059 aa4.04□□□□□ -1.76
CX3CL1-204ENST00000565912 UBR4Q5T4S7 5183 aa4.04□□□□□ -1.76
CX3CL1-204ENST00000565912 SYNE1Q8NF91 8797 aaKnown RBP4.02□□□□□ -1.77
CX3CL1-204ENST00000565912 KRTAP9-6A0A140TA67 174 aa4.01□□□□□ -1.77
CX3CL1-204ENST00000565912 KRTAP19-7Q3SYF9 63 aa3.97□□□□□ -1.77
CX3CL1-204ENST00000565912 LCE5AQ5TCM9 118 aa3.94□□□□□ -1.78
CX3CL1-204ENST00000565912 MT1AP04731 61 aa3.92□□□□□ -1.78
CX3CL1-204ENST00000565912 KRTAP4-9Q9BYQ8 210 aa3.91□□□□□ -1.78
CX3CL1-204ENST00000565912 KRTAP2-3P0C7H8 128 aa3.85□□□□□ -1.79
CX3CL1-204ENST00000565912 KRTAP2-4Q9BYR9 128 aa3.85□□□□□ -1.79
CX3CL1-204ENST00000565912 KRTAP2-1Q9BYU5 128 aa3.85□□□□□ -1.79
CX3CL1-204ENST00000565912 KRTAP20-1Q3LI63 56 aa3.84□□□□□ -1.79
CX3CL1-204ENST00000565912 MUC2Q02817 5179 aa3.83□□□□□ -1.8
CX3CL1-204ENST00000565912 KRTAP9-7A8MTY7 169 aa3.76□□□□□ -1.81
CX3CL1-204ENST00000565912 SYNE2Q8WXH0 6885 aaKnown RBP3.75□□□□□ -1.81
CX3CL1-204ENST00000565912 KRTAP6-3Q3LI67 103 aa3.73□□□□□ -1.81
CX3CL1-204ENST00000565912 KRTAP6-2Q3LI66 62 aa3.7□□□□□ -1.82
CX3CL1-204ENST00000565912 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.68□□□□□ -1.82
CX3CL1-204ENST00000565912 LCE1AQ5T7P2 110 aa3.68□□□□□ -1.82
CX3CL1-204ENST00000565912 KRTAP6-1Q3LI64 71 aa3.67□□□□□ -1.82
CX3CL1-204ENST00000565912 OBSCNQ5VST9 7968 aa3.66□□□□□ -1.82
CX3CL1-204ENST00000565912 LCE1CQ5T751 118 aa3.65□□□□□ -1.83
CX3CL1-204ENST00000565912 LCE1EQ5T753 118 aa3.65□□□□□ -1.83
CX3CL1-204ENST00000565912 LCE1FQ5T754 118 aa3.65□□□□□ -1.83
CX3CL1-204ENST00000565912 KRTAP9-4Q9BYQ2 154 aa3.62□□□□□ -1.83
CX3CL1-204ENST00000565912 KRTAP9-6A8MVA2 160 aa3.59□□□□□ -1.83
CX3CL1-204ENST00000565912 LCE4AQ5TA78 99 aa3.58□□□□□ -1.84
CX3CL1-204ENST00000565912 KRTAP2-2Q9BYT5 123 aa3.52□□□□□ -1.85
CX3CL1-204ENST00000565912 USH2AO75445 5202 aa3.47□□□□□ -1.85
CX3CL1-204ENST00000565912 KMT2DO14686 5537 aa3.35□□□□□ -1.87
CX3CL1-204ENST00000565912 FCGBPQ9Y6R7 5405 aaPredicted RBP3.3□□□□□ -1.88
CX3CL1-204ENST00000565912 MACF1Q9UPN3 7388 aaKnown RBP3.29□□□□□ -1.88
CX3CL1-204ENST00000565912 KRTAP9-9Q9BYP9 154 aa3.26□□□□□ -1.89
CX3CL1-204ENST00000565912 KRTAP5-9P26371 169 aa3.25□□□□□ -1.89
CX3CL1-204ENST00000565912 DSTQ03001 7570 aaKnown RBP3.21□□□□□ -1.9
CX3CL1-204ENST00000565912 SSPOA2VEC9 5147 aa3.2□□□□□ -1.9
CX3CL1-204ENST00000565912 NEBP20929 6669 aa3.11□□□□□ -1.91
CX3CL1-204ENST00000565912 KRTAP4-11Q9BYQ6 195 aa3.09□□□□□ -1.91
CX3CL1-204ENST00000565912 KRTAP4-6Q9BYQ5 205 aa3.09□□□□□ -1.91
CX3CL1-204ENST00000565912 MUC12Q9UKN1 5478 aa3.07□□□□□ -1.92
CX3CL1-204ENST00000565912 KRTAP20-2Q3LI61 65 aa3.01□□□□□ -1.93
CX3CL1-204ENST00000565912 MUC19Q7Z5P9 8384 aa2.98□□□□□ -1.93
CX3CL1-204ENST00000565912 KRTAP4-4Q9BYR3 166 aa2.91□□□□□ -1.94
CX3CL1-204ENST00000565912 KRTAP4-12Q9BQ66 201 aa2.88□□□□□ -1.95
CX3CL1-204ENST00000565912 KRTAP4-2Q9BYR5 136 aa2.88□□□□□ -1.95
CX3CL1-204ENST00000565912 MDN1Q9NU22 5596 aa2.83□□□□□ -1.96
CX3CL1-204ENST00000565912 GPR98Q8WXG9 6306 aa2.83□□□□□ -1.96
CX3CL1-204ENST00000565912 KRTAP5-4Q6L8H1 288 aa2.81□□□□□ -1.96
CX3CL1-204ENST00000565912 KRTAP5-5Q701N2 237 aaPredicted RBP2.73□□□□□ -1.97
CX3CL1-204ENST00000565912 KRTAP5-3Q6L8H2 238 aa2.47□□□□□ -2.01
CX3CL1-204ENST00000565912 MUC5ACP98088 5654 aa2.41□□□□□ -2.02
CX3CL1-204ENST00000565912 KRTAP5-8O75690 187 aa2.29□□□□□ -2.04
CX3CL1-204ENST00000565912 HMCN1Q96RW7 5635 aa2.28□□□□□ -2.04
CX3CL1-204ENST00000565912 KRTAP5-2Q701N4 177 aa2.24□□□□□ -2.05
CX3CL1-204ENST00000565912 AHNAK2Q8IVF2 5795 aa2.23□□□□□ -2.05
CX3CL1-204ENST00000565912 PHGR1C9JFL3 82 aa2.15□□□□□ -2.07
CX3CL1-204ENST00000565912 KRTAP5-10Q6L8G5 202 aa2.12□□□□□ -2.07
CX3CL1-204ENST00000565912 KRTAP5-1Q6L8H4 278 aa1.99□□□□□ -2.09
CX3CL1-204ENST00000565912 MUC5BQ9HC84 5762 aaPredicted RBP1.98□□□□□ -2.09
CX3CL1-204ENST00000565912 KRTAP5-11Q6L8G4 156 aa1.95□□□□□ -2.1
CX3CL1-204ENST00000565912 AHNAKQ09666 5890 aaKnown RBP1.91□□□□□ -2.1
CX3CL1-204ENST00000565912 KRTAP5-7Q6L8G8 165 aa1.91□□□□□ -2.1
CX3CL1-204ENST00000565912 KRTAP21-2Q3LI59 83 aa1.88□□□□□ -2.11
CX3CL1-204ENST00000565912 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.74□□□□□ -2.13
CX3CL1-204ENST00000565912 KRTAP21-1Q3LI58 79 aa1.71□□□□□ -2.14
CX3CL1-204ENST00000565912 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 5.7 ms