RNA–Protein interactions for RNA: ENST00000560508.1

AP4E1-203, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best) BASIC

Gene AP4E1, Length 6,653 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-203ENST00000560508 LCE3EQ5T5B0 92 aa2.19□□□□□ -2.06
AP4E1-203ENST00000560508 FAT4Q6V0I7 4981 aa2.17□□□□□ -2.06
AP4E1-203ENST00000560508 LCE2AQ5TA79 106 aaPredicted RBP2.16□□□□□ -2.06
AP4E1-203ENST00000560508 KRTAP9-6A0A140TA67 174 aa2.15□□□□□ -2.06
AP4E1-203ENST00000560508 KRTAP9-2Q9BYQ4 174 aa2.15□□□□□ -2.07
AP4E1-203ENST00000560508 UBR4Q5T4S7 5183 aa2.14□□□□□ -2.07
AP4E1-203ENST00000560508 RNF213Q63HN8 5207 aa2.13□□□□□ -2.07
AP4E1-203ENST00000560508 LOC100996750A0A140TA64 210 aa2.12□□□□□ -2.07
AP4E1-203ENST00000560508 KRTAP19-7Q3SYF9 63 aa2.1□□□□□ -2.07
AP4E1-203ENST00000560508 KRTAP4-3Q9BYR4 195 aa2.1□□□□□ -2.07
AP4E1-203ENST00000560508 MT3P25713 68 aa2.1□□□□□ -2.07
AP4E1-203ENST00000560508 LCE1AQ5T7P2 110 aa2.09□□□□□ -2.07
AP4E1-203ENST00000560508 KRTAP6-3Q3LI67 103 aa2.07□□□□□ -2.08
AP4E1-203ENST00000560508 KRTAP2-3P0C7H8 128 aa2.06□□□□□ -2.08
AP4E1-203ENST00000560508 KRTAP2-4Q9BYR9 128 aa2.06□□□□□ -2.08
AP4E1-203ENST00000560508 KRTAP2-1Q9BYU5 128 aa2.06□□□□□ -2.08
AP4E1-203ENST00000560508 KRTAP20-1Q3LI63 56 aa2.06□□□□□ -2.08
AP4E1-203ENST00000560508 MT4P47944 62 aa2.05□□□□□ -2.08
AP4E1-203ENST00000560508 MT1AP04731 61 aa2.04□□□□□ -2.08
AP4E1-203ENST00000560508 PRM1P04553 51 aa2.03□□□□□ -2.09
AP4E1-203ENST00000560508 KRTAP9-7A8MTY7 169 aa1.99□□□□□ -2.09
AP4E1-203ENST00000560508 LCE4AQ5TA78 99 aa1.98□□□□□ -2.09
AP4E1-203ENST00000560508 LCE5AQ5TCM9 118 aa1.94□□□□□ -2.1
AP4E1-203ENST00000560508 KRTAP2-2Q9BYT5 123 aa1.93□□□□□ -2.1
AP4E1-203ENST00000560508 KRTAP9-6A8MVA2 160 aa1.92□□□□□ -2.1
AP4E1-203ENST00000560508 LCE1DQ5T752 114 aa1.92□□□□□ -2.1
AP4E1-203ENST00000560508 KRTAP4-9Q9BYQ8 210 aa1.92□□□□□ -2.1
AP4E1-203ENST00000560508 KRTAP9-4Q9BYQ2 154 aa1.92□□□□□ -2.1
AP4E1-203ENST00000560508 KRTAP6-1Q3LI64 71 aa1.91□□□□□ -2.1
AP4E1-203ENST00000560508 LCE1BQ5T7P3 118 aa1.91□□□□□ -2.1
AP4E1-203ENST00000560508 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.89□□□□□ -2.11
AP4E1-203ENST00000560508 USH2AO75445 5202 aa1.88□□□□□ -2.11
AP4E1-203ENST00000560508 KRTAP6-2Q3LI66 62 aa1.87□□□□□ -2.11
AP4E1-203ENST00000560508 SSPOA2VEC9 5147 aa1.78□□□□□ -2.13
AP4E1-203ENST00000560508 SYNE2Q8WXH0 6885 aaKnown RBP1.77□□□□□ -2.13
AP4E1-203ENST00000560508 KMT2DO14686 5537 aa1.76□□□□□ -2.13
AP4E1-203ENST00000560508 NEBP20929 6669 aa1.76□□□□□ -2.13
AP4E1-203ENST00000560508 KRTAP5-9P26371 169 aa1.72□□□□□ -2.13
AP4E1-203ENST00000560508 GPR98Q8WXG9 6306 aa1.72□□□□□ -2.13
AP4E1-203ENST00000560508 SYNE1Q8NF91 8797 aaKnown RBP1.71□□□□□ -2.13
AP4E1-203ENST00000560508 FSIP2Q5CZC0 6907 aa1.68□□□□□ -2.14
AP4E1-203ENST00000560508 KRTAP9-9Q9BYP9 154 aa1.67□□□□□ -2.14
AP4E1-203ENST00000560508 FCGBPQ9Y6R7 5405 aaPredicted RBP1.63□□□□□ -2.15
AP4E1-203ENST00000560508 MUC12Q9UKN1 5478 aa1.61□□□□□ -2.15
AP4E1-203ENST00000560508 LCE1CQ5T751 118 aa1.6□□□□□ -2.15
AP4E1-203ENST00000560508 LCE1EQ5T753 118 aa1.6□□□□□ -2.15
AP4E1-203ENST00000560508 LCE1FQ5T754 118 aa1.6□□□□□ -2.15
AP4E1-203ENST00000560508 KRTAP20-2Q3LI61 65 aa1.58□□□□□ -2.16
AP4E1-203ENST00000560508 KRTAP4-6Q9BYQ5 205 aa1.57□□□□□ -2.16
AP4E1-203ENST00000560508 OBSCNQ5VST9 7968 aa1.55□□□□□ -2.16
AP4E1-203ENST00000560508 KRTAP5-5Q701N2 237 aaPredicted RBP1.55□□□□□ -2.16
AP4E1-203ENST00000560508 KRTAP5-4Q6L8H1 288 aa1.54□□□□□ -2.16
AP4E1-203ENST00000560508 MDN1Q9NU22 5596 aa1.53□□□□□ -2.16
AP4E1-203ENST00000560508 DSTQ03001 7570 aaKnown RBP1.5□□□□□ -2.17
AP4E1-203ENST00000560508 AHNAK2Q8IVF2 5795 aa1.5□□□□□ -2.17
AP4E1-203ENST00000560508 KRTAP4-11Q9BYQ6 195 aa1.48□□□□□ -2.17
AP4E1-203ENST00000560508 MACF1Q9UPN3 7388 aaKnown RBP1.48□□□□□ -2.17
AP4E1-203ENST00000560508 HMCN1Q96RW7 5635 aa1.45□□□□□ -2.18
AP4E1-203ENST00000560508 KRTAP4-12Q9BQ66 201 aa1.37□□□□□ -2.19
AP4E1-203ENST00000560508 AHNAKQ09666 5890 aaKnown RBP1.34□□□□□ -2.2
AP4E1-203ENST00000560508 KRTAP4-4Q9BYR3 166 aa1.34□□□□□ -2.2
AP4E1-203ENST00000560508 KRTAP5-3Q6L8H2 238 aa1.33□□□□□ -2.2
AP4E1-203ENST00000560508 KRTAP4-2Q9BYR5 136 aa1.32□□□□□ -2.2
AP4E1-203ENST00000560508 MUC5ACP98088 5654 aa1.28□□□□□ -2.2
AP4E1-203ENST00000560508 KRTAP5-2Q701N4 177 aa1.28□□□□□ -2.2
AP4E1-203ENST00000560508 MUC19Q7Z5P9 8384 aa1.26□□□□□ -2.21
AP4E1-203ENST00000560508 MUC5BQ9HC84 5762 aaPredicted RBP1.21□□□□□ -2.22
AP4E1-203ENST00000560508 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.18□□□□□ -2.22
AP4E1-203ENST00000560508 KRTAP5-10Q6L8G5 202 aa1.18□□□□□ -2.22
AP4E1-203ENST00000560508 KRTAP5-8O75690 187 aa1.14□□□□□ -2.23
AP4E1-203ENST00000560508 KRTAP5-1Q6L8H4 278 aa1.08□□□□□ -2.24
AP4E1-203ENST00000560508 KRTAP5-11Q6L8G4 156 aa1.07□□□□□ -2.24
AP4E1-203ENST00000560508 PHGR1C9JFL3 82 aa1.04□□□□□ -2.24
AP4E1-203ENST00000560508 KRTAP5-7Q6L8G8 165 aa1.04□□□□□ -2.24
AP4E1-203ENST00000560508 KRTAP21-2Q3LI59 83 aa1.03□□□□□ -2.24
AP4E1-203ENST00000560508 KRTAP21-1Q3LI58 79 aa0.96□□□□□ -2.26
AP4E1-203ENST00000560508 MUC16Q8WXI7 14507 aa0.71□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 76.7 ms