RNA–Protein interactions for RNA: ENST00000559327.1

IGDCC4-204, Transcript of immunoglobulin superfamily DCC subclass member 4, humanhuman

TSL 1 (best)

Gene IGDCC4, Length 5,544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGDCC4-204ENST00000559327 LCE3EQ5T5B0 92 aa6.27□□□□□ -1.41
IGDCC4-204ENST00000559327 MT1MQ8N339 61 aa6.27□□□□□ -1.41
IGDCC4-204ENST00000559327 FAT4Q6V0I7 4981 aa6.1□□□□□ -1.43
IGDCC4-204ENST00000559327 MT3P25713 68 aa6.09□□□□□ -1.43
IGDCC4-204ENST00000559327 RNF213Q63HN8 5207 aa6.07□□□□□ -1.44
IGDCC4-204ENST00000559327 KRTAP9-6A0A140TA67 174 aa6.04□□□□□ -1.44
IGDCC4-204ENST00000559327 MT4P47944 62 aa6.03□□□□□ -1.44
IGDCC4-204ENST00000559327 LOC100996750A0A140TA64 210 aa5.97□□□□□ -1.45
IGDCC4-204ENST00000559327 KRTAP19-7Q3SYF9 63 aa5.97□□□□□ -1.45
IGDCC4-204ENST00000559327 KRTAP4-3Q9BYR4 195 aa5.96□□□□□ -1.46
IGDCC4-204ENST00000559327 UBR4Q5T4S7 5183 aa5.9□□□□□ -1.46
IGDCC4-204ENST00000559327 HMCN2Q8NDA2 5059 aa5.9□□□□□ -1.47
IGDCC4-204ENST00000559327 MT1AP04731 61 aa5.83□□□□□ -1.48
IGDCC4-204ENST00000559327 LCE1AQ5T7P2 110 aa5.73□□□□□ -1.49
IGDCC4-204ENST00000559327 KRTAP6-3Q3LI67 103 aa5.73□□□□□ -1.49
IGDCC4-204ENST00000559327 KRTAP20-1Q3LI63 56 aa5.7□□□□□ -1.5
IGDCC4-204ENST00000559327 FSIP2Q5CZC0 6907 aa5.69□□□□□ -1.5
IGDCC4-204ENST00000559327 KRTAP9-7A8MTY7 169 aa5.68□□□□□ -1.5
IGDCC4-204ENST00000559327 LCE1DQ5T752 114 aa5.68□□□□□ -1.5
IGDCC4-204ENST00000559327 LCE1BQ5T7P3 118 aa5.66□□□□□ -1.5
IGDCC4-204ENST00000559327 PRM1P04553 51 aa5.65□□□□□ -1.5
IGDCC4-204ENST00000559327 KRTAP2-3P0C7H8 128 aa5.61□□□□□ -1.51
IGDCC4-204ENST00000559327 KRTAP2-4Q9BYR9 128 aa5.61□□□□□ -1.51
IGDCC4-204ENST00000559327 KRTAP2-1Q9BYU5 128 aa5.61□□□□□ -1.51
IGDCC4-204ENST00000559327 MUC2Q02817 5179 aa5.55□□□□□ -1.52
IGDCC4-204ENST00000559327 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.53□□□□□ -1.52
IGDCC4-204ENST00000559327 LCE5AQ5TCM9 118 aa5.52□□□□□ -1.53
IGDCC4-204ENST00000559327 SYNE2Q8WXH0 6885 aaKnown RBP5.48□□□□□ -1.53
IGDCC4-204ENST00000559327 SYNE1Q8NF91 8797 aaKnown RBP5.46□□□□□ -1.54
IGDCC4-204ENST00000559327 LCE4AQ5TA78 99 aa5.44□□□□□ -1.54
IGDCC4-204ENST00000559327 KRTAP4-9Q9BYQ8 210 aa5.44□□□□□ -1.54
IGDCC4-204ENST00000559327 KRTAP6-1Q3LI64 71 aa5.4□□□□□ -1.54
IGDCC4-204ENST00000559327 KRTAP9-4Q9BYQ2 154 aa5.39□□□□□ -1.55
IGDCC4-204ENST00000559327 KRTAP2-2Q9BYT5 123 aa5.35□□□□□ -1.55
IGDCC4-204ENST00000559327 KRTAP6-2Q3LI66 62 aa5.34□□□□□ -1.56
IGDCC4-204ENST00000559327 KRTAP9-6A8MVA2 160 aa5.32□□□□□ -1.56
IGDCC4-204ENST00000559327 OBSCNQ5VST9 7968 aa5.1□□□□□ -1.59
IGDCC4-204ENST00000559327 USH2AO75445 5202 aa5.05□□□□□ -1.6
IGDCC4-204ENST00000559327 KRTAP5-9P26371 169 aa4.93□□□□□ -1.62
IGDCC4-204ENST00000559327 LCE1CQ5T751 118 aa4.8□□□□□ -1.64
IGDCC4-204ENST00000559327 LCE1EQ5T753 118 aa4.8□□□□□ -1.64
IGDCC4-204ENST00000559327 LCE1FQ5T754 118 aa4.8□□□□□ -1.64
IGDCC4-204ENST00000559327 NEBP20929 6669 aa4.74□□□□□ -1.65
IGDCC4-204ENST00000559327 MACF1Q9UPN3 7388 aaKnown RBP4.73□□□□□ -1.65
IGDCC4-204ENST00000559327 SSPOA2VEC9 5147 aa4.73□□□□□ -1.65
IGDCC4-204ENST00000559327 FCGBPQ9Y6R7 5405 aaPredicted RBP4.72□□□□□ -1.65
IGDCC4-204ENST00000559327 KRTAP9-9Q9BYP9 154 aa4.65□□□□□ -1.66
IGDCC4-204ENST00000559327 KMT2DO14686 5537 aa4.62□□□□□ -1.67
IGDCC4-204ENST00000559327 KRTAP20-2Q3LI61 65 aa4.55□□□□□ -1.68
IGDCC4-204ENST00000559327 KRTAP4-6Q9BYQ5 205 aa4.55□□□□□ -1.68
IGDCC4-204ENST00000559327 DSTQ03001 7570 aaKnown RBP4.52□□□□□ -1.69
IGDCC4-204ENST00000559327 MUC12Q9UKN1 5478 aa4.34□□□□□ -1.72
IGDCC4-204ENST00000559327 KRTAP5-4Q6L8H1 288 aa4.31□□□□□ -1.72
IGDCC4-204ENST00000559327 MDN1Q9NU22 5596 aa4.22□□□□□ -1.73
IGDCC4-204ENST00000559327 KRTAP4-11Q9BYQ6 195 aa4.14□□□□□ -1.75
IGDCC4-204ENST00000559327 KRTAP5-5Q701N2 237 aaPredicted RBP4.1□□□□□ -1.75
IGDCC4-204ENST00000559327 GPR98Q8WXG9 6306 aa3.93□□□□□ -1.78
IGDCC4-204ENST00000559327 KRTAP4-12Q9BQ66 201 aa3.92□□□□□ -1.78
IGDCC4-204ENST00000559327 KRTAP4-2Q9BYR5 136 aa3.92□□□□□ -1.78
IGDCC4-204ENST00000559327 KRTAP4-4Q9BYR3 166 aa3.9□□□□□ -1.79
IGDCC4-204ENST00000559327 MUC19Q7Z5P9 8384 aa3.87□□□□□ -1.79
IGDCC4-204ENST00000559327 KRTAP5-3Q6L8H2 238 aa3.75□□□□□ -1.81
IGDCC4-204ENST00000559327 MUC5ACP98088 5654 aa3.53□□□□□ -1.85
IGDCC4-204ENST00000559327 AHNAK2Q8IVF2 5795 aa3.43□□□□□ -1.86
IGDCC4-204ENST00000559327 KRTAP5-8O75690 187 aa3.41□□□□□ -1.86
IGDCC4-204ENST00000559327 KRTAP5-2Q701N4 177 aa3.4□□□□□ -1.86
IGDCC4-204ENST00000559327 HMCN1Q96RW7 5635 aa3.39□□□□□ -1.87
IGDCC4-204ENST00000559327 KRTAP5-10Q6L8G5 202 aa3.22□□□□□ -1.89
IGDCC4-204ENST00000559327 MUC5BQ9HC84 5762 aaPredicted RBP3.05□□□□□ -1.92
IGDCC4-204ENST00000559327 KRTAP5-11Q6L8G4 156 aa3.03□□□□□ -1.93
IGDCC4-204ENST00000559327 PHGR1C9JFL3 82 aa3□□□□□ -1.93
IGDCC4-204ENST00000559327 KRTAP5-1Q6L8H4 278 aa2.96□□□□□ -1.94
IGDCC4-204ENST00000559327 AHNAKQ09666 5890 aaKnown RBP2.86□□□□□ -1.95
IGDCC4-204ENST00000559327 KRTAP21-2Q3LI59 83 aa2.81□□□□□ -1.96
IGDCC4-204ENST00000559327 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.71□□□□□ -1.98
IGDCC4-204ENST00000559327 KRTAP5-7Q6L8G8 165 aa2.57□□□□□ -2
IGDCC4-204ENST00000559327 KRTAP21-1Q3LI58 79 aa2.43□□□□□ -2.02
IGDCC4-204ENST00000559327 MUC16Q8WXI7 14507 aa1.78□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 77.4 ms